RNA–Protein interactions for RNA: ENST00000309241.9

PPARGC1B-201, Transcript of PPARG coactivator 1 beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PPARGC1B, Length 10,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-201ENST00000309241 ARHGEF26Q96DR7 871 aa8.58□□□□□ -1.04
PPARGC1B-201ENST00000309241 USP44Q9H0E7 712 aa8.58□□□□□ -1.04
PPARGC1B-201ENST00000309241 MYLK2Q9H1R3 596 aa8.58□□□□□ -1.04
PPARGC1B-201ENST00000309241 GANQ9H2C0 597 aa8.58□□□□□ -1.04
PPARGC1B-201ENST00000309241 SPASTQ9UBP0 616 aa8.58□□□□□ -1.04
PPARGC1B-201ENST00000309241 ATPIF1Q9UII2 106 aa8.58□□□□□ -1.04
PPARGC1B-201ENST00000309241 TRIOBPQ9H2D6 2365 aa8.58□□□□□ -1.04
PPARGC1B-201ENST00000309241 DIDO1Q9BTC0 2240 aaKnown RBP8.58□□□□□ -1.04
PPARGC1B-201ENST00000309241 SMNDC1O75940 238 aaKnown RBP eCLIP8.58□□□□□ -1.04
PPARGC1B-201ENST00000309241 CYP2B6P20813 491 aa8.58□□□□□ -1.04
PPARGC1B-201ENST00000309241 PSMC5P62195 406 aa8.58□□□□□ -1.04
PPARGC1B-201ENST00000309241 MAD2L1Q13257 205 aaPredicted RBP8.58□□□□□ -1.04
PPARGC1B-201ENST00000309241 RUNDC3AQ59EK9 446 aa8.58□□□□□ -1.04
PPARGC1B-201ENST00000309241 SPANXN2Q5MJ10 180 aa8.58□□□□□ -1.04
PPARGC1B-201ENST00000309241 NUP93Q8N1F7 819 aa8.58□□□□□ -1.04
PPARGC1B-201ENST00000309241 AHCYL2Q96HN2 611 aaKnown RBP8.58□□□□□ -1.04
PPARGC1B-201ENST00000309241 CITED4Q96RK1 184 aa8.58□□□□□ -1.04
PPARGC1B-201ENST00000309241 C6orf62Q9GZU0 229 aaPredicted RBP8.58□□□□□ -1.04
PPARGC1B-201ENST00000309241 IARS2Q9NSE4 1012 aaKnown RBP8.58□□□□□ -1.04
PPARGC1B-201ENST00000309241 CNOT8Q9UFF9 292 aaKnown RBP8.58□□□□□ -1.04
PPARGC1B-201ENST00000309241 TUBE1Q9UJT0 475 aa8.58□□□□□ -1.04
PPARGC1B-201ENST00000309241 TRIM17Q9Y577 477 aa8.58□□□□□ -1.04
PPARGC1B-201ENST00000309241 RBM47A0AV96 593 aaKnown RBP8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 GSAPA4D1B5 854 aa8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 NCAM2O15394 837 aa8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 RAG1P15918 1043 aa8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 FDFT1P37268 417 aa8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 QARSP47897 775 aaKnown RBP8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 DCP1BQ8IZD4 617 aaKnown RBP8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 SCFD2Q8WU76 684 aa8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 PUS3Q9BZE2 481 aaKnown RBP8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 RSAD1Q9HA92 442 aa8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 ERAP1Q9NZ08 941 aa8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 DBR1Q9UK59 544 aaKnown RBP8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 ZNF335Q9H4Z2 1342 aaPredicted RBP8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 IRGMA1A4Y4 181 aa8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 DNAJC3Q13217 504 aa8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 DGUOKQ16854 277 aa8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 PCDHB12Q9Y5F1 795 aa8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 PCDHGA4Q9Y5G9 962 aa8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 TEX28O15482 410 aa8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 RGS20O76081 388 aa8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 SNRPAP09012 282 aaKnown RBP8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 PTPN12Q05209 780 aaKnown RBP8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 EN1Q05925 392 aaPredicted RBP8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 GNASQ5JWF2 1037 aa8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 PPP1R15BQ5SWA1 713 aa8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 RAD9BQ6WBX8 426 aa8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 CCDC33Q8N5R6 958 aa8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 SLC7A14Q8TBB6 771 aa8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 FAM45AQ8TCE6 357 aa8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 CINPQ9BW66 212 aaPredicted RBP8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 PRRC2BQ5JSZ5 2229 aaKnown RBP8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 CCL15-CCL14A0A0B4J2E2 113 aa8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 SRP72O76094 671 aaKnown RBP8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 RARGP13631 454 aa8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 GTF2E2P29084 291 aaKnown RBP8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 PTK6Q13882 451 aa8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 CCL15Q16663 113 aa8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 PIK3C3Q8NEB9 887 aa8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 ZNF512BQ96KM6 892 aaPredicted RBP8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 NUDT12Q9BQG2 462 aa8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 ERP44Q9BS26 406 aa8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 NEUROD4Q9HD90 331 aa8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 C3orf70A6NLC5 250 aaPredicted RBP8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 GTF2H1P32780 548 aa8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 THPOP40225 353 aa8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 PDIA6Q15084 440 aa8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 NCCRP1Q6ZVX7 275 aaPredicted RBP8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 PPM1NQ8N819 430 aa8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 AGBL1Q96MI9 1066 aa8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 C11orf70Q9BRQ4 267 aa8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 EME2A4GXA9 379 aaPredicted RBP8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 GAS2O43903 313 aaKnown RBP8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 VAV1P15498 845 aa8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 LRPAP1P30533 357 aa8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 TTMPQ5BVD1 217 aa8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 RBM43Q6ZSC3 357 aaKnown RBP8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 ZCCHC7Q8N3Z6 543 aaKnown RBP8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 SLC25A41Q8N5S1 370 aa8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 PGM2Q96G03 612 aa8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 MED15Q96RN5 788 aa8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 COL15A1P39059 1388 aa8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 TBC1D12O60347 775 aa8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 SNAP91O60641 907 aa8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 GH1P01241 217 aa8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 OR1G1P47890 313 aa8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 ZNF618Q5T7W0 954 aa8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 BICRALQ6AI39 1079 aa8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 CD302Q8IX05 232 aa8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 C20orf96Q9NUD7 363 aaPredicted RBP8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 HSPBP1Q9NZL4 362 aa8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 H3BMM5 538 aa8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 H7C4K7 107 aa8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 MATN2O00339 956 aa8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 RPL5P46777 297 aaKnown RBP8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 TMEM62Q0P6H9 643 aa8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 POLD3Q15054 466 aaPredicted RBP8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 DGKDQ16760 1214 aa8.57□□□□□ -1.04
PPARGC1B-201ENST00000309241 TRIM65Q6PJ69 517 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms