RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 PRPF39Q86UA1 669 aaKnown RBP13.98□□□□□ -0.17
CTDP1-202ENST00000299543 KBTBD2Q8IY47 623 aa13.98□□□□□ -0.17
CTDP1-202ENST00000299543 UBR7Q8N806 425 aa13.98□□□□□ -0.17
CTDP1-202ENST00000299543 SLC4A11Q8NBS3 891 aa13.98□□□□□ -0.17
CTDP1-202ENST00000299543 SERAC1Q96JX3 654 aa13.98□□□□□ -0.17
CTDP1-202ENST00000299543 MECRQ9BV79 373 aa13.98□□□□□ -0.17
CTDP1-202ENST00000299543 SPATC1LQ9H0A9 340 aa13.98□□□□□ -0.17
CTDP1-202ENST00000299543 ACSS3Q9H6R3 686 aa13.98□□□□□ -0.17
CTDP1-202ENST00000299543 ASNSD1Q9NWL6 643 aa13.98□□□□□ -0.17
CTDP1-202ENST00000299543 PIH1D1Q9NWS0 290 aaKnown RBP13.98□□□□□ -0.17
CTDP1-202ENST00000299543 ARMCX1Q9P291 453 aa13.98□□□□□ -0.17
CTDP1-202ENST00000299543 SIX4Q9UIU6 781 aa13.98□□□□□ -0.17
CTDP1-202ENST00000299543 A0A087WZ62 844 aa13.97□□□□□ -0.17
CTDP1-202ENST00000299543 TCRBV9S1A1TA0A576 114 aa13.97□□□□□ -0.17
CTDP1-202ENST00000299543 A6NJR5 290 aa13.97□□□□□ -0.17
CTDP1-202ENST00000299543 NVLO15381 856 aaKnown RBP13.97□□□□□ -0.17
CTDP1-202ENST00000299543 FAM189A1O60320 539 aa13.97□□□□□ -0.17
CTDP1-202ENST00000299543 ICAM3P32942 547 aa13.97□□□□□ -0.17
CTDP1-202ENST00000299543 ACVR2BQ13705 512 aa13.97□□□□□ -0.17
CTDP1-202ENST00000299543 LBRQ14739 615 aaKnown RBP13.97□□□□□ -0.17
CTDP1-202ENST00000299543 VPS52Q8N1B4 723 aa13.97□□□□□ -0.17
CTDP1-202ENST00000299543 SCG3Q8WXD2 468 aaKnown RBP13.97□□□□□ -0.17
CTDP1-202ENST00000299543 CCDC97Q96F63 343 aaPredicted RBP13.97□□□□□ -0.17
CTDP1-202ENST00000299543 PRR11Q96HE9 360 aaPredicted RBP13.97□□□□□ -0.17
CTDP1-202ENST00000299543 TMEM176AQ96HP8 235 aa13.97□□□□□ -0.17
CTDP1-202ENST00000299543 PEBP4Q96S96 227 aa13.97□□□□□ -0.17
CTDP1-202ENST00000299543 FDXACB1Q9BRP7 624 aaPredicted RBP13.97□□□□□ -0.17
CTDP1-202ENST00000299543 PDGFCQ9NRA1 345 aa13.97□□□□□ -0.17
CTDP1-202ENST00000299543 PHF24Q9UPV7 400 aa13.97□□□□□ -0.17
CTDP1-202ENST00000299543 TRIM49D1C9J1S8 452 aa13.97□□□□□ -0.17
CTDP1-202ENST00000299543 ACKR2O00590 384 aa13.97□□□□□ -0.17
CTDP1-202ENST00000299543 HNRNPCP07910 306 aaKnown RBP eCLIP13.97□□□□□ -0.17
CTDP1-202ENST00000299543 IQCF3P0C7M6 154 aa13.97□□□□□ -0.17
CTDP1-202ENST00000299543 T-ENOLP0DO92 83 aa13.97□□□□□ -0.17
CTDP1-202ENST00000299543 CCNB1P14635 433 aa13.97□□□□□ -0.17
CTDP1-202ENST00000299543 SERPINB3P29508 390 aa13.97□□□□□ -0.17
CTDP1-202ENST00000299543 RASSF2P50749 326 aa13.97□□□□□ -0.17
CTDP1-202ENST00000299543 MPP3Q13368 585 aa13.97□□□□□ -0.17
CTDP1-202ENST00000299543 VGLL4Q14135 290 aa13.97□□□□□ -0.17
CTDP1-202ENST00000299543 CCDC110Q8TBZ0 833 aa13.97□□□□□ -0.17
CTDP1-202ENST00000299543 HPDLQ96IR7 371 aa13.97□□□□□ -0.17
CTDP1-202ENST00000299543 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.97□□□□□ -0.17
CTDP1-202ENST00000299543 PCDHGC3Q9UN70 934 aa13.97□□□□□ -0.17
CTDP1-202ENST00000299543 IQANK1A0A1B0GTG1 560 aa13.97□□□□□ -0.17
CTDP1-202ENST00000299543 APOC4-APOC2K7ER74 178 aa13.97□□□□□ -0.17
CTDP1-202ENST00000299543 TRUB2O95900 331 aaKnown RBP13.97□□□□□ -0.17
CTDP1-202ENST00000299543 ZBED1O96006 694 aa13.97□□□□□ -0.17
CTDP1-202ENST00000299543 APOC2P02655 101 aa13.97□□□□□ -0.17
CTDP1-202ENST00000299543 TXNP10599 105 aaKnown RBP13.97□□□□□ -0.17
CTDP1-202ENST00000299543 NDST1P52848 882 aa13.97□□□□□ -0.17
CTDP1-202ENST00000299543 BCAR1P56945 870 aa13.97□□□□□ -0.17
CTDP1-202ENST00000299543 AMHR2Q16671 573 aa13.97□□□□□ -0.17
CTDP1-202ENST00000299543 CASC4Q6P4E1 433 aa13.97□□□□□ -0.17
CTDP1-202ENST00000299543 ADGRD1Q6QNK2 874 aa13.97□□□□□ -0.17
CTDP1-202ENST00000299543 DSTYKQ6XUX3 929 aa13.97□□□□□ -0.17
CTDP1-202ENST00000299543 POLNQ7Z5Q5 900 aa13.97□□□□□ -0.17
CTDP1-202ENST00000299543 SCUBE3Q8IX30 993 aa13.97□□□□□ -0.17
CTDP1-202ENST00000299543 MCUR1Q96AQ8 359 aa13.97□□□□□ -0.17
CTDP1-202ENST00000299543 ZNF333Q96JL9 665 aa13.97□□□□□ -0.17
CTDP1-202ENST00000299543 VPS33BQ9H267 617 aa13.97□□□□□ -0.17
CTDP1-202ENST00000299543 ELP3Q9H9T3 547 aa13.97□□□□□ -0.17
CTDP1-202ENST00000299543 COPEO14579 308 aa13.96□□□□□ -0.17
CTDP1-202ENST00000299543 OPHN1O60890 802 aa13.96□□□□□ -0.17
CTDP1-202ENST00000299543 HAUS5O94927 633 aa13.96□□□□□ -0.17
CTDP1-202ENST00000299543 HMGCRP04035 888 aa13.96□□□□□ -0.17
CTDP1-202ENST00000299543 FAM200BP0CF97 657 aa13.96□□□□□ -0.17
CTDP1-202ENST00000299543 RBL1P28749 1068 aa13.96□□□□□ -0.17
CTDP1-202ENST00000299543 LBX2Q6XYB7 198 aa13.96□□□□□ -0.17
CTDP1-202ENST00000299543 AGGF1Q8N302 714 aaeCLIP13.96□□□□□ -0.17
CTDP1-202ENST00000299543 DCAKDQ8WVC6 231 aa13.96□□□□□ -0.17
CTDP1-202ENST00000299543 FAM167AQ96KS9 214 aa13.96□□□□□ -0.17
CTDP1-202ENST00000299543 C12orf42Q96LP6 360 aa13.96□□□□□ -0.17
CTDP1-202ENST00000299543 RNPEPQ9H4A4 650 aa13.96□□□□□ -0.17
CTDP1-202ENST00000299543 ZNF395Q9H8N7 513 aaPredicted RBP13.96□□□□□ -0.17
CTDP1-202ENST00000299543 NUMBLQ9Y6R0 609 aa13.96□□□□□ -0.17
CTDP1-202ENST00000299543 SYNJ2BP-COX16A0A087WUM0 186 aa13.96□□□□□ -0.17
CTDP1-202ENST00000299543 IGKV6D-21A0A0A0MT36 114 aa13.96□□□□□ -0.17
CTDP1-202ENST00000299543 ATP5HO75947 161 aa13.96□□□□□ -0.17
CTDP1-202ENST00000299543 BAG2O95816 211 aa13.96□□□□□ -0.17
CTDP1-202ENST00000299543 RCN1Q15293 331 aa13.96□□□□□ -0.17
CTDP1-202ENST00000299543 LRRC36Q1X8D7 754 aa13.96□□□□□ -0.17
CTDP1-202ENST00000299543 MAP1SQ66K74 1059 aaPredicted RBP13.96□□□□□ -0.17
CTDP1-202ENST00000299543 MOB2Q70IA6 237 aa13.96□□□□□ -0.17
CTDP1-202ENST00000299543 ANKRD23Q86SG2 305 aa13.96□□□□□ -0.17
CTDP1-202ENST00000299543 TTC7BQ86TV6 843 aa13.96□□□□□ -0.17
CTDP1-202ENST00000299543 SLC7A6OSQ96CW6 309 aaPredicted RBP13.96□□□□□ -0.17
CTDP1-202ENST00000299543 GPR20Q99678 358 aa13.96□□□□□ -0.17
CTDP1-202ENST00000299543 MAGEB5Q9BZ81 275 aa13.96□□□□□ -0.17
CTDP1-202ENST00000299543 C2orf40Q9H1Z8 148 aa13.96□□□□□ -0.17
CTDP1-202ENST00000299543 COX16Q9P0S2 106 aa13.96□□□□□ -0.17
CTDP1-202ENST00000299543 ZNF112Q9UJU3 913 aa13.96□□□□□ -0.17
CTDP1-202ENST00000299543 ZNF711Q9Y462 761 aa13.96□□□□□ -0.17
CTDP1-202ENST00000299543 CSADQ9Y600 493 aa13.96□□□□□ -0.17
CTDP1-202ENST00000299543 ZNF646O15015 1829 aaPredicted RBP13.96□□□□□ -0.18
CTDP1-202ENST00000299543 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.96□□□□□ -0.18
CTDP1-202ENST00000299543 MAGEB2O15479 319 aa13.96□□□□□ -0.18
CTDP1-202ENST00000299543 MROH9Q5TGP6 573 aa13.96□□□□□ -0.18
CTDP1-202ENST00000299543 CLNKQ7Z7G1 428 aa13.96□□□□□ -0.18
CTDP1-202ENST00000299543 APOBEC3FQ8IUX4 373 aaKnown RBP13.96□□□□□ -0.18
CTDP1-202ENST00000299543 PPFIBP2Q8ND30 876 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms