RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 GTF2A1P52655 376 aaPredicted RBP11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 GRIK3Q13003 919 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 MTFR1Q15390 333 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 SLC45A4Q5BKX6 768 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 BRSK2Q8IWQ3 736 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 MTMR14Q8NCE2 650 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 HES6Q96HZ4 224 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 RAD18Q9NS91 495 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 UBP1Q9NZI7 540 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 NCF1BA6NI72 391 aaPredicted RBP11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 NCF1CA8MVU1 366 aaPredicted RBP11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 NDUFB5O43674 189 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 NCF1P14598 390 aaPredicted RBP11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 THOP1P52888 689 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 BTKQ06187 659 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 PRKAA1Q13131 559 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 TRADDQ15628 312 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 EARS2Q5JPH6 523 aaKnown RBP11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 SERAC1Q96JX3 654 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 KCTD10Q9H3F6 313 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 RRN3Q9NYV6 651 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 VANGL2Q9ULK5 521 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 TRAF3IP3Q9Y228 551 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 SMIM35A0A1B0GVV1 85 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 BRAFP15056 766 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 ITGALP20701 1170 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 CYP2F1P24903 491 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 C21orf59P57076 290 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 POU4F1Q01851 419 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 FPGSQ05932 587 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 KRT72Q14CN4 511 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 GPR152Q8TDT2 470 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 BTBD7Q9P203 1132 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 SFMBT1Q9UHJ3 866 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 MYH2Q9UKX2 1941 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 PHF20L1A8MW92 1017 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 RBAK-RBAKDNI3L0D1 243 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 ZSCAN9O15535 394 aaPredicted RBP11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 DCTN3O75935 186 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 PARNO95453 639 aaKnown RBP11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 CYP2A6P11509 494 aaPredicted RBP11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 RPL9P32969 192 aaKnown RBP11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 ZNF280AP59817 542 aaPredicted RBP11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 HPCAP84074 193 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 GRIN3AQ8TCU5 1115 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 MIPOL1Q8TD10 442 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 SYN2Q92777 582 aaPredicted RBP11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 ABHD8Q96I13 439 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 FAM161BQ96MY7 647 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 ACO2Q99798 780 aaKnown RBP11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 ELAC2Q9BQ52 826 aaKnown RBP11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 PSD3Q9NYI0 1048 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 SMARCAL1Q9NZC9 954 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 ANKRD63C9JTQ0 380 aa11.05□□□□□ -0.64
SYNPO2-201ENST00000307142 SETMARQ53H47 684 aaPredicted RBP11.05□□□□□ -0.64
SYNPO2-201ENST00000307142 COL1A2P08123 1366 aa11.05□□□□□ -0.64
SYNPO2-201ENST00000307142 FSTL1Q12841 308 aa11.05□□□□□ -0.64
SYNPO2-201ENST00000307142 MARC1Q5VT66 337 aa11.05□□□□□ -0.64
SYNPO2-201ENST00000307142 ANKS6Q68DC2 871 aa11.05□□□□□ -0.64
SYNPO2-201ENST00000307142 ZDHHC17Q8IUH5 632 aa11.05□□□□□ -0.64
SYNPO2-201ENST00000307142 MTBPQ96DY7 904 aa11.05□□□□□ -0.64
SYNPO2-201ENST00000307142 TKTL2Q9H0I9 626 aa11.05□□□□□ -0.64
SYNPO2-201ENST00000307142 TRMT13Q9NUP7 481 aaKnown RBP11.05□□□□□ -0.64
SYNPO2-201ENST00000307142 TBL1XO60907 577 aa11.05□□□□□ -0.64
SYNPO2-201ENST00000307142 JCHAINP01591 159 aa11.05□□□□□ -0.64
SYNPO2-201ENST00000307142 NFICP08651 508 aa11.05□□□□□ -0.64
SYNPO2-201ENST00000307142 CD44P16070 742 aaKnown RBP11.05□□□□□ -0.64
SYNPO2-201ENST00000307142 ARL8AQ96BM9 186 aa11.05□□□□□ -0.64
SYNPO2-201ENST00000307142 MED8Q96G25 268 aa11.05□□□□□ -0.64
SYNPO2-201ENST00000307142 CYTH2Q99418 400 aa11.05□□□□□ -0.64
SYNPO2-201ENST00000307142 MOXD2PA6NHM9 499 aa11.05□□□□□ -0.64
SYNPO2-201ENST00000307142 PDZK1P1A8MUH7 402 aa11.05□□□□□ -0.64
SYNPO2-201ENST00000307142 TRDMT1O14717 391 aaKnown RBP11.05□□□□□ -0.64
SYNPO2-201ENST00000307142 MGEA5O60502 916 aa11.05□□□□□ -0.64
SYNPO2-201ENST00000307142 EVX2Q03828 476 aa11.05□□□□□ -0.64
SYNPO2-201ENST00000307142 BCL2L1Q07817 233 aa11.05□□□□□ -0.64
SYNPO2-201ENST00000307142 TMEM119Q4V9L6 283 aa11.05□□□□□ -0.64
SYNPO2-201ENST00000307142 TTC39BQ5VTQ0 682 aaPredicted RBP11.05□□□□□ -0.64
SYNPO2-201ENST00000307142 MAB21L3Q8N8X9 362 aa11.05□□□□□ -0.64
SYNPO2-201ENST00000307142 LRRC37BQ96QE4 947 aa11.05□□□□□ -0.64
SYNPO2-201ENST00000307142 RNPEPQ9H4A4 650 aa11.05□□□□□ -0.64
SYNPO2-201ENST00000307142 RBM22Q9NW64 420 aaKnown RBP eCLIP11.05□□□□□ -0.64
SYNPO2-201ENST00000307142 GTF3C4Q9UKN8 822 aa11.05□□□□□ -0.64
SYNPO2-201ENST00000307142 DYRK1BQ9Y463 629 aa11.05□□□□□ -0.64
SYNPO2-201ENST00000307142 RIPK3Q9Y572 518 aa11.05□□□□□ -0.64
SYNPO2-201ENST00000307142 CSH1P0DML2 217 aa11.05□□□□□ -0.64
SYNPO2-201ENST00000307142 CSH2P0DML3 217 aa11.05□□□□□ -0.64
SYNPO2-201ENST00000307142 PCNAP12004 261 aa11.05□□□□□ -0.64
SYNPO2-201ENST00000307142 RARGP13631 454 aa11.05□□□□□ -0.64
SYNPO2-201ENST00000307142 ITIH2P19823 946 aa11.05□□□□□ -0.64
SYNPO2-201ENST00000307142 CENPCQ03188 943 aa11.05□□□□□ -0.64
SYNPO2-201ENST00000307142 PPIL6Q8IXY8 311 aa11.05□□□□□ -0.64
SYNPO2-201ENST00000307142 NUP93Q8N1F7 819 aa11.05□□□□□ -0.64
SYNPO2-201ENST00000307142 CXorf40AQ8TE69 158 aa11.05□□□□□ -0.64
SYNPO2-201ENST00000307142 NDOR1Q9UHB4 597 aa11.05□□□□□ -0.64
SYNPO2-201ENST00000307142 SNX12Q9UMY4 172 aa11.05□□□□□ -0.64
SYNPO2-201ENST00000307142 PCDHB9Q9Y5E1 797 aa11.05□□□□□ -0.64
SYNPO2-201ENST00000307142 FOXP2O15409 715 aa11.04□□□□□ -0.64
SYNPO2-201ENST00000307142 MTA2O94776 668 aa11.04□□□□□ -0.64
SYNPO2-201ENST00000307142 RFX3P48380 749 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms