RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 ADAM12O43184 909 aa13.55□□□□□ -0.24
CCDC7-202ENST00000302316 URODP06132 367 aa13.55□□□□□ -0.24
CCDC7-202ENST00000302316 FYNP06241 537 aa13.55□□□□□ -0.24
CCDC7-202ENST00000302316 KDELR1P24390 212 aa13.55□□□□□ -0.24
CCDC7-202ENST00000302316 PTPN7P35236 360 aa13.55□□□□□ -0.24
CCDC7-202ENST00000302316 RDXP35241 583 aaKnown RBP13.55□□□□□ -0.24
CCDC7-202ENST00000302316 PITX1P78337 314 aaPredicted RBP13.55□□□□□ -0.24
CCDC7-202ENST00000302316 DSG1Q02413 1049 aa13.55□□□□□ -0.24
CCDC7-202ENST00000302316 KLF1Q13351 362 aaPredicted RBP13.55□□□□□ -0.24
CCDC7-202ENST00000302316 BOLA3Q53S33 107 aa13.55□□□□□ -0.24
CCDC7-202ENST00000302316 OTUD1Q5VV17 481 aaPredicted RBP13.55□□□□□ -0.24
CCDC7-202ENST00000302316 FBXO38Q6PIJ6 1188 aa13.55□□□□□ -0.24
CCDC7-202ENST00000302316 NUP93Q8N1F7 819 aa13.55□□□□□ -0.24
CCDC7-202ENST00000302316 CMASQ8NFW8 434 aaPredicted RBP13.55□□□□□ -0.24
CCDC7-202ENST00000302316 CCDC26Q8TAB7 109 aa13.55□□□□□ -0.24
CCDC7-202ENST00000302316 TEKT4Q8WW24 435 aa13.55□□□□□ -0.24
CCDC7-202ENST00000302316 EDEM1Q92611 657 aa13.55□□□□□ -0.24
CCDC7-202ENST00000302316 NT5C3BQ969T7 300 aa13.55□□□□□ -0.24
CCDC7-202ENST00000302316 MAGOHBQ96A72 148 aaKnown RBP13.55□□□□□ -0.24
CCDC7-202ENST00000302316 NPY6RQ99463 290 aa13.55□□□□□ -0.24
CCDC7-202ENST00000302316 SNRNP25Q9BV90 132 aaKnown RBP13.55□□□□□ -0.24
CCDC7-202ENST00000302316 CALN1Q9BXU9 219 aa13.55□□□□□ -0.24
CCDC7-202ENST00000302316 CRISPLD1Q9H336 500 aa13.55□□□□□ -0.24
CCDC7-202ENST00000302316 ARGLU1Q9NWB6 273 aaPredicted RBP13.55□□□□□ -0.24
CCDC7-202ENST00000302316 COX16Q9P0S2 106 aa13.55□□□□□ -0.24
CCDC7-202ENST00000302316 STIM2Q9P246 746 aa13.55□□□□□ -0.24
CCDC7-202ENST00000302316 DMGDHQ9UI17 866 aaKnown RBP13.55□□□□□ -0.24
CCDC7-202ENST00000302316 SLC27A5Q9Y2P5 690 aa13.55□□□□□ -0.24
CCDC7-202ENST00000302316 INSL6Q9Y581 213 aa13.55□□□□□ -0.24
CCDC7-202ENST00000302316 SLC4A7Q9Y6M7 1214 aa13.55□□□□□ -0.24
CCDC7-202ENST00000302316 C3orf70A6NLC5 250 aaPredicted RBP13.55□□□□□ -0.24
CCDC7-202ENST00000302316 ZMYND10O75800 440 aa13.55□□□□□ -0.24
CCDC7-202ENST00000302316 SOAT2O75908 522 aa13.55□□□□□ -0.24
CCDC7-202ENST00000302316 HEXIM1O94992 359 aaKnown RBP13.55□□□□□ -0.24
CCDC7-202ENST00000302316 TJP3O95049 919 aa13.55□□□□□ -0.24
CCDC7-202ENST00000302316 VNN2O95498 520 aa13.55□□□□□ -0.24
CCDC7-202ENST00000302316 TUBBP07437 444 aa13.55□□□□□ -0.24
CCDC7-202ENST00000302316 CD48P09326 243 aa13.55□□□□□ -0.24
CCDC7-202ENST00000302316 CHRNA3P32297 505 aa13.55□□□□□ -0.24
CCDC7-202ENST00000302316 OR1D2P34982 312 aa13.55□□□□□ -0.24
CCDC7-202ENST00000302316 CDH6P55285 790 aa13.55□□□□□ -0.24
CCDC7-202ENST00000302316 VSNL1P62760 191 aa13.55□□□□□ -0.24
CCDC7-202ENST00000302316 KRT81Q14533 505 aa13.55□□□□□ -0.24
CCDC7-202ENST00000302316 BSPRYQ5W0U4 402 aa13.55□□□□□ -0.24
CCDC7-202ENST00000302316 MAATS1Q7Z4T9 603 aa13.55□□□□□ -0.24
CCDC7-202ENST00000302316 DDX53Q86TM3 631 aaKnown RBP13.55□□□□□ -0.24
CCDC7-202ENST00000302316 FAM131BQ86XD5 332 aa13.55□□□□□ -0.24
CCDC7-202ENST00000302316 SLC7A14Q8TBB6 771 aa13.55□□□□□ -0.24
CCDC7-202ENST00000302316 C1orf54Q8WWF1 131 aa13.55□□□□□ -0.24
CCDC7-202ENST00000302316 HERVK_113Q902F9 699 aa13.55□□□□□ -0.24
CCDC7-202ENST00000302316 SLC9A7Q96T83 725 aa13.55□□□□□ -0.24
CCDC7-202ENST00000302316 HINFPQ9BQA5 517 aa13.55□□□□□ -0.24
CCDC7-202ENST00000302316 TRIM62Q9BVG3 475 aa13.55□□□□□ -0.24
CCDC7-202ENST00000302316 GPATCH2LQ9NWQ4 482 aa13.55□□□□□ -0.24
CCDC7-202ENST00000302316 CALCOCO1Q9P1Z2 691 aa13.55□□□□□ -0.24
CCDC7-202ENST00000302316 RAB21Q9UL25 225 aa13.55□□□□□ -0.24
CCDC7-202ENST00000302316 MDM4O15151 490 aa13.54□□□□□ -0.24
CCDC7-202ENST00000302316 HAPLN1P10915 354 aaPredicted RBP13.54□□□□□ -0.24
CCDC7-202ENST00000302316 H2AFXP16104 143 aaPredicted RBP13.54□□□□□ -0.24
CCDC7-202ENST00000302316 MCM3P25205 808 aa13.54□□□□□ -0.24
CCDC7-202ENST00000302316 YWHAGP61981 247 aaKnown RBP eCLIP13.54□□□□□ -0.24
CCDC7-202ENST00000302316 DEUP1Q05D60 604 aa13.54□□□□□ -0.24
CCDC7-202ENST00000302316 DUSP4Q13115 394 aa13.54□□□□□ -0.24
CCDC7-202ENST00000302316 NME3Q13232 169 aa13.54□□□□□ -0.24
CCDC7-202ENST00000302316 CYP1B1Q16678 543 aa13.54□□□□□ -0.24
CCDC7-202ENST00000302316 ZC3H12AQ5D1E8 599 aaKnown RBP13.54□□□□□ -0.24
CCDC7-202ENST00000302316 WDR93Q6P2C0 686 aa13.54□□□□□ -0.24
CCDC7-202ENST00000302316 HERC6Q8IVU3 1022 aa13.54□□□□□ -0.24
CCDC7-202ENST00000302316 VPS52Q8N1B4 723 aa13.54□□□□□ -0.24
CCDC7-202ENST00000302316 C12orf50Q8NA57 414 aaPredicted RBP13.54□□□□□ -0.24
CCDC7-202ENST00000302316 ADAM32Q8TC27 787 aa13.54□□□□□ -0.24
CCDC7-202ENST00000302316 LBHD1Q9BQE6 289 aaPredicted RBP13.54□□□□□ -0.24
CCDC7-202ENST00000302316 FAM204AQ9H8W3 233 aa13.54□□□□□ -0.24
CCDC7-202ENST00000302316 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.54□□□□□ -0.24
CCDC7-202ENST00000302316 RRN3Q9NYV6 651 aa13.54□□□□□ -0.24
CCDC7-202ENST00000302316 MYO16Q9Y6X6 1858 aa13.54□□□□□ -0.24
CCDC7-202ENST00000302316 TTI1O43156 1089 aa13.54□□□□□ -0.24
CCDC7-202ENST00000302316 ENDOD1O94919 500 aa13.54□□□□□ -0.24
CCDC7-202ENST00000302316 DNAJB2P25686 324 aa13.54□□□□□ -0.24
CCDC7-202ENST00000302316 DR1Q01658 176 aa13.54□□□□□ -0.24
CCDC7-202ENST00000302316 ADCY2Q08462 1091 aa13.54□□□□□ -0.24
CCDC7-202ENST00000302316 ERMARDQ5T6L9 678 aa13.54□□□□□ -0.24
CCDC7-202ENST00000302316 CCDC137Q6PK04 289 aaKnown RBP13.54□□□□□ -0.24
CCDC7-202ENST00000302316 DENND5BQ6ZUT9 1274 aa13.54□□□□□ -0.24
CCDC7-202ENST00000302316 BNIPLQ7Z465 357 aa13.54□□□□□ -0.24
CCDC7-202ENST00000302316 CCDC185Q8N715 623 aa13.54□□□□□ -0.24
CCDC7-202ENST00000302316 GPR152Q8TDT2 470 aa13.54□□□□□ -0.24
CCDC7-202ENST00000302316 ATG4AQ8WYN0 398 aa13.54□□□□□ -0.24
CCDC7-202ENST00000302316 RUBCNQ92622 972 aa13.54□□□□□ -0.24
CCDC7-202ENST00000302316 CLSTN3Q9BQT9 956 aa13.54□□□□□ -0.24
CCDC7-202ENST00000302316 MTIF3Q9H2K0 278 aaKnown RBP13.54□□□□□ -0.24
CCDC7-202ENST00000302316 FBXO44Q9H4M3 255 aa13.54□□□□□ -0.24
CCDC7-202ENST00000302316 DDIT4Q9NX09 232 aa13.54□□□□□ -0.24
CCDC7-202ENST00000302316 AP4E1Q9UPM8 1137 aa13.54□□□□□ -0.24
CCDC7-202ENST00000302316 R3HDM2Q9Y2K5 976 aaKnown RBP13.54□□□□□ -0.24
CCDC7-202ENST00000302316 TLL1O43897 1013 aa13.53□□□□□ -0.24
CCDC7-202ENST00000302316 FGF18O76093 207 aa13.53□□□□□ -0.24
CCDC7-202ENST00000302316 ATP2A2P16615 1042 aaKnown RBP13.53□□□□□ -0.24
CCDC7-202ENST00000302316 COILP38432 576 aaPredicted RBP13.53□□□□□ -0.24
CCDC7-202ENST00000302316 FNTAP49354 379 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms