RNA–Protein interactions for RNA: ENST00000296786.7

UBLCP1-201, Transcript of ubiquitin like domain containing CTD phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBLCP1, Length 2,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBLCP1-201ENST00000296786 BEST2Q8NFU1 509 aa9.67□□□□□ -0.86
UBLCP1-201ENST00000296786 MAML3Q96JK9 1138 aa9.67□□□□□ -0.86
UBLCP1-201ENST00000296786 MS4A4AQ96JQ5 239 aa9.67□□□□□ -0.86
UBLCP1-201ENST00000296786 OSMRQ99650 979 aa9.67□□□□□ -0.86
UBLCP1-201ENST00000296786 ZNF670Q9BS34 389 aa9.67□□□□□ -0.86
UBLCP1-201ENST00000296786 MYLK2Q9H1R3 596 aa9.67□□□□□ -0.86
UBLCP1-201ENST00000296786 NXF3Q9H4D5 531 aaKnown RBP9.67□□□□□ -0.86
UBLCP1-201ENST00000296786 ZNF408Q9H9D4 720 aa9.67□□□□□ -0.86
UBLCP1-201ENST00000296786 NOD2Q9HC29 1040 aa9.67□□□□□ -0.86
UBLCP1-201ENST00000296786 SLC17A7Q9P2U7 560 aa9.67□□□□□ -0.86
UBLCP1-201ENST00000296786 GJD2Q9UKL4 321 aa9.67□□□□□ -0.86
UBLCP1-201ENST00000296786 CHKBQ9Y259 395 aa9.67□□□□□ -0.86
UBLCP1-201ENST00000296786 IKBKGQ9Y6K9 419 aa9.67□□□□□ -0.86
UBLCP1-201ENST00000296786 USH1CQ9Y6N9 552 aa9.67□□□□□ -0.86
UBLCP1-201ENST00000296786 TSC2P49815 1807 aa9.67□□□□□ -0.86
UBLCP1-201ENST00000296786 IQANK1A0A1B0GTG1 560 aa9.67□□□□□ -0.86
UBLCP1-201ENST00000296786 BCLAF3A2AJT9 711 aaKnown RBP9.67□□□□□ -0.86
UBLCP1-201ENST00000296786 WDR91A4D1P6 747 aa9.67□□□□□ -0.86
UBLCP1-201ENST00000296786 CFAP69A5D8W1 941 aa9.67□□□□□ -0.86
UBLCP1-201ENST00000296786 A8MXQ7 604 aa9.67□□□□□ -0.86
UBLCP1-201ENST00000296786 TM9SF1O15321 606 aa9.67□□□□□ -0.86
UBLCP1-201ENST00000296786 GPR32O75388 356 aa9.67□□□□□ -0.86
UBLCP1-201ENST00000296786 KRT16P08779 473 aa9.67□□□□□ -0.86
UBLCP1-201ENST00000296786 YBX3P16989 372 aaKnown RBP eCLIP9.67□□□□□ -0.862e-7■■□□□ 13.3
UBLCP1-201ENST00000296786 DESP17661 470 aa9.67□□□□□ -0.86
UBLCP1-201ENST00000296786 ATXN1P54253 815 aaKnown RBP9.67□□□□□ -0.86
UBLCP1-201ENST00000296786 YWHAZP63104 245 aaKnown RBP9.67□□□□□ -0.86
UBLCP1-201ENST00000296786 ZNF200P98182 395 aaPredicted RBP9.67□□□□□ -0.86
UBLCP1-201ENST00000296786 C9orf57Q5W0N0 161 aa9.67□□□□□ -0.86
UBLCP1-201ENST00000296786 NOTUMQ6P988 496 aa9.67□□□□□ -0.86
UBLCP1-201ENST00000296786 ZNF276Q8N554 614 aa9.67□□□□□ -0.86
UBLCP1-201ENST00000296786 LRRC52Q8N7C0 313 aa9.67□□□□□ -0.86
UBLCP1-201ENST00000296786 C10orf82Q8WW14 230 aa9.67□□□□□ -0.86
UBLCP1-201ENST00000296786 SLC44A1Q8WWI5 657 aa9.67□□□□□ -0.86
UBLCP1-201ENST00000296786 ALKBH8Q96BT7 664 aaKnown RBP9.67□□□□□ -0.86
UBLCP1-201ENST00000296786 ERP27Q96DN0 273 aa9.67□□□□□ -0.86
UBLCP1-201ENST00000296786 GCOM2Q9BZD3 368 aaPredicted RBP9.67□□□□□ -0.86
UBLCP1-201ENST00000296786 ARHGEF3Q9NR81 526 aa9.67□□□□□ -0.86
UBLCP1-201ENST00000296786 ETNK2Q9NVF9 386 aa9.67□□□□□ -0.86
UBLCP1-201ENST00000296786 CEP350Q5VT06 3117 aa9.67□□□□□ -0.86
UBLCP1-201ENST00000296786 NUP205Q92621 2012 aa9.67□□□□□ -0.86
UBLCP1-201ENST00000296786 CCL15-CCL14A0A0B4J2E2 113 aa9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 SPAG6O75602 509 aa9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 RECQL4O94761 1208 aa9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 UNC5CO95185 931 aa9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 APRTP07741 180 aa9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 INHBAP08476 426 aa9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 CCDC130P13994 396 aa9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 AKAP5P24588 427 aa9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 CYP2F1P24903 491 aa9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 ADORA2BP29275 332 aa9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 SKIV2L2P42285 1042 aaKnown RBP9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 RIPK1Q13546 671 aa9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 GRB14Q14449 540 aa9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 SETDB1Q15047 1291 aa9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 CCL15Q16663 113 aa9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 ALKAL1Q6UXT8 129 aa9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 APBB1IPQ7Z5R6 666 aaPredicted RBP9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 PRPF39Q86UA1 669 aaKnown RBP9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 UNC93AQ86WB7 457 aa9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 VSIG1Q86XK7 387 aa9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 CEP57Q86XR8 500 aa9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 ZDHHC17Q8IUH5 632 aa9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 CCDC110Q8TBZ0 833 aa9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 MAGEC3Q8TD91 643 aa9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 STK32AQ8WU08 396 aa9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 CFAP36Q96G28 342 aa9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 SERAC1Q96JX3 654 aa9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 LRRC37BQ96QE4 947 aa9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 TINF2Q9BSI4 451 aa9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 APOL6Q9BWW8 343 aa9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 TRIM6Q9C030 488 aaPredicted RBP9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 KLC2Q9H0B6 622 aa9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 ABHD16BQ9H3Z7 469 aa9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 NRDE2Q9H7Z3 1164 aa9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 CNTN3Q9P232 1028 aa9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 MORF4L1Q9UBU8 362 aa9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 TRPM7Q96QT4 1865 aa9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 RRN3P2A6NIE6 340 aa9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 LPXNO60711 386 aa9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 MT-ND3P03897 115 aa9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 PDGFRBP09619 1106 aa9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 LCP1P13796 627 aa9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 L1CAMP32004 1257 aa9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 SLC8A1P32418 973 aa9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 PTPN9P43378 593 aa9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 SNX16P57768 344 aa9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 FAAP100Q0VG06 881 aa9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 BST2Q10589 180 aaKnown RBP9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 DPYSL2Q16555 572 aa9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 FBXO47Q5MNV8 452 aa9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 ARHGAP17Q68EM7 881 aa9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 CAND1Q86VP6 1230 aaKnown RBP9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 KBTBD7Q8WVZ9 684 aa9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 TBC1D31Q96DN5 1066 aa9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 C11orf84Q9BUA3 381 aaPredicted RBP9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 MAGEB5Q9BZ81 275 aa9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 DHX35Q9H5Z1 703 aaKnown RBP9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 ETNK1Q9HBU6 452 aa9.66□□□□□ -0.86
UBLCP1-201ENST00000296786 POPDC2Q9HBU9 364 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms