RNA–Protein interactions for RNA: ENST00000297350.8

TNFRSF11B-201, Transcript of TNF receptor superfamily member 11b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF11B, Length 2,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-201ENST00000297350 RNPEPQ9H4A4 650 aa10.41□□□□□ -0.74
TNFRSF11B-201ENST00000297350 PCDH18Q9HCL0 1135 aa10.41□□□□□ -0.74
TNFRSF11B-201ENST00000297350 SLC45A1Q9Y2W3 748 aa10.41□□□□□ -0.74
TNFRSF11B-201ENST00000297350 IQCA1LA6NCM1 817 aa10.4□□□□□ -0.74
TNFRSF11B-201ENST00000297350 GLTPD2A6NH11 291 aa10.4□□□□□ -0.74
TNFRSF11B-201ENST00000297350 LUC7L3O95232 432 aaKnown RBP10.4□□□□□ -0.74
TNFRSF11B-201ENST00000297350 MLNP12872 115 aa10.4□□□□□ -0.74
TNFRSF11B-201ENST00000297350 MAGEA3P43357 314 aa10.4□□□□□ -0.74
TNFRSF11B-201ENST00000297350 RPL34P49207 117 aaKnown RBP10.4□□□□□ -0.74
TNFRSF11B-201ENST00000297350 ATG16L1Q676U5 607 aa10.4□□□□□ -0.74
TNFRSF11B-201ENST00000297350 SH2D5Q6ZV89 423 aa10.4□□□□□ -0.74
TNFRSF11B-201ENST00000297350 SLC26A9Q7LBE3 791 aa10.4□□□□□ -0.74
TNFRSF11B-201ENST00000297350 VPS52Q8N1B4 723 aa10.4□□□□□ -0.74
TNFRSF11B-201ENST00000297350 BEST2Q8NFU1 509 aa10.4□□□□□ -0.74
TNFRSF11B-201ENST00000297350 CENPIQ92674 756 aaPredicted RBP10.4□□□□□ -0.74
TNFRSF11B-201ENST00000297350 KIF12Q96FN5 646 aa10.4□□□□□ -0.74
TNFRSF11B-201ENST00000297350 FERMT1Q9BQL6 677 aa10.4□□□□□ -0.74
TNFRSF11B-201ENST00000297350 TXNRD2Q9NNW7 524 aa10.4□□□□□ -0.74
TNFRSF11B-201ENST00000297350 SLCO1B3Q9NPD5 702 aa10.4□□□□□ -0.74
TNFRSF11B-201ENST00000297350 RAB6BQ9NRW1 208 aa10.4□□□□□ -0.74
TNFRSF11B-201ENST00000297350 ETNK2Q9NVF9 386 aa10.4□□□□□ -0.74
TNFRSF11B-201ENST00000297350 ZC3H7BQ9UGR2 993 aaKnown RBP10.4□□□□□ -0.74
TNFRSF11B-201ENST00000297350 GGT7Q9UJ14 662 aa10.4□□□□□ -0.74
TNFRSF11B-201ENST00000297350 PLXNB2O15031 1838 aa10.4□□□□□ -0.74
TNFRSF11B-201ENST00000297350 SF3B1O75533 1304 aaKnown RBP eCLIP10.4□□□□□ -0.75
TNFRSF11B-201ENST00000297350 TCRBV7S3A2A0A539 114 aa10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 RRN3P2A6NIE6 340 aa10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 COPEO14579 308 aa10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 KCNN4O15554 427 aa10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 CCDC22O60826 627 aa10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 BANF1O75531 89 aa10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 GJB1P08034 283 aa10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 PFKMP08237 780 aa10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 EFTUD2Q15029 972 aaKnown RBP eCLIP10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 TBCCQ15814 346 aa10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 KBTBD12Q3ZCT8 623 aa10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 MAP1SQ66K74 1059 aaPredicted RBP10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 ZNF449Q6P9G9 518 aa10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 CLNKQ7Z7G1 428 aa10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 PQLC3Q8N755 202 aa10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 FAM172AQ8WUF8 416 aa10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 SLC35F5Q8WV83 523 aa10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 NLRP7Q8WX94 980 aa10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 C7orf26Q96N11 449 aa10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 MMADHCQ9H3L0 296 aaPredicted RBP10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 POPDC2Q9HBU9 364 aa10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 CNTN3Q9P232 1028 aa10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 TTLL3Q9Y4R7 772 aa10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 PDCD11Q14690 1871 aaKnown RBP10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 A6NJR5 290 aa10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 I3L4J1 428 aa10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 BIRC5O15392 142 aa10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 XPOTO43592 962 aaKnown RBP10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 STRNO43815 780 aa10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 HAUS5O94927 633 aa10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 ANP32DO95626 131 aa10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 APOEP02649 317 aa10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 FAM163BP0C2L3 166 aa10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 CYP3A5P20815 502 aa10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 AXLP30530 894 aa10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 FDFT1P37268 417 aa10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 PNPLA4P41247 253 aa10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 BCAT1P54687 386 aa10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 GAD2Q05329 585 aa10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 IRF5Q13568 498 aa10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 PRKD1Q15139 912 aaPredicted RBP10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 E2F5Q15329 346 aa10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 ZNF792Q3KQV3 632 aa10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 SLC27A1Q6PCB7 646 aa10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 TIFABQ6ZNK6 161 aa10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 ZC3H18Q86VM9 953 aaKnown RBP10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 KIF2BQ8N4N8 673 aa10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 ENDOVQ8N8Q3 282 aaKnown RBP10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 MAB21L3Q8N8X9 362 aa10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 UBA3Q8TBC4 463 aa10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 SPOCK2Q92563 424 aa10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 QKIQ96PU8 341 aaKnown RBP eCLIP10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 NAT9Q9BTE0 207 aa10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 NRDE2Q9H7Z3 1164 aa10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 EIF2B3Q9NR50 452 aaKnown RBP10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 SLC5A4Q9NY91 659 aa10.39□□□□□ -0.75
TNFRSF11B-201ENST00000297350 LIN7AO14910 233 aaPredicted RBP10.38□□□□□ -0.75
TNFRSF11B-201ENST00000297350 STK10O94804 968 aaKnown RBP10.38□□□□□ -0.75
TNFRSF11B-201ENST00000297350 CD4P01730 458 aa10.38□□□□□ -0.75
TNFRSF11B-201ENST00000297350 IL4RP24394 825 aa10.38□□□□□ -0.75
TNFRSF11B-201ENST00000297350 SERPINB4P48594 390 aa10.38□□□□□ -0.75
TNFRSF11B-201ENST00000297350 ARFIP2P53365 341 aa10.38□□□□□ -0.75
TNFRSF11B-201ENST00000297350 BST2Q10589 180 aaKnown RBP10.38□□□□□ -0.75
TNFRSF11B-201ENST00000297350 SF3A3Q12874 501 aaKnown RBP eCLIP10.38□□□□□ -0.75
TNFRSF11B-201ENST00000297350 SNAPC2Q13487 334 aa10.38□□□□□ -0.75
TNFRSF11B-201ENST00000297350 TAF5Q15542 800 aa10.38□□□□□ -0.75
TNFRSF11B-201ENST00000297350 LDLRAD1Q5T700 205 aa10.38□□□□□ -0.75
TNFRSF11B-201ENST00000297350 TRNP1Q6NT89 227 aa10.38□□□□□ -0.75
TNFRSF11B-201ENST00000297350 TAPT1Q6NXT6 567 aa10.38□□□□□ -0.75
TNFRSF11B-201ENST00000297350 STRADAQ7RTN6 431 aa10.38□□□□□ -0.75
TNFRSF11B-201ENST00000297350 ARHGAP24Q8N264 748 aa10.38□□□□□ -0.75
TNFRSF11B-201ENST00000297350 GSDMBQ8TAX9 411 aa10.38□□□□□ -0.75
TNFRSF11B-201ENST00000297350 ACMSDQ8TDX5 336 aa10.38□□□□□ -0.75
TNFRSF11B-201ENST00000297350 COPS5Q92905 334 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms