RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 PTTG2Q9NZH5 202 aa13.49□□□□□ -0.25
TRIM35-201ENST00000305364 BCORQ6W2J9 1755 aa13.49□□□□□ -0.25
TRIM35-201ENST00000305364 TCRBV7S3A2A0A539 114 aa13.49□□□□□ -0.25
TRIM35-201ENST00000305364 TMEM63AO94886 807 aa13.49□□□□□ -0.25
TRIM35-201ENST00000305364 ASLP04424 464 aa13.49□□□□□ -0.25
TRIM35-201ENST00000305364 TM4SF1P30408 202 aa13.49□□□□□ -0.25
TRIM35-201ENST00000305364 TKFCQ3LXA3 575 aa13.49□□□□□ -0.25
TRIM35-201ENST00000305364 TXNRD3NBQ6F5E7 133 aa13.49□□□□□ -0.25
TRIM35-201ENST00000305364 PLEKHA7Q6IQ23 1121 aa13.49□□□□□ -0.25
TRIM35-201ENST00000305364 C16orf89Q6UX73 402 aa13.49□□□□□ -0.25
TRIM35-201ENST00000305364 NPNTQ6UXI9 565 aa13.49□□□□□ -0.25
TRIM35-201ENST00000305364 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.49□□□□□ -0.25
TRIM35-201ENST00000305364 MKL1Q969V6 931 aa13.49□□□□□ -0.25
TRIM35-201ENST00000305364 MAML3Q96JK9 1138 aa13.49□□□□□ -0.25
TRIM35-201ENST00000305364 HEXIM2Q96MH2 286 aaKnown RBP13.49□□□□□ -0.25
TRIM35-201ENST00000305364 C7orf26Q96N11 449 aa13.49□□□□□ -0.25
TRIM35-201ENST00000305364 TBC1D23Q9NUY8 699 aa13.49□□□□□ -0.25
TRIM35-201ENST00000305364 PKNOX1P55347 436 aa13.49□□□□□ -0.25
TRIM35-201ENST00000305364 ORC1Q13415 861 aa13.49□□□□□ -0.25
TRIM35-201ENST00000305364 GEN1Q17RS7 908 aa13.49□□□□□ -0.25
TRIM35-201ENST00000305364 TMCO4Q5TGY1 634 aa13.49□□□□□ -0.25
TRIM35-201ENST00000305364 DNAAF3Q8N9W5 541 aa13.49□□□□□ -0.25
TRIM35-201ENST00000305364 TMEM161BQ8NDZ6 487 aa13.49□□□□□ -0.25
TRIM35-201ENST00000305364 FIZ1Q96SL8 496 aa13.49□□□□□ -0.25
TRIM35-201ENST00000305364 TMEM191CA6NGB0 347 aa13.48□□□□□ -0.25
TRIM35-201ENST00000305364 RALBP11234 206 aa13.48□□□□□ -0.25
TRIM35-201ENST00000305364 ADRA2BP18089 450 aa13.48□□□□□ -0.25
TRIM35-201ENST00000305364 NRF1Q16656 503 aa13.48□□□□□ -0.25
TRIM35-201ENST00000305364 PHF13Q86YI8 300 aaPredicted RBP13.48□□□□□ -0.25
TRIM35-201ENST00000305364 LRRC43Q8N309 656 aa13.48□□□□□ -0.25
TRIM35-201ENST00000305364 DDX1Q92499 740 aaKnown RBP13.48□□□□□ -0.25
TRIM35-201ENST00000305364 DCUN1D1Q96GG9 259 aa13.48□□□□□ -0.25
TRIM35-201ENST00000305364 GJD4Q96KN9 370 aaPredicted RBP13.48□□□□□ -0.25
TRIM35-201ENST00000305364 CDRT15Q96T59 188 aa13.48□□□□□ -0.25
TRIM35-201ENST00000305364 CDH22Q9UJ99 828 aa13.48□□□□□ -0.25
TRIM35-201ENST00000305364 SH3BP1Q9Y3L3 701 aa13.48□□□□□ -0.25
TRIM35-201ENST00000305364 KPNA7A9QM74 516 aa13.48□□□□□ -0.25
TRIM35-201ENST00000305364 M0QYV0 167 aa13.48□□□□□ -0.25
TRIM35-201ENST00000305364 PSAPP07602 524 aa13.48□□□□□ -0.25
TRIM35-201ENST00000305364 VIL1P09327 827 aaKnown RBP13.48□□□□□ -0.25
TRIM35-201ENST00000305364 PDGFRAP16234 1089 aa13.48□□□□□ -0.25
TRIM35-201ENST00000305364 NELFEP18615 380 aaKnown RBP13.48□□□□□ -0.25
TRIM35-201ENST00000305364 NLRP11P59045 1033 aaKnown RBP13.48□□□□□ -0.25
TRIM35-201ENST00000305364 CTC1Q2NKJ3 1217 aa13.48□□□□□ -0.25
TRIM35-201ENST00000305364 BNC2Q6ZN30 1099 aaPredicted RBP13.48□□□□□ -0.25
TRIM35-201ENST00000305364 LRRN4Q8WUT4 740 aa13.48□□□□□ -0.25
TRIM35-201ENST00000305364 SORCS3Q9UPU3 1222 aa13.48□□□□□ -0.25
TRIM35-201ENST00000305364 ARHGEF37A1IGU5 675 aa13.48□□□□□ -0.25
TRIM35-201ENST00000305364 APOL1O14791 398 aa13.48□□□□□ -0.25
TRIM35-201ENST00000305364 GLRA3O75311 464 aa13.48□□□□□ -0.25
TRIM35-201ENST00000305364 GARTP22102 1010 aa13.48□□□□□ -0.25
TRIM35-201ENST00000305364 KDELR1P24390 212 aa13.48□□□□□ -0.25
TRIM35-201ENST00000305364 EEF1B2P24534 225 aaKnown RBP13.48□□□□□ -0.25
TRIM35-201ENST00000305364 CDKN2BP42772 138 aa13.48□□□□□ -0.25
TRIM35-201ENST00000305364 WASHC5Q12768 1159 aa13.48□□□□□ -0.25
TRIM35-201ENST00000305364 PDSS2Q86YH6 399 aa13.48□□□□□ -0.25
TRIM35-201ENST00000305364 PQLC1Q8N2U9 271 aa13.48□□□□□ -0.25
TRIM35-201ENST00000305364 GMCL1P1Q8NEA9 526 aa13.48□□□□□ -0.25
TRIM35-201ENST00000305364 PGBD4Q96DM1 585 aa13.48□□□□□ -0.25
TRIM35-201ENST00000305364 MMP19Q99542 508 aa13.48□□□□□ -0.25
TRIM35-201ENST00000305364 DNAJB4Q9UDY4 337 aa13.48□□□□□ -0.25
TRIM35-201ENST00000305364 TLK1Q9UKI8 766 aa13.48□□□□□ -0.25
TRIM35-201ENST00000305364 CDY2AQ9Y6F7 541 aa13.48□□□□□ -0.25
TRIM35-201ENST00000305364 CDY1Q9Y6F8 540 aa13.48□□□□□ -0.25
TRIM35-201ENST00000305364 SYNJ2BP-COX16A0A087WUM0 186 aa13.47□□□□□ -0.25
TRIM35-201ENST00000305364 DGAT1O75907 488 aa13.47□□□□□ -0.25
TRIM35-201ENST00000305364 PABPC4LP0CB38 370 aaKnown RBP13.47□□□□□ -0.25
TRIM35-201ENST00000305364 ADSSP30520 456 aa13.47□□□□□ -0.25
TRIM35-201ENST00000305364 LRRC38Q5VT99 294 aa13.47□□□□□ -0.25
TRIM35-201ENST00000305364 TRIM50Q86XT4 487 aa13.47□□□□□ -0.25
TRIM35-201ENST00000305364 CCNYL1Q8N7R7 359 aa13.47□□□□□ -0.25
TRIM35-201ENST00000305364 COX16Q9P0S2 106 aa13.47□□□□□ -0.25
TRIM35-201ENST00000305364 SPATA31A1Q5TZJ5 1347 aa13.47□□□□□ -0.25
TRIM35-201ENST00000305364 E5RJQ4 531 aa13.47□□□□□ -0.25
TRIM35-201ENST00000305364 TP73O15350 636 aa13.47□□□□□ -0.25
TRIM35-201ENST00000305364 APOEP02649 317 aa13.47□□□□□ -0.25
TRIM35-201ENST00000305364 NPR1P16066 1061 aa13.47□□□□□ -0.25
TRIM35-201ENST00000305364 NADK2Q4G0N4 442 aa13.47□□□□□ -0.25
TRIM35-201ENST00000305364 ZNF667Q5HYK9 610 aa13.47□□□□□ -0.25
TRIM35-201ENST00000305364 C1orf220Q5T0J3 134 aa13.47□□□□□ -0.25
TRIM35-201ENST00000305364 HEATR6Q6AI08 1181 aaKnown RBP13.47□□□□□ -0.25
TRIM35-201ENST00000305364 ANKRD36BP1Q96IX9 119 aa13.47□□□□□ -0.25
TRIM35-201ENST00000305364 FRMD8P1Q9BZ68 369 aaPredicted RBP13.47□□□□□ -0.25
TRIM35-201ENST00000305364 ANKEF1Q9NU02 776 aa13.47□□□□□ -0.25
TRIM35-201ENST00000305364 PIH1D1Q9NWS0 290 aaKnown RBP13.47□□□□□ -0.25
TRIM35-201ENST00000305364 KANSL3Q9P2N6 904 aa13.47□□□□□ -0.25
TRIM35-201ENST00000305364 POMPQ9Y244 141 aa13.47□□□□□ -0.25
TRIM35-201ENST00000305364 AK5Q9Y6K8 562 aa13.47□□□□□ -0.25
TRIM35-201ENST00000305364 PLIN4Q96Q06 1357 aa13.47□□□□□ -0.25
TRIM35-201ENST00000305364 RNF103-CHMP3A0A140T963 221 aa13.47□□□□□ -0.25
TRIM35-201ENST00000305364 BPGMP07738 259 aa13.47□□□□□ -0.25
TRIM35-201ENST00000305364 ITGB5P18084 799 aa13.47□□□□□ -0.25
TRIM35-201ENST00000305364 TDRD10Q5VZ19 366 aaKnown RBP13.47□□□□□ -0.25
TRIM35-201ENST00000305364 APOBEC3HQ6NTF7 200 aaKnown RBP13.47□□□□□ -0.25
TRIM35-201ENST00000305364 DPY19L2Q6NUT2 758 aa13.47□□□□□ -0.25
TRIM35-201ENST00000305364 CERS5Q8N5B7 392 aa13.47□□□□□ -0.25
TRIM35-201ENST00000305364 OCEL1Q9H607 264 aa13.47□□□□□ -0.25
TRIM35-201ENST00000305364 PNPOQ9NVS9 261 aa13.47□□□□□ -0.25
TRIM35-201ENST00000305364 GPATCH2LQ9NWQ4 482 aa13.47□□□□□ -0.25
TRIM35-201ENST00000305364 DOCK2Q92608 1830 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms