RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 PAFAH2Q99487 392 aa9.67□□□□□ -0.86
PRDM9-201ENST00000296682 CCDC134Q9H6E4 229 aa9.67□□□□□ -0.86
PRDM9-201ENST00000296682 CYP3A43Q9HB55 503 aa9.67□□□□□ -0.86
PRDM9-201ENST00000296682 NPHS2Q9NP85 383 aa9.67□□□□□ -0.86
PRDM9-201ENST00000296682 SNX10Q9Y5X0 201 aa9.67□□□□□ -0.86
PRDM9-201ENST00000296682 C5orf60A6NFR6 353 aa9.67□□□□□ -0.86
PRDM9-201ENST00000296682 IGF2BP3O00425 579 aaKnown RBP eCLIP9.67□□□□□ -0.86
PRDM9-201ENST00000296682 XPOTO43592 962 aaKnown RBP9.67□□□□□ -0.86
PRDM9-201ENST00000296682 TMEM63AO94886 807 aa9.67□□□□□ -0.86
PRDM9-201ENST00000296682 USP17L7P0C7H9 530 aa9.67□□□□□ -0.86
PRDM9-201ENST00000296682 FGFR1P11362 822 aa9.67□□□□□ -0.86
PRDM9-201ENST00000296682 ELNP15502 786 aa9.67□□□□□ -0.86
PRDM9-201ENST00000296682 ATICP31939 592 aa9.67□□□□□ -0.86
PRDM9-201ENST00000296682 PTPN7P35236 360 aa9.67□□□□□ -0.86
PRDM9-201ENST00000296682 MMP13P45452 471 aa9.67□□□□□ -0.86
PRDM9-201ENST00000296682 SOX4Q06945 474 aaPredicted RBP9.67□□□□□ -0.86
PRDM9-201ENST00000296682 KBTBD12Q3ZCT8 623 aa9.67□□□□□ -0.86
PRDM9-201ENST00000296682 KCNT2Q6UVM3 1135 aa9.67□□□□□ -0.86
PRDM9-201ENST00000296682 ZCCHC9Q8N567 271 aaKnown RBP9.67□□□□□ -0.86
PRDM9-201ENST00000296682 AGR3Q8TD06 166 aa9.67□□□□□ -0.86
PRDM9-201ENST00000296682 CCHCR1Q8TD31 782 aa9.67□□□□□ -0.86
PRDM9-201ENST00000296682 KLHL29Q96CT2 875 aa9.67□□□□□ -0.86
PRDM9-201ENST00000296682 CELF6Q96J87 481 aaKnown RBP9.67□□□□□ -0.86
PRDM9-201ENST00000296682 ROPN1BQ9BZX4 212 aaPredicted RBP9.67□□□□□ -0.86
PRDM9-201ENST00000296682 ROPN1Q9HAT0 212 aaPredicted RBP9.67□□□□□ -0.86
PRDM9-201ENST00000296682 TRIM33Q9UPN9 1127 aa9.67□□□□□ -0.86
PRDM9-201ENST00000296682 EIF4E1BA6NMX2 242 aaKnown RBP9.67□□□□□ -0.86
PRDM9-201ENST00000296682 GOLGA8TH3BQL2 631 aa9.67□□□□□ -0.86
PRDM9-201ENST00000296682 AP1G2O75843 785 aa9.67□□□□□ -0.86
PRDM9-201ENST00000296682 MAP2K5Q13163 448 aa9.67□□□□□ -0.86
PRDM9-201ENST00000296682 SETDB1Q15047 1291 aa9.67□□□□□ -0.86
PRDM9-201ENST00000296682 RFX8Q6ZV50 586 aa9.67□□□□□ -0.86
PRDM9-201ENST00000296682 CCDC185Q8N715 623 aa9.67□□□□□ -0.86
PRDM9-201ENST00000296682 USP6NLQ92738 828 aa9.67□□□□□ -0.86
PRDM9-201ENST00000296682 FAM111AQ96PZ2 611 aa9.67□□□□□ -0.86
PRDM9-201ENST00000296682 TBCBQ99426 244 aa9.67□□□□□ -0.86
PRDM9-201ENST00000296682 ARHGAP39Q9C0H5 1083 aa9.67□□□□□ -0.86
PRDM9-201ENST00000296682 KLC2Q9H0B6 622 aa9.67□□□□□ -0.86
PRDM9-201ENST00000296682 ADAM7Q9H2U9 754 aa9.67□□□□□ -0.86
PRDM9-201ENST00000296682 PCDH9Q9HC56 1237 aa9.67□□□□□ -0.86
PRDM9-201ENST00000296682 KRT82Q9NSB4 513 aa9.67□□□□□ -0.86
PRDM9-201ENST00000296682 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.67□□□□□ -0.86
PRDM9-201ENST00000296682 KLHL8Q9P2G9 620 aaPredicted RBP9.67□□□□□ -0.86
PRDM9-201ENST00000296682 PCDHGC3Q9UN70 934 aa9.67□□□□□ -0.86
PRDM9-201ENST00000296682 IPPQ9Y573 584 aa9.67□□□□□ -0.86
PRDM9-201ENST00000296682 FNDC1Q4ZHG4 1894 aaPredicted RBP9.66□□□□□ -0.86
PRDM9-201ENST00000296682 MYADML2A6NDP7 307 aa9.66□□□□□ -0.86
PRDM9-201ENST00000296682 DNM1LO00429 736 aa9.66□□□□□ -0.86
PRDM9-201ENST00000296682 TCEA3O75764 348 aa9.66□□□□□ -0.86
PRDM9-201ENST00000296682 UBOX5O94941 541 aa9.66□□□□□ -0.86
PRDM9-201ENST00000296682 ITGBL1O95965 494 aaPredicted RBP9.66□□□□□ -0.86
PRDM9-201ENST00000296682 PROZP22891 400 aa9.66□□□□□ -0.86
PRDM9-201ENST00000296682 ADRA1DP25100 572 aa9.66□□□□□ -0.86
PRDM9-201ENST00000296682 BRCC3P46736 316 aa9.66□□□□□ -0.86
PRDM9-201ENST00000296682 TKTL1P51854 596 aa9.66□□□□□ -0.86
PRDM9-201ENST00000296682 SNX16P57768 344 aa9.66□□□□□ -0.86
PRDM9-201ENST00000296682 PDE1BQ01064 536 aa9.66□□□□□ -0.86
PRDM9-201ENST00000296682 SLC25A11Q02978 314 aaKnown RBP9.66□□□□□ -0.86
PRDM9-201ENST00000296682 RNASELQ05823 741 aaKnown RBP9.66□□□□□ -0.86
PRDM9-201ENST00000296682 DEUP1Q05D60 604 aa9.66□□□□□ -0.86
PRDM9-201ENST00000296682 PTK7Q13308 1070 aa9.66□□□□□ -0.86
PRDM9-201ENST00000296682 OLIG2Q13516 323 aa9.66□□□□□ -0.86
PRDM9-201ENST00000296682 BOLA3Q53S33 107 aa9.66□□□□□ -0.86
PRDM9-201ENST00000296682 SDHAF4Q5VUM1 108 aa9.66□□□□□ -0.86
PRDM9-201ENST00000296682 TRNP1Q6NT89 227 aa9.66□□□□□ -0.86
PRDM9-201ENST00000296682 RHBDF2Q6PJF5 856 aa9.66□□□□□ -0.86
PRDM9-201ENST00000296682 VPS52Q8N1B4 723 aa9.66□□□□□ -0.86
PRDM9-201ENST00000296682 PDCD7Q8N8D1 485 aaKnown RBP9.66□□□□□ -0.86
PRDM9-201ENST00000296682 SHCBP1Q8NEM2 672 aa9.66□□□□□ -0.86
PRDM9-201ENST00000296682 PAAF1Q9BRP4 392 aa9.66□□□□□ -0.86
PRDM9-201ENST00000296682 OSBPL7Q9BZF2 842 aa9.66□□□□□ -0.86
PRDM9-201ENST00000296682 ETNK1Q9HBU6 452 aa9.66□□□□□ -0.86
PRDM9-201ENST00000296682 DDIT4Q9NX09 232 aa9.66□□□□□ -0.86
PRDM9-201ENST00000296682 ST3GAL5Q9UNP4 418 aa9.66□□□□□ -0.86
PRDM9-201ENST00000296682 NRCAMQ92823 1304 aa9.66□□□□□ -0.86
PRDM9-201ENST00000296682 CDH5P33151 784 aaPredicted RBP9.66□□□□□ -0.86
PRDM9-201ENST00000296682 CA8P35219 290 aa9.66□□□□□ -0.86
PRDM9-201ENST00000296682 GRM5P41594 1212 aa9.66□□□□□ -0.86
PRDM9-201ENST00000296682 BBS12Q6ZW61 710 aa9.66□□□□□ -0.86
PRDM9-201ENST00000296682 SPATA21Q7Z572 469 aa9.66□□□□□ -0.86
PRDM9-201ENST00000296682 PGBD4Q96DM1 585 aa9.66□□□□□ -0.86
PRDM9-201ENST00000296682 TNIP3Q96KP6 325 aa9.66□□□□□ -0.86
PRDM9-201ENST00000296682 RNF157Q96PX1 679 aa9.66□□□□□ -0.86
PRDM9-201ENST00000296682 FAM124BQ9H5Z6 455 aaPredicted RBP9.66□□□□□ -0.86
PRDM9-201ENST00000296682 ETNK2Q9NVF9 386 aa9.66□□□□□ -0.86
PRDM9-201ENST00000296682 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.66□□□□□ -0.86
PRDM9-201ENST00000296682 C2CD2Q9Y426 696 aa9.66□□□□□ -0.86
PRDM9-201ENST00000296682 CDY2AQ9Y6F7 541 aa9.66□□□□□ -0.86
PRDM9-201ENST00000296682 APOC4-APOC2K7ER74 178 aa9.66□□□□□ -0.86
PRDM9-201ENST00000296682 LPXNO60711 386 aa9.66□□□□□ -0.86
PRDM9-201ENST00000296682 BEST1O76090 585 aa9.66□□□□□ -0.86
PRDM9-201ENST00000296682 APOC2P02655 101 aa9.66□□□□□ -0.86
PRDM9-201ENST00000296682 PYGBP11216 843 aa9.66□□□□□ -0.86
PRDM9-201ENST00000296682 TPH1P17752 444 aa9.66□□□□□ -0.86
PRDM9-201ENST00000296682 KLRC2P26717 231 aa9.66□□□□□ -0.86
PRDM9-201ENST00000296682 ITKQ08881 620 aa9.66□□□□□ -0.86
PRDM9-201ENST00000296682 FAAP100Q0VG06 881 aa9.66□□□□□ -0.86
PRDM9-201ENST00000296682 HIC1Q14526 733 aa9.66□□□□□ -0.86
PRDM9-201ENST00000296682 MORF4L2Q15014 288 aa9.66□□□□□ -0.86
PRDM9-201ENST00000296682 FAM110CQ1W6H9 321 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms