RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 VSTM1Q6UX27 236 aa15.18■□□□□ 0.02
SMG8-201ENST00000300917 C3orf62Q6ZUJ4 267 aa15.18■□□□□ 0.02
SMG8-201ENST00000300917 UNC93AQ86WB7 457 aa15.18■□□□□ 0.02
SMG8-201ENST00000300917 TTC39CQ8N584 583 aa15.18■□□□□ 0.02
SMG8-201ENST00000300917 GSTCDQ8NEC7 633 aa15.18■□□□□ 0.02
SMG8-201ENST00000300917 ATXN2LQ8WWM7 1075 aaKnown RBP15.18■□□□□ 0.02
SMG8-201ENST00000300917 SERPINB12Q96P63 405 aa15.18■□□□□ 0.02
SMG8-201ENST00000300917 FAM129AQ9BZQ8 928 aa15.18■□□□□ 0.02
SMG8-201ENST00000300917 CNOT10Q9H9A5 744 aaKnown RBP15.18■□□□□ 0.02
SMG8-201ENST00000300917 SPC25Q9HBM1 224 aa15.18■□□□□ 0.02
SMG8-201ENST00000300917 AP4E1Q9UPM8 1137 aa15.18■□□□□ 0.02
SMG8-201ENST00000300917 AOC2O75106 756 aa15.17■□□□□ 0.02
SMG8-201ENST00000300917 APRTP07741 180 aa15.17■□□□□ 0.02
SMG8-201ENST00000300917 BRCC3P46736 316 aa15.17■□□□□ 0.02
SMG8-201ENST00000300917 CACNB2Q08289 660 aaPredicted RBP15.17■□□□□ 0.02
SMG8-201ENST00000300917 KCNA10Q16322 511 aa15.17■□□□□ 0.02
SMG8-201ENST00000300917 MFSD14CQ5VZR4 134 aa15.17■□□□□ 0.02
SMG8-201ENST00000300917 IGDCC3Q8IVU1 814 aa15.17■□□□□ 0.02
SMG8-201ENST00000300917 PALM2Q8IXS6 379 aa15.17■□□□□ 0.02
SMG8-201ENST00000300917 PPIL6Q8IXY8 311 aa15.17■□□□□ 0.02
SMG8-201ENST00000300917 CCHCR1Q8TD31 782 aa15.17■□□□□ 0.02
SMG8-201ENST00000300917 CHMP6Q96FZ7 201 aa15.17■□□□□ 0.02
SMG8-201ENST00000300917 KCNE1P15382 129 aa15.17■□□□□ 0.02
SMG8-201ENST00000300917 PTPN7P35236 360 aa15.17■□□□□ 0.02
SMG8-201ENST00000300917 BSPRYQ5W0U4 402 aa15.17■□□□□ 0.02
SMG8-201ENST00000300917 EDEM1Q92611 657 aa15.17■□□□□ 0.02
SMG8-201ENST00000300917 CFAP36Q96G28 342 aa15.17■□□□□ 0.02
SMG8-201ENST00000300917 FAXDC2Q96IV6 333 aa15.17■□□□□ 0.02
SMG8-201ENST00000300917 CABS1Q96KC9 395 aa15.17■□□□□ 0.02
SMG8-201ENST00000300917 TNIP3Q96KP6 325 aa15.17■□□□□ 0.02
SMG8-201ENST00000300917 ROPN1BQ9BZX4 212 aaPredicted RBP15.17■□□□□ 0.02
SMG8-201ENST00000300917 STMN4Q9H169 189 aaPredicted RBP15.17■□□□□ 0.02
SMG8-201ENST00000300917 ROPN1Q9HAT0 212 aaPredicted RBP15.17■□□□□ 0.02
SMG8-201ENST00000300917 TMEM30AQ9NV96 361 aa15.17■□□□□ 0.02
SMG8-201ENST00000300917 TRPV2Q9Y5S1 764 aa15.17■□□□□ 0.02
SMG8-201ENST00000300917 A0A087WUV0 522 aaPredicted RBP15.16■□□□□ 0.02
SMG8-201ENST00000300917 A0A1W2PPM1 405 aa15.16■□□□□ 0.02
SMG8-201ENST00000300917 ARL5CA6NH57 179 aa15.16■□□□□ 0.02
SMG8-201ENST00000300917 A6NNZ2 444 aa15.16■□□□□ 0.02
SMG8-201ENST00000300917 MGEA5O60502 916 aa15.16■□□□□ 0.02
SMG8-201ENST00000300917 B3GAT3O94766 335 aa15.16■□□□□ 0.02
SMG8-201ENST00000300917 KIAA0754O94854 1291 aa15.16■□□□□ 0.02
SMG8-201ENST00000300917 THP07101 528 aa15.16■□□□□ 0.02
SMG8-201ENST00000300917 GPX6P59796 221 aa15.16■□□□□ 0.02
SMG8-201ENST00000300917 TFDP2Q14188 446 aa15.16■□□□□ 0.02
SMG8-201ENST00000300917 NOMO1Q15155 1222 aa15.16■□□□□ 0.02
SMG8-201ENST00000300917 TUBB8Q3ZCM7 444 aa15.16■□□□□ 0.02
SMG8-201ENST00000300917 BOLA3Q53S33 107 aa15.16■□□□□ 0.02
SMG8-201ENST00000300917 TAF2Q6P1X5 1199 aa15.16■□□□□ 0.02
SMG8-201ENST00000300917 SIX6OS1Q8N1H7 587 aa15.16■□□□□ 0.02
SMG8-201ENST00000300917 STKLD1Q8NE28 680 aa15.16■□□□□ 0.02
SMG8-201ENST00000300917 SEC16BQ96JE7 1060 aa15.16■□□□□ 0.02
SMG8-201ENST00000300917 WDR83Q9BRX9 315 aaKnown RBP15.16■□□□□ 0.02
SMG8-201ENST00000300917 SEPT10Q9P0V9 454 aa15.16■□□□□ 0.02
SMG8-201ENST00000300917 TCP11X1B4DZS4 312 aa15.16■□□□□ 0.02
SMG8-201ENST00000300917 CDH16O75309 829 aa15.16■□□□□ 0.02
SMG8-201ENST00000300917 PRKAR2AP13861 404 aaKnown RBP15.16■□□□□ 0.02
SMG8-201ENST00000300917 TKTL1P51854 596 aa15.16■□□□□ 0.02
SMG8-201ENST00000300917 ARL4CP56559 192 aa15.16■□□□□ 0.02
SMG8-201ENST00000300917 YWHAGP61981 247 aaKnown RBP eCLIP15.16■□□□□ 0.02
SMG8-201ENST00000300917 SLC10A2Q12908 348 aaPredicted RBP15.16■□□□□ 0.02
SMG8-201ENST00000300917 GPRIN1Q7Z2K8 1008 aa15.16■□□□□ 0.02
SMG8-201ENST00000300917 TP53INP2Q8IXH6 220 aa15.16■□□□□ 0.02
SMG8-201ENST00000300917 CRYBG2Q8N1P7 616 aa15.16■□□□□ 0.02
SMG8-201ENST00000300917 MICALL1Q8N3F8 863 aa15.16■□□□□ 0.02
SMG8-201ENST00000300917 CRTAC1Q9NQ79 661 aa15.16■□□□□ 0.02
SMG8-201ENST00000300917 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.16■□□□□ 0.02
SMG8-201ENST00000300917 PADI3Q9ULW8 664 aa15.16■□□□□ 0.02
SMG8-201ENST00000300917 CLUHO75153 1309 aa15.16■□□□□ 0.02
SMG8-201ENST00000300917 FAM155AB1AL88 458 aaPredicted RBP15.16■□□□□ 0.02
SMG8-201ENST00000300917 M0QYT0 321 aa15.16■□□□□ 0.02
SMG8-201ENST00000300917 NRP1O14786 923 aa15.16■□□□□ 0.02
SMG8-201ENST00000300917 CAPN9O14815 690 aa15.16■□□□□ 0.02
SMG8-201ENST00000300917 CYBAP13498 195 aa15.16■□□□□ 0.02
SMG8-201ENST00000300917 DESP17661 470 aa15.16■□□□□ 0.02
SMG8-201ENST00000300917 GSCP56915 257 aaPredicted RBP15.16■□□□□ 0.02
SMG8-201ENST00000300917 ARHGAP17Q68EM7 881 aa15.16■□□□□ 0.02
SMG8-201ENST00000300917 AGMOQ6ZNB7 445 aa15.16■□□□□ 0.02
SMG8-201ENST00000300917 FAM47EQ6ZV65 393 aa15.16■□□□□ 0.02
SMG8-201ENST00000300917 PAQR9Q6ZVX9 377 aa15.16■□□□□ 0.02
SMG8-201ENST00000300917 OTUD6BQ8N6M0 293 aa15.16■□□□□ 0.02
SMG8-201ENST00000300917 FBF1Q8TES7 1133 aa15.16■□□□□ 0.02
SMG8-201ENST00000300917 KCTD15Q96SI1 283 aaPredicted RBP15.16■□□□□ 0.02
SMG8-201ENST00000300917 TMEM109Q9BVC6 243 aa15.16■□□□□ 0.02
SMG8-201ENST00000300917 FGFR1OP2Q9NVK5 253 aa15.16■□□□□ 0.02
SMG8-201ENST00000300917 LAMA3Q16787 3333 aa15.16■□□□□ 0.02
SMG8-201ENST00000300917 AP1G2O75843 785 aa15.15■□□□□ 0.02
SMG8-201ENST00000300917 USP17L7P0C7H9 530 aa15.15■□□□□ 0.02
SMG8-201ENST00000300917 DRD4P21917 467 aa15.15■□□□□ 0.02
SMG8-201ENST00000300917 GCAP28676 217 aa15.15■□□□□ 0.02
SMG8-201ENST00000300917 PNPLA4P41247 253 aa15.15■□□□□ 0.02
SMG8-201ENST00000300917 ELK3P41970 407 aa15.15■□□□□ 0.02
SMG8-201ENST00000300917 FCGRTP55899 365 aa15.15■□□□□ 0.02
SMG8-201ENST00000300917 MFSD5Q6N075 450 aa15.15■□□□□ 0.02
SMG8-201ENST00000300917 RSPH3Q86UC2 560 aa15.15■□□□□ 0.02
SMG8-201ENST00000300917 NAT8LQ8N9F0 302 aa15.15■□□□□ 0.02
SMG8-201ENST00000300917 PPP1R10Q96QC0 940 aaKnown RBP15.15■□□□□ 0.02
SMG8-201ENST00000300917 ULBP1Q9BZM6 244 aa15.15■□□□□ 0.02
SMG8-201ENST00000300917 MAGED2Q9UNF1 606 aaPredicted RBP15.15■□□□□ 0.02
SMG8-201ENST00000300917 SHOC2Q9UQ13 582 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms