RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 LTFP02788 710 aa9.94□□□□□ -0.82
RFX3-201ENST00000302303 GLI1P08151 1106 aa9.94□□□□□ -0.82
RFX3-201ENST00000302303 MYBL1P10243 752 aa9.94□□□□□ -0.82
RFX3-201ENST00000302303 KRT3P12035 628 aa9.94□□□□□ -0.82
RFX3-201ENST00000302303 HOXB8P17481 243 aaPredicted RBP9.94□□□□□ -0.82
RFX3-201ENST00000302303 HADHBP55084 474 aaKnown RBP9.94□□□□□ -0.82
RFX3-201ENST00000302303 YWHAGP61981 247 aaKnown RBP eCLIP9.94□□□□□ -0.82
RFX3-201ENST00000302303 YWHAZP63104 245 aaKnown RBP9.94□□□□□ -0.82
RFX3-201ENST00000302303 KRT83P78385 493 aa9.94□□□□□ -0.82
RFX3-201ENST00000302303 VEPH1Q14D04 833 aa9.94□□□□□ -0.82
RFX3-201ENST00000302303 SPA17Q15506 151 aa9.94□□□□□ -0.82
RFX3-201ENST00000302303 CCDC85BQ15834 202 aaPredicted RBP9.94□□□□□ -0.82
RFX3-201ENST00000302303 CCDC14Q49A88 953 aa9.94□□□□□ -0.82
RFX3-201ENST00000302303 HS1BP3Q53T59 392 aa9.94□□□□□ -0.82
RFX3-201ENST00000302303 EFHC1Q5JVL4 640 aa9.94□□□□□ -0.82
RFX3-201ENST00000302303 RARS2Q5T160 578 aaKnown RBP9.94□□□□□ -0.82
RFX3-201ENST00000302303 STXBP5Q5T5C0 1151 aa9.94□□□□□ -0.82
RFX3-201ENST00000302303 FAM102AQ5T9C2 384 aaPredicted RBP9.94□□□□□ -0.82
RFX3-201ENST00000302303 SH3PXD2AQ5TCZ1 1133 aa9.94□□□□□ -0.82
RFX3-201ENST00000302303 PPP1R2P3Q6NXS1 205 aa9.94□□□□□ -0.82
RFX3-201ENST00000302303 ITIH5Q86UX2 942 aa9.94□□□□□ -0.82
RFX3-201ENST00000302303 DEFB106AQ8N104 65 aa9.94□□□□□ -0.82
RFX3-201ENST00000302303 SIX6OS1Q8N1H7 587 aa9.94□□□□□ -0.82
RFX3-201ENST00000302303 SMRP1Q8NCR6 262 aa9.94□□□□□ -0.82
RFX3-201ENST00000302303 ITFG1Q8TB96 612 aa9.94□□□□□ -0.82
RFX3-201ENST00000302303 SHKBP1Q8TBC3 707 aa9.94□□□□□ -0.82
RFX3-201ENST00000302303 IPO4Q8TEX9 1081 aaKnown RBP9.94□□□□□ -0.82
RFX3-201ENST00000302303 OVCA2Q8WZ82 227 aa9.94□□□□□ -0.82
RFX3-201ENST00000302303 SMG7Q92540 1137 aaKnown RBP9.94□□□□□ -0.82
RFX3-201ENST00000302303 EDEM1Q92611 657 aa9.94□□□□□ -0.82
RFX3-201ENST00000302303 BTBD6Q96KE9 485 aa9.94□□□□□ -0.82
RFX3-201ENST00000302303 NPY6RQ99463 290 aa9.94□□□□□ -0.82
RFX3-201ENST00000302303 DDX23Q9BUQ8 820 aaKnown RBP9.94□□□□□ -0.82
RFX3-201ENST00000302303 ADAM7Q9H2U9 754 aa9.94□□□□□ -0.82
RFX3-201ENST00000302303 CCSER2Q9H7U1 834 aa9.94□□□□□ -0.82
RFX3-201ENST00000302303 PARVAQ9NVD7 372 aa9.94□□□□□ -0.82
RFX3-201ENST00000302303 CLDND1Q9NY35 253 aa9.94□□□□□ -0.82
RFX3-201ENST00000302303 CLIC5Q9NZA1 410 aa9.94□□□□□ -0.82
RFX3-201ENST00000302303 DPP7Q9UHL4 492 aa9.94□□□□□ -0.82
RFX3-201ENST00000302303 NUDT5Q9UKK9 219 aa9.94□□□□□ -0.82
RFX3-201ENST00000302303 STRIP2Q9ULQ0 834 aa9.94□□□□□ -0.82
RFX3-201ENST00000302303 ANAPC1Q9H1A4 1944 aa9.94□□□□□ -0.82
RFX3-201ENST00000302303 OBSL1O75147 1896 aa9.94□□□□□ -0.82
RFX3-201ENST00000302303 A0A0A6YYK5 440 aaPredicted RBP9.93□□□□□ -0.82
RFX3-201ENST00000302303 A0A1W2PRU2 124 aa9.93□□□□□ -0.82
RFX3-201ENST00000302303 NCK2O43639 380 aa9.93□□□□□ -0.82
RFX3-201ENST00000302303 ENDOD1O94919 500 aa9.93□□□□□ -0.82
RFX3-201ENST00000302303 OAS1P00973 400 aaKnown RBP9.93□□□□□ -0.82
RFX3-201ENST00000302303 GABRR2P28476 465 aa9.93□□□□□ -0.82
RFX3-201ENST00000302303 DEKP35659 375 aaKnown RBP9.93□□□□□ -0.82
RFX3-201ENST00000302303 RNASE9P60153 205 aaKnown RBP9.93□□□□□ -0.82
RFX3-201ENST00000302303 CYP4F8P98187 520 aa9.93□□□□□ -0.82
RFX3-201ENST00000302303 ARTNQ5T4W7 220 aa9.93□□□□□ -0.82
RFX3-201ENST00000302303 MSANTD2Q6P1R3 559 aa9.93□□□□□ -0.82
RFX3-201ENST00000302303 MICALL1Q8N3F8 863 aa9.93□□□□□ -0.82
RFX3-201ENST00000302303 C17orf53Q8N3J3 647 aaPredicted RBP9.93□□□□□ -0.82
RFX3-201ENST00000302303 RXFP2Q8WXD0 754 aa9.93□□□□□ -0.82
RFX3-201ENST00000302303 CTNNBL1Q8WYA6 563 aaPredicted RBP9.93□□□□□ -0.82
RFX3-201ENST00000302303 RFFLQ8WZ73 363 aa9.93□□□□□ -0.82
RFX3-201ENST00000302303 SUSD6Q92537 303 aa9.93□□□□□ -0.82
RFX3-201ENST00000302303 CENPIQ92674 756 aaPredicted RBP9.93□□□□□ -0.82
RFX3-201ENST00000302303 TRIM11Q96F44 468 aa9.93□□□□□ -0.82
RFX3-201ENST00000302303 ZFRQ96KR1 1074 aaKnown RBP9.93□□□□□ -0.82
RFX3-201ENST00000302303 ZSWIM3Q96MP5 696 aa9.93□□□□□ -0.82
RFX3-201ENST00000302303 MCEEQ96PE7 176 aa9.93□□□□□ -0.82
RFX3-201ENST00000302303 NUP85Q9BW27 656 aa9.93□□□□□ -0.82
RFX3-201ENST00000302303 SLC46A2Q9BY10 475 aa9.93□□□□□ -0.82
RFX3-201ENST00000302303 IRX2Q9BZI1 471 aaPredicted RBP9.93□□□□□ -0.82
RFX3-201ENST00000302303 SYNCQ9H7C4 482 aa9.93□□□□□ -0.82
RFX3-201ENST00000302303 POPDC2Q9HBU9 364 aa9.93□□□□□ -0.82
RFX3-201ENST00000302303 DENND4CQ5VZ89 1909 aa9.93□□□□□ -0.82
RFX3-201ENST00000302303 GRXCR2A6NFK2 248 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 I6L893 689 aaPredicted RBP9.92□□□□□ -0.82
RFX3-201ENST00000302303 DPYSL4O14531 572 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 MDM4O15151 490 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 COCHO43405 550 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 HSF2BPO75031 334 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 XYLBO75191 536 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 DAB1O75553 588 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 CCDC175P0C221 793 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 MYL4P12829 197 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 RARGP13631 454 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 FOSL2P15408 326 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 NOS2P35228 1153 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 MATKP42679 507 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 ATXN1P54253 815 aaKnown RBP9.92□□□□□ -0.82
RFX3-201ENST00000302303 SNX16P57768 344 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 PABPC1LQ4VXU2 614 aaKnown RBP9.92□□□□□ -0.82
RFX3-201ENST00000302303 TXNDC8Q6A555 127 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 DNAJC24Q6P3W2 148 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 CYP4V2Q6ZWL3 525 aaPredicted RBP9.92□□□□□ -0.82
RFX3-201ENST00000302303 CCAR2Q8N163 923 aaKnown RBP9.92□□□□□ -0.82
RFX3-201ENST00000302303 MSANTD4Q8NCY6 345 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 RIN3Q8TB24 985 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 ADAMTS19Q8TE59 1207 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 FNIP1Q8TF40 1166 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 WBP2Q969T9 261 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 CFAP57Q96MR6 1250 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 SLITRK1Q96PX8 696 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 CYP2S1Q96SQ9 504 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms