RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 GCNAQ96QF7 691 aa13.77□□□□□ -0.21
CASC4-201ENST00000299957 LGMNQ99538 433 aa13.77□□□□□ -0.21
CASC4-201ENST00000299957 SERPINI1Q99574 410 aa13.77□□□□□ -0.21
CASC4-201ENST00000299957 CNPY3Q9BT09 278 aa13.77□□□□□ -0.21
CASC4-201ENST00000299957 PIF1Q9H611 641 aa13.77□□□□□ -0.21
CASC4-201ENST00000299957 ARHGAP26Q9UNA1 814 aa13.77□□□□□ -0.21
CASC4-201ENST00000299957 MYO5AQ9Y4I1 1855 aaKnown RBP13.77□□□□□ -0.21
CASC4-201ENST00000299957 SPTLC1O15269 473 aa13.76□□□□□ -0.21
CASC4-201ENST00000299957 UGT1A9O60656 530 aa13.76□□□□□ -0.21
CASC4-201ENST00000299957 TGM2P21980 687 aa13.76□□□□□ -0.21
CASC4-201ENST00000299957 PMLP29590 882 aa13.76□□□□□ -0.21
CASC4-201ENST00000299957 TSTA3Q13630 321 aaPredicted RBP13.76□□□□□ -0.21
CASC4-201ENST00000299957 VWA5B1Q5TIE3 1220 aa13.76□□□□□ -0.21
CASC4-201ENST00000299957 MOB2Q70IA6 237 aa13.76□□□□□ -0.21
CASC4-201ENST00000299957 CMC1Q7Z7K0 106 aa13.76□□□□□ -0.21
CASC4-201ENST00000299957 DIS3LQ8TF46 1054 aaKnown RBP13.76□□□□□ -0.21
CASC4-201ENST00000299957 UGT1A7Q9HAW7 530 aa13.76□□□□□ -0.21
CASC4-201ENST00000299957 UGT1A10Q9HAW8 530 aa13.76□□□□□ -0.21
CASC4-201ENST00000299957 UGT1A8Q9HAW9 530 aa13.76□□□□□ -0.21
CASC4-201ENST00000299957 AP4E1Q9UPM8 1137 aa13.76□□□□□ -0.21
CASC4-201ENST00000299957 WASF2Q9Y6W5 498 aa13.76□□□□□ -0.21
CASC4-201ENST00000299957 CHD2O14647 1828 aaKnown RBP13.76□□□□□ -0.21
CASC4-201ENST00000299957 UBA6A0AVT1 1052 aaPredicted RBP13.76□□□□□ -0.21
CASC4-201ENST00000299957 PRR5-ARHGAP8B1AHC4 643 aa13.76□□□□□ -0.21
CASC4-201ENST00000299957 C6orf222P0C671 652 aaPredicted RBP13.76□□□□□ -0.21
CASC4-201ENST00000299957 NCAM1P13591 858 aa13.76□□□□□ -0.21
CASC4-201ENST00000299957 INSRRP14616 1297 aa13.76□□□□□ -0.21
CASC4-201ENST00000299957 UBA1P22314 1058 aaKnown RBP13.76□□□□□ -0.21
CASC4-201ENST00000299957 ARHGAP8P85298 464 aa13.76□□□□□ -0.21
CASC4-201ENST00000299957 USP4Q13107 963 aa13.76□□□□□ -0.21
CASC4-201ENST00000299957 SLC15A2Q16348 729 aa13.76□□□□□ -0.21
CASC4-201ENST00000299957 MPZL3Q6UWV2 235 aa13.76□□□□□ -0.21
CASC4-201ENST00000299957 DDIASQ8IXT1 998 aa13.76□□□□□ -0.21
CASC4-201ENST00000299957 GSTCDQ8NEC7 633 aa13.76□□□□□ -0.21
CASC4-201ENST00000299957 CDC26Q8NHZ8 85 aa13.76□□□□□ -0.21
CASC4-201ENST00000299957 PABPC5Q96DU9 382 aaKnown RBP13.76□□□□□ -0.21
CASC4-201ENST00000299957 ZNF711Q9Y462 761 aa13.76□□□□□ -0.21
CASC4-201ENST00000299957 LAMA4Q16363 1823 aa13.76□□□□□ -0.21
CASC4-201ENST00000299957 BCL9LQ86UU0 1499 aa13.76□□□□□ -0.21
CASC4-201ENST00000299957 TMEM191CA6NGB0 347 aa13.76□□□□□ -0.21
CASC4-201ENST00000299957 KPNA7A9QM74 516 aa13.76□□□□□ -0.21
CASC4-201ENST00000299957 MAFGO15525 162 aa13.76□□□□□ -0.21
CASC4-201ENST00000299957 PHGDHO43175 533 aaKnown RBP13.76□□□□□ -0.21
CASC4-201ENST00000299957 JCHAINP01591 159 aa13.76□□□□□ -0.21
CASC4-201ENST00000299957 MYL3P08590 195 aa13.76□□□□□ -0.21
CASC4-201ENST00000299957 TMEM132BQ14DG7 1078 aa13.76□□□□□ -0.21
CASC4-201ENST00000299957 HSDL1Q3SXM5 330 aa13.76□□□□□ -0.21
CASC4-201ENST00000299957 BOLA3Q53S33 107 aa13.76□□□□□ -0.21
CASC4-201ENST00000299957 STRA8Q7Z7C7 330 aa13.76□□□□□ -0.21
CASC4-201ENST00000299957 COLGALT1Q8NBJ5 622 aa13.76□□□□□ -0.21
CASC4-201ENST00000299957 LPIN3Q9BQK8 851 aa13.76□□□□□ -0.21
CASC4-201ENST00000299957 GPR88Q9GZN0 384 aa13.76□□□□□ -0.21
CASC4-201ENST00000299957 GGA2Q9UJY4 613 aa13.76□□□□□ -0.21
CASC4-201ENST00000299957 MMP8P22894 467 aa13.75□□□□□ -0.21
CASC4-201ENST00000299957 RABGGTBP53611 331 aa13.75□□□□□ -0.21
CASC4-201ENST00000299957 SLC34A1Q06495 639 aa13.75□□□□□ -0.21
CASC4-201ENST00000299957 UNC5BQ8IZJ1 945 aa13.75□□□□□ -0.21
CASC4-201ENST00000299957 CPT1BQ92523 772 aa13.75□□□□□ -0.21
CASC4-201ENST00000299957 OSMRQ99650 979 aa13.75□□□□□ -0.21
CASC4-201ENST00000299957 SH3GL3Q99963 347 aa13.75□□□□□ -0.21
CASC4-201ENST00000299957 CAAP1Q9H8G2 361 aa13.75□□□□□ -0.21
CASC4-201ENST00000299957 DDIT4Q9NX09 232 aa13.75□□□□□ -0.21
CASC4-201ENST00000299957 SNTG2Q9NY99 539 aa13.75□□□□□ -0.21
CASC4-201ENST00000299957 BCAP29Q9UHQ4 241 aa13.75□□□□□ -0.21
CASC4-201ENST00000299957 C2CD2Q9Y426 696 aa13.75□□□□□ -0.21
CASC4-201ENST00000299957 PABPN1LA6NDY0 278 aaKnown RBP13.75□□□□□ -0.21
CASC4-201ENST00000299957 LRCH4O75427 683 aa13.75□□□□□ -0.21
CASC4-201ENST00000299957 RALBP11234 206 aa13.75□□□□□ -0.21
CASC4-201ENST00000299957 CCDC130P13994 396 aa13.75□□□□□ -0.21
CASC4-201ENST00000299957 ABCD1P33897 745 aa13.75□□□□□ -0.21
CASC4-201ENST00000299957 PTGER2P43116 358 aa13.75□□□□□ -0.21
CASC4-201ENST00000299957 ATXN1P54253 815 aaKnown RBP13.75□□□□□ -0.21
CASC4-201ENST00000299957 LACTB2Q53H82 288 aaPredicted RBP13.75□□□□□ -0.21
CASC4-201ENST00000299957 BRSK2Q8IWQ3 736 aa13.75□□□□□ -0.21
CASC4-201ENST00000299957 KCTD17Q8N5Z5 321 aa13.75□□□□□ -0.21
CASC4-201ENST00000299957 IARS2Q9NSE4 1012 aaKnown RBP13.75□□□□□ -0.21
CASC4-201ENST00000299957 STAP1Q9ULZ2 295 aa13.75□□□□□ -0.21
CASC4-201ENST00000299957 STARD13Q9Y3M8 1113 aa13.75□□□□□ -0.21
CASC4-201ENST00000299957 DPPA5A6NC42 116 aa13.75□□□□□ -0.21
CASC4-201ENST00000299957 EEF2KO00418 725 aaKnown RBP13.75□□□□□ -0.21
CASC4-201ENST00000299957 MUTP22033 750 aa13.75□□□□□ -0.21
CASC4-201ENST00000299957 SNRPFP62306 86 aaKnown RBP13.75□□□□□ -0.21
CASC4-201ENST00000299957 CDK16Q00536 496 aa13.75□□□□□ -0.21
CASC4-201ENST00000299957 FLOT2Q14254 428 aa13.75□□□□□ -0.21
CASC4-201ENST00000299957 DNAL1Q4LDG9 190 aa13.75□□□□□ -0.21
CASC4-201ENST00000299957 AFG1LQ8WV93 481 aa13.75□□□□□ -0.21
CASC4-201ENST00000299957 UCMAQ8WVF2 138 aa13.75□□□□□ -0.21
CASC4-201ENST00000299957 SLC10A4Q96EP9 437 aa13.75□□□□□ -0.21
CASC4-201ENST00000299957 APOPT1Q96IL0 206 aa13.75□□□□□ -0.21
CASC4-201ENST00000299957 CATSPER2Q96P56 530 aa13.75□□□□□ -0.21
CASC4-201ENST00000299957 NMRK1Q9NWW6 199 aa13.75□□□□□ -0.21
CASC4-201ENST00000299957 FAM8A1Q9UBU6 413 aa13.75□□□□□ -0.21
CASC4-201ENST00000299957 SMNDC1O75940 238 aaKnown RBP eCLIP13.74□□□□□ -0.21
CASC4-201ENST00000299957 POLBP06746 335 aa13.74□□□□□ -0.21
CASC4-201ENST00000299957 NCKAP1LP55160 1127 aa13.74□□□□□ -0.21
CASC4-201ENST00000299957 DSG1Q02413 1049 aa13.74□□□□□ -0.21
CASC4-201ENST00000299957 POU6F1Q14863 301 aa13.74□□□□□ -0.21
CASC4-201ENST00000299957 STYK1Q6J9G0 422 aa13.74□□□□□ -0.21
CASC4-201ENST00000299957 MFSD5Q6N075 450 aa13.74□□□□□ -0.21
CASC4-201ENST00000299957 WDR49Q8IV35 697 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms