RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 KRT8P05787 483 aa10.84□□□□□ -0.67
MSRB3-201ENST00000308259 COL6A2P12110 1019 aa10.84□□□□□ -0.67
MSRB3-201ENST00000308259 EEF1B2P24534 225 aaKnown RBP10.84□□□□□ -0.67
MSRB3-201ENST00000308259 HOXA7P31268 230 aaPredicted RBP10.84□□□□□ -0.67
MSRB3-201ENST00000308259 DLG1Q12959 904 aa10.84□□□□□ -0.67
MSRB3-201ENST00000308259 C1orf220Q5T0J3 134 aa10.84□□□□□ -0.67
MSRB3-201ENST00000308259 LPAR1Q92633 364 aa10.84□□□□□ -0.67
MSRB3-201ENST00000308259 TEKT3Q9BXF9 490 aa10.84□□□□□ -0.67
MSRB3-201ENST00000308259 COL20A1Q9P218 1284 aa10.84□□□□□ -0.67
MSRB3-201ENST00000308259 TXNDC16Q9P2K2 825 aa10.84□□□□□ -0.67
MSRB3-201ENST00000308259 FEM1BQ9UK73 627 aa10.84□□□□□ -0.67
MSRB3-201ENST00000308259 CAPN8A6NHC0 703 aa10.84□□□□□ -0.67
MSRB3-201ENST00000308259 ZSCAN5BA6NJL1 495 aa10.84□□□□□ -0.67
MSRB3-201ENST00000308259 MEI4A8MW99 385 aa10.84□□□□□ -0.67
MSRB3-201ENST00000308259 NUDT17P0C025 328 aa10.84□□□□□ -0.67
MSRB3-201ENST00000308259 MYCLP12524 364 aaPredicted RBP10.84□□□□□ -0.67
MSRB3-201ENST00000308259 TAC1P20366 129 aa10.84□□□□□ -0.67
MSRB3-201ENST00000308259 HOXD10P28358 340 aa10.84□□□□□ -0.67
MSRB3-201ENST00000308259 BCAP31P51572 246 aa10.84□□□□□ -0.67
MSRB3-201ENST00000308259 OCA2Q04671 838 aa10.84□□□□□ -0.67
MSRB3-201ENST00000308259 MAPK11Q15759 364 aa10.84□□□□□ -0.67
MSRB3-201ENST00000308259 NDUFA5Q16718 116 aa10.84□□□□□ -0.67
MSRB3-201ENST00000308259 UGCGQ16739 394 aa10.84□□□□□ -0.67
MSRB3-201ENST00000308259 ZBED8Q8IZ13 594 aa10.84□□□□□ -0.67
MSRB3-201ENST00000308259 GMCL1P1Q8NEA9 526 aa10.84□□□□□ -0.67
MSRB3-201ENST00000308259 PPWD1Q96BP3 646 aaKnown RBP10.84□□□□□ -0.67
MSRB3-201ENST00000308259 HERPUD2Q9BSE4 406 aa10.84□□□□□ -0.67
MSRB3-201ENST00000308259 CHST7Q9NS84 486 aa10.84□□□□□ -0.67
MSRB3-201ENST00000308259 KLHL11Q9NVR0 708 aa10.84□□□□□ -0.67
MSRB3-201ENST00000308259 MKS1Q9NXB0 559 aa10.84□□□□□ -0.67
MSRB3-201ENST00000308259 GIT1Q9Y2X7 761 aa10.84□□□□□ -0.67
MSRB3-201ENST00000308259 PSMD11O00231 422 aa10.84□□□□□ -0.67
MSRB3-201ENST00000308259 ZNF862O60290 1169 aa10.84□□□□□ -0.67
MSRB3-201ENST00000308259 FAM58BPP0C7Q3 252 aa10.84□□□□□ -0.67
MSRB3-201ENST00000308259 RARGP13631 454 aa10.84□□□□□ -0.67
MSRB3-201ENST00000308259 ANKRD20A4Q4UJ75 823 aa10.84□□□□□ -0.67
MSRB3-201ENST00000308259 OGFOD2Q6N063 350 aa10.84□□□□□ -0.67
MSRB3-201ENST00000308259 TUBA3EQ6PEY2 450 aa10.84□□□□□ -0.67
MSRB3-201ENST00000308259 RNF207Q6ZRF8 634 aa10.84□□□□□ -0.67
MSRB3-201ENST00000308259 RAPH1Q70E73 1250 aa10.84□□□□□ -0.67
MSRB3-201ENST00000308259 GPR141Q7Z602 305 aa10.84□□□□□ -0.67
MSRB3-201ENST00000308259 LDHDQ86WU2 507 aa10.84□□□□□ -0.67
MSRB3-201ENST00000308259 GALNT6Q8NCL4 622 aa10.84□□□□□ -0.67
MSRB3-201ENST00000308259 EPS8L1Q8TE68 723 aa10.84□□□□□ -0.67
MSRB3-201ENST00000308259 TSSK1BQ9BXA7 367 aa10.84□□□□□ -0.67
MSRB3-201ENST00000308259 PLEKHA5Q9HAU0 1116 aa10.84□□□□□ -0.67
MSRB3-201ENST00000308259 KCNH7Q9NS40 1196 aa10.84□□□□□ -0.67
MSRB3-201ENST00000308259 KRT82Q9NSB4 513 aa10.84□□□□□ -0.67
MSRB3-201ENST00000308259 EIF2AK2P19525 551 aaKnown RBP10.83□□□□□ -0.68
MSRB3-201ENST00000308259 YARSP54577 528 aaKnown RBP10.83□□□□□ -0.68
MSRB3-201ENST00000308259 SPP2Q13103 211 aa10.83□□□□□ -0.68
MSRB3-201ENST00000308259 DHX34Q14147 1143 aaKnown RBP10.83□□□□□ -0.68
MSRB3-201ENST00000308259 SGO2Q562F6 1265 aa10.83□□□□□ -0.68
MSRB3-201ENST00000308259 SAMD7Q7Z3H4 446 aa10.83□□□□□ -0.68
MSRB3-201ENST00000308259 CLNKQ7Z7G1 428 aa10.83□□□□□ -0.68
MSRB3-201ENST00000308259 AMIGO2Q86SJ2 522 aa10.83□□□□□ -0.68
MSRB3-201ENST00000308259 PASD1Q8IV76 773 aa10.83□□□□□ -0.68
MSRB3-201ENST00000308259 EIF1ADQ8N9N8 165 aaKnown RBP10.83□□□□□ -0.68
MSRB3-201ENST00000308259 DIS3LQ8TF46 1054 aaKnown RBP10.83□□□□□ -0.68
MSRB3-201ENST00000308259 ZC3H15Q8WU90 426 aaKnown RBP10.83□□□□□ -0.68
MSRB3-201ENST00000308259 CPA5Q8WXQ8 436 aa10.83□□□□□ -0.68
MSRB3-201ENST00000308259 STARD8Q92502 1023 aa10.83□□□□□ -0.68
MSRB3-201ENST00000308259 MRPL40Q9NQ50 206 aaKnown RBP10.83□□□□□ -0.68
MSRB3-201ENST00000308259 RPL26L1Q9UNX3 145 aaKnown RBP10.83□□□□□ -0.68
MSRB3-201ENST00000308259 MYPNQ86TC9 1320 aa10.83□□□□□ -0.68
MSRB3-201ENST00000308259 FUOMA2VDF0 154 aa10.83□□□□□ -0.68
MSRB3-201ENST00000308259 CFAP99D6REC4 459 aa10.83□□□□□ -0.68
MSRB3-201ENST00000308259 J3QRK9 145 aa10.83□□□□□ -0.68
MSRB3-201ENST00000308259 GABBR2O75899 941 aa10.83□□□□□ -0.68
MSRB3-201ENST00000308259 COILP38432 576 aaPredicted RBP10.83□□□□□ -0.68
MSRB3-201ENST00000308259 TRPC1P48995 793 aa10.83□□□□□ -0.68
MSRB3-201ENST00000308259 CMPK2Q5EBM0 449 aa10.83□□□□□ -0.68
MSRB3-201ENST00000308259 RSPH3Q86UC2 560 aa10.83□□□□□ -0.68
MSRB3-201ENST00000308259 FBXL8Q96CD0 374 aa10.83□□□□□ -0.68
MSRB3-201ENST00000308259 WNK4Q96J92 1243 aa10.83□□□□□ -0.68
MSRB3-201ENST00000308259 KIAA1586Q9HCI6 787 aa10.83□□□□□ -0.68
MSRB3-201ENST00000308259 NAALADL1Q9UQQ1 740 aa10.83□□□□□ -0.68
MSRB3-201ENST00000308259 CCDC195A0A1B0GUA6 201 aa10.83□□□□□ -0.68
MSRB3-201ENST00000308259 SOCS7O14512 581 aa10.83□□□□□ -0.68
MSRB3-201ENST00000308259 PFDN6O15212 129 aa10.83□□□□□ -0.68
MSRB3-201ENST00000308259 PEX2P28328 305 aa10.83□□□□□ -0.68
MSRB3-201ENST00000308259 TPTEP56180 551 aa10.83□□□□□ -0.68
MSRB3-201ENST00000308259 SNAPC2Q13487 334 aa10.83□□□□□ -0.68
MSRB3-201ENST00000308259 MTM1Q13496 603 aa10.83□□□□□ -0.68
MSRB3-201ENST00000308259 HAUS6Q7Z4H7 955 aa10.83□□□□□ -0.68
MSRB3-201ENST00000308259 DHDDSQ86SQ9 333 aa10.83□□□□□ -0.68
MSRB3-201ENST00000308259 PRPF39Q86UA1 669 aaKnown RBP10.83□□□□□ -0.68
MSRB3-201ENST00000308259 SLC13A5Q86YT5 568 aaPredicted RBP10.83□□□□□ -0.68
MSRB3-201ENST00000308259 RHOT2Q8IXI1 618 aa10.83□□□□□ -0.68
MSRB3-201ENST00000308259 TAS1R2Q8TE23 839 aa10.83□□□□□ -0.68
MSRB3-201ENST00000308259 OSBPL6Q9BZF3 934 aa10.83□□□□□ -0.68
MSRB3-201ENST00000308259 TRPV5Q9NQA5 729 aa10.83□□□□□ -0.68
MSRB3-201ENST00000308259 RAG1P15918 1043 aa10.83□□□□□ -0.68
MSRB3-201ENST00000308259 KRT17Q04695 432 aa10.83□□□□□ -0.68
MSRB3-201ENST00000308259 SMU1Q2TAY7 513 aa10.83□□□□□ -0.68
MSRB3-201ENST00000308259 ANKDD1AQ495B1 522 aa10.83□□□□□ -0.68
MSRB3-201ENST00000308259 DNAL1Q4LDG9 190 aa10.83□□□□□ -0.68
MSRB3-201ENST00000308259 PCNX4Q63HM2 1172 aa10.83□□□□□ -0.68
MSRB3-201ENST00000308259 ELMSAN1Q6PJG2 1045 aa10.83□□□□□ -0.68
MSRB3-201ENST00000308259 DPP9Q86TI2 863 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms