RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 CREBRFQ8IUR6 639 aa27.79■■■□□ 2.04
CDKN2A-201ENST00000304494 RPLP0P6Q8NHW5 317 aa27.79■■■□□ 2.04
CDKN2A-201ENST00000304494 EZH1Q92800 747 aaPredicted RBP27.79■■■□□ 2.04
CDKN2A-201ENST00000304494 ACDQ96AP0 544 aa27.79■■■□□ 2.04
CDKN2A-201ENST00000304494 HINFPQ9BQA5 517 aa27.79■■■□□ 2.04
CDKN2A-201ENST00000304494 LRRC4Q9HBW1 653 aa27.79■■■□□ 2.04
CDKN2A-201ENST00000304494 DACH1Q9UI36 760 aa27.79■■■□□ 2.04
CDKN2A-201ENST00000304494 PALM2-AKAP2B1ALY0 433 aaPredicted RBP27.78■■■□□ 2.04
CDKN2A-201ENST00000304494 FNTBP49356 437 aa27.78■■■□□ 2.04
CDKN2A-201ENST00000304494 TPD52L1Q16890 204 aaPredicted RBP27.78■■■□□ 2.04
CDKN2A-201ENST00000304494 LY6G5CQ5SRR4 150 aa27.78■■■□□ 2.04
CDKN2A-201ENST00000304494 BTBD8Q5XKL5 378 aa27.78■■■□□ 2.04
CDKN2A-201ENST00000304494 LCLAT1Q6UWP7 414 aa27.78■■■□□ 2.04
CDKN2A-201ENST00000304494 ARHGEF19Q8IW93 802 aa27.78■■■□□ 2.04
CDKN2A-201ENST00000304494 KAT5Q92993 513 aa27.78■■■□□ 2.04
CDKN2A-201ENST00000304494 PNKPQ96T60 521 aa27.78■■■□□ 2.04
CDKN2A-201ENST00000304494 SPHK2Q9NRA0 654 aa27.78■■■□□ 2.04
CDKN2A-201ENST00000304494 NUDT5Q9UKK9 219 aa27.78■■■□□ 2.04
CDKN2A-201ENST00000304494 SMG5Q9UPR3 1016 aaKnown RBP27.78■■■□□ 2.04
CDKN2A-201ENST00000304494 HOXC11O43248 304 aaPredicted RBP27.77■■■□□ 2.04
CDKN2A-201ENST00000304494 ZBED1O96006 694 aa27.77■■■□□ 2.04
CDKN2A-201ENST00000304494 YWHAGP61981 247 aaKnown RBP eCLIP27.77■■■□□ 2.04
CDKN2A-201ENST00000304494 DMWDQ09019 674 aa27.77■■■□□ 2.04
CDKN2A-201ENST00000304494 PREPLQ4J6C6 727 aaPredicted RBP27.77■■■□□ 2.04
CDKN2A-201ENST00000304494 PM20D1Q6GTS8 502 aa27.77■■■□□ 2.04
CDKN2A-201ENST00000304494 RBBP8NLQ8NC74 664 aaPredicted RBP27.77■■■□□ 2.04
CDKN2A-201ENST00000304494 UBA3Q8TBC4 463 aa27.77■■■□□ 2.04
CDKN2A-201ENST00000304494 SECISBP2LQ93073 1101 aaKnown RBP27.77■■■□□ 2.04
CDKN2A-201ENST00000304494 GBP4Q96PP9 640 aa27.77■■■□□ 2.04
CDKN2A-201ENST00000304494 MED15Q96RN5 788 aa27.77■■■□□ 2.04
CDKN2A-201ENST00000304494 RAB23Q9ULC3 237 aa27.77■■■□□ 2.04
CDKN2A-201ENST00000304494 TULP2O00295 520 aa27.76■■■□□ 2.03
CDKN2A-201ENST00000304494 MDM4O15151 490 aa27.76■■■□□ 2.03
CDKN2A-201ENST00000304494 GREM1O60565 184 aa27.76■■■□□ 2.03
CDKN2A-201ENST00000304494 CNGA2Q16280 664 aa27.76■■■□□ 2.03
CDKN2A-201ENST00000304494 HEATR6Q6AI08 1181 aaKnown RBP27.76■■■□□ 2.03
CDKN2A-201ENST00000304494 RSRC2Q7L4I2 434 aaKnown RBP27.76■■■□□ 2.03
CDKN2A-201ENST00000304494 SYT13Q7L8C5 426 aa27.76■■■□□ 2.03
CDKN2A-201ENST00000304494 WDR5BQ86VZ2 330 aa27.76■■■□□ 2.03
CDKN2A-201ENST00000304494 MIB1Q86YT6 1006 aa27.76■■■□□ 2.03
CDKN2A-201ENST00000304494 CAMKK1Q8N5S9 505 aa27.76■■■□□ 2.03
CDKN2A-201ENST00000304494 KCTD13Q8WZ19 329 aa27.76■■■□□ 2.03
CDKN2A-201ENST00000304494 WBP2Q969T9 261 aa27.76■■■□□ 2.03
CDKN2A-201ENST00000304494 FAM81BQ96LP2 452 aa27.76■■■□□ 2.03
CDKN2A-201ENST00000304494 IPO9Q96P70 1041 aaKnown RBP27.76■■■□□ 2.03
CDKN2A-201ENST00000304494 ULBP1Q9BZM6 244 aa27.76■■■□□ 2.03
CDKN2A-201ENST00000304494 LMBRD1Q9NUN5 540 aa27.76■■■□□ 2.03
CDKN2A-201ENST00000304494 WDR3Q9UNX4 943 aaKnown RBP eCLIP27.76■■■□□ 2.03
CDKN2A-201ENST00000304494 CCDC163A0A0D9SF12 145 aa27.75■■■□□ 2.03
CDKN2A-201ENST00000304494 K7EQS6 105 aa27.75■■■□□ 2.03
CDKN2A-201ENST00000304494 RNF225M0QZC1 329 aaPredicted RBP27.75■■■□□ 2.03
CDKN2A-201ENST00000304494 APODP05090 189 aa27.75■■■□□ 2.03
CDKN2A-201ENST00000304494 SLC6A11P48066 632 aa27.75■■■□□ 2.03
CDKN2A-201ENST00000304494 COG7P83436 770 aa27.75■■■□□ 2.03
CDKN2A-201ENST00000304494 PKDCCQ504Y2 493 aa27.75■■■□□ 2.03
CDKN2A-201ENST00000304494 ENOSF1Q7L5Y1 443 aa27.75■■■□□ 2.03
CDKN2A-201ENST00000304494 FAM114A1Q8IWE2 563 aa27.75■■■□□ 2.03
CDKN2A-201ENST00000304494 SIX6OS1Q8N1H7 587 aa27.75■■■□□ 2.03
CDKN2A-201ENST00000304494 TFAP2BQ92481 460 aa27.75■■■□□ 2.03
CDKN2A-201ENST00000304494 THAP9Q9H5L6 903 aa27.75■■■□□ 2.03
CDKN2A-201ENST00000304494 NCDNQ9UBB6 729 aa27.75■■■□□ 2.03
CDKN2A-201ENST00000304494 RASAL2Q9UJF2 1139 aa27.75■■■□□ 2.03
CDKN2A-201ENST00000304494 STRIP2Q9ULQ0 834 aa27.75■■■□□ 2.03
CDKN2A-201ENST00000304494 CFAP54Q96N23 3096 aa27.75■■■□□ 2.03
CDKN2A-201ENST00000304494 KAT7O95251 611 aa27.74■■■□□ 2.03
CDKN2A-201ENST00000304494 ERCC5P28715 1186 aaPredicted RBP27.74■■■□□ 2.03
CDKN2A-201ENST00000304494 MTIF2P46199 727 aaKnown RBP27.74■■■□□ 2.03
CDKN2A-201ENST00000304494 ZNF132P52740 706 aa27.74■■■□□ 2.03
CDKN2A-201ENST00000304494 ADIGQ0VDE8 80 aa27.74■■■□□ 2.03
CDKN2A-201ENST00000304494 ANO4Q32M45 955 aa27.74■■■□□ 2.03
CDKN2A-201ENST00000304494 DPCR1Q3MIW9 517 aa27.74■■■□□ 2.03
CDKN2A-201ENST00000304494 C12orf40Q86WS4 652 aa27.74■■■□□ 2.03
CDKN2A-201ENST00000304494 TMEM25Q86YD3 366 aa27.74■■■□□ 2.03
CDKN2A-201ENST00000304494 KREMEN1Q96MU8 473 aa27.74■■■□□ 2.03
CDKN2A-201ENST00000304494 UBE2TQ9NPD8 197 aaPredicted RBP27.74■■■□□ 2.03
CDKN2A-201ENST00000304494 ARHGEF4Q9NR80 690 aa27.74■■■□□ 2.03
CDKN2A-201ENST00000304494 CNTN6Q9UQ52 1028 aa27.74■■■□□ 2.03
CDKN2A-201ENST00000304494 ZNF510Q9Y2H8 683 aa27.74■■■□□ 2.03
CDKN2A-201ENST00000304494 M0QYV0 167 aa27.73■■■□□ 2.03
CDKN2A-201ENST00000304494 STC2O76061 302 aa27.73■■■□□ 2.03
CDKN2A-201ENST00000304494 BRD2P25440 801 aaKnown RBP27.73■■■□□ 2.03
CDKN2A-201ENST00000304494 GRIA2P42262 883 aa27.73■■■□□ 2.03
CDKN2A-201ENST00000304494 MFAP3P55082 362 aa27.73■■■□□ 2.03
CDKN2A-201ENST00000304494 SEC13P55735 322 aa27.73■■■□□ 2.03
CDKN2A-201ENST00000304494 EFEMP1Q12805 493 aa27.73■■■□□ 2.03
CDKN2A-201ENST00000304494 GBP6Q6ZN66 633 aa27.73■■■□□ 2.03
CDKN2A-201ENST00000304494 IRF2BP1Q8IU81 584 aa27.73■■■□□ 2.03
CDKN2A-201ENST00000304494 SCML4Q8N228 414 aa27.73■■■□□ 2.03
CDKN2A-201ENST00000304494 USP33Q8TEY7 942 aa27.73■■■□□ 2.03
CDKN2A-201ENST00000304494 CNGB3Q9NQW8 809 aa27.73■■■□□ 2.03
CDKN2A-201ENST00000304494 OLA1Q9NTK5 396 aaKnown RBP27.73■■■□□ 2.03
CDKN2A-201ENST00000304494 FRYLO94915 3013 aa27.72■■■□□ 2.03
CDKN2A-201ENST00000304494 A0A0A0MRY4 1105 aa27.72■■■□□ 2.03
CDKN2A-201ENST00000304494 GTPBP10A4D1E9 387 aaKnown RBP27.72■■■□□ 2.03
CDKN2A-201ENST00000304494 KRT5P13647 590 aa27.72■■■□□ 2.03
CDKN2A-201ENST00000304494 MRPS21P82921 87 aaKnown RBP27.72■■■□□ 2.03
CDKN2A-201ENST00000304494 SIM2Q14190 667 aaPredicted RBP27.72■■■□□ 2.03
CDKN2A-201ENST00000304494 DMC1Q14565 340 aa27.72■■■□□ 2.03
CDKN2A-201ENST00000304494 TRIM65Q6PJ69 517 aa27.72■■■□□ 2.03
CDKN2A-201ENST00000304494 NUDT18Q6ZVK8 323 aa27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms