RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 DYNLT1P63172 113 aa23.84■■□□□ 1.41
PTX3-201ENST00000295927 MMRN1Q13201 1228 aa23.84■■□□□ 1.41
PTX3-201ENST00000295927 DPYSL3Q14195 570 aa23.84■■□□□ 1.41
PTX3-201ENST00000295927 NFE2Q16621 373 aaPredicted RBP23.84■■□□□ 1.41
PTX3-201ENST00000295927 FAM153CQ494X1 144 aa23.84■■□□□ 1.41
PTX3-201ENST00000295927 BBS12Q6ZW61 710 aa23.84■■□□□ 1.41
PTX3-201ENST00000295927 SND1Q7KZF4 910 aaKnown RBP eCLIP23.84■■□□□ 1.41
PTX3-201ENST00000295927 GRK7Q8WTQ7 553 aa23.84■■□□□ 1.41
PTX3-201ENST00000295927 IRGQQ8WZA9 623 aa23.84■■□□□ 1.41
PTX3-201ENST00000295927 TOP1MTQ969P6 601 aa23.84■■□□□ 1.41
PTX3-201ENST00000295927 FAM153AQ9UHL3 310 aa23.84■■□□□ 1.41
PTX3-201ENST00000295927 FEZ2Q9UHY8 353 aaPredicted RBP23.84■■□□□ 1.41
PTX3-201ENST00000295927 STAP1Q9ULZ2 295 aa23.84■■□□□ 1.41
PTX3-201ENST00000295927 OR6C75A6NL08 312 aa23.83■■□□□ 1.41
PTX3-201ENST00000295927 LIASO43766 372 aa23.83■■□□□ 1.41
PTX3-201ENST00000295927 LTFP02788 710 aa23.83■■□□□ 1.41
PTX3-201ENST00000295927 ALDH7A1P49419 539 aaKnown RBP23.83■■□□□ 1.41
PTX3-201ENST00000295927 DRG2P55039 364 aaKnown RBP23.83■■□□□ 1.41
PTX3-201ENST00000295927 KRT81Q14533 505 aa23.83■■□□□ 1.41
PTX3-201ENST00000295927 PDK2Q15119 407 aa23.83■■□□□ 1.41
PTX3-201ENST00000295927 CA9Q16790 459 aa23.83■■□□□ 1.41
PTX3-201ENST00000295927 ERMARDQ5T6L9 678 aa23.83■■□□□ 1.41
PTX3-201ENST00000295927 TAS1R1Q7RTX1 841 aa23.83■■□□□ 1.41
PTX3-201ENST00000295927 BNIPLQ7Z465 357 aa23.83■■□□□ 1.41
PTX3-201ENST00000295927 RFX6Q8HWS3 928 aa23.83■■□□□ 1.41
PTX3-201ENST00000295927 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.83■■□□□ 1.41
PTX3-201ENST00000295927 CAVIN3Q969G5 261 aa23.83■■□□□ 1.41
PTX3-201ENST00000295927 HAUS1Q96CS2 278 aa23.83■■□□□ 1.41
PTX3-201ENST00000295927 CCDC114Q96M63 670 aa23.83■■□□□ 1.41
PTX3-201ENST00000295927 NEUROG2Q9H2A3 272 aa23.83■■□□□ 1.41
PTX3-201ENST00000295927 PCDH10Q9P2E7 1040 aa23.83■■□□□ 1.41
PTX3-201ENST00000295927 SNX24Q9Y343 169 aa23.83■■□□□ 1.41
PTX3-201ENST00000295927 USP3Q9Y6I4 520 aa23.83■■□□□ 1.41
PTX3-201ENST00000295927 CAPN9O14815 690 aa23.82■■□□□ 1.4
PTX3-201ENST00000295927 KRT17Q04695 432 aa23.82■■□□□ 1.4
PTX3-201ENST00000295927 PPP1R7Q15435 360 aa23.82■■□□□ 1.4
PTX3-201ENST00000295927 RTP2Q5QGT7 225 aa23.82■■□□□ 1.4
PTX3-201ENST00000295927 MFSD5Q6N075 450 aa23.82■■□□□ 1.4
PTX3-201ENST00000295927 MAP7D3Q8IWC1 876 aa23.82■■□□□ 1.4
PTX3-201ENST00000295927 SCML4Q8N228 414 aa23.82■■□□□ 1.4
PTX3-201ENST00000295927 SCAMP5Q8TAC9 235 aa23.82■■□□□ 1.4
PTX3-201ENST00000295927 FUBP3Q96I24 572 aaKnown RBP eCLIP23.82■■□□□ 1.4
PTX3-201ENST00000295927 PCDH18Q9HCL0 1135 aa23.82■■□□□ 1.4
PTX3-201ENST00000295927 DNPEPQ9ULA0 475 aa23.82■■□□□ 1.4
PTX3-201ENST00000295927 M0QYT0 321 aa23.82■■□□□ 1.4
PTX3-201ENST00000295927 AMHP03971 560 aa23.82■■□□□ 1.4
PTX3-201ENST00000295927 CAPN2P17655 700 aa23.82■■□□□ 1.4
PTX3-201ENST00000295927 DEFB103AP81534 67 aa23.82■■□□□ 1.4
PTX3-201ENST00000295927 DRICH1Q6PGQ1 229 aaPredicted RBP23.82■■□□□ 1.4
PTX3-201ENST00000295927 TMCO2Q7Z6W1 182 aaPredicted RBP23.82■■□□□ 1.4
PTX3-201ENST00000295927 SCN4BQ8IWT1 228 aa23.82■■□□□ 1.4
PTX3-201ENST00000295927 CCDC185Q8N715 623 aa23.82■■□□□ 1.4
PTX3-201ENST00000295927 PCDHB5Q9Y5E4 795 aa23.82■■□□□ 1.4
PTX3-201ENST00000295927 TNFRSF10BO14763 440 aa23.81■■□□□ 1.4
PTX3-201ENST00000295927 NCAM1P13591 858 aa23.81■■□□□ 1.4
PTX3-201ENST00000295927 NNTQ13423 1086 aa23.81■■□□□ 1.4
PTX3-201ENST00000295927 BYSLQ13895 437 aaKnown RBP23.81■■□□□ 1.4
PTX3-201ENST00000295927 SYDE1Q6ZW31 735 aaPredicted RBP23.81■■□□□ 1.4
PTX3-201ENST00000295927 FAM131BQ86XD5 332 aa23.81■■□□□ 1.4
PTX3-201ENST00000295927 TMEM199Q8N511 208 aa23.81■■□□□ 1.4
PTX3-201ENST00000295927 PGLYRP2Q96PD5 576 aa23.81■■□□□ 1.4
PTX3-201ENST00000295927 TTPALQ9BTX7 342 aa23.81■■□□□ 1.4
PTX3-201ENST00000295927 MAK16Q9BXY0 300 aaKnown RBP23.81■■□□□ 1.4
PTX3-201ENST00000295927 AP4E1Q9UPM8 1137 aa23.81■■□□□ 1.4
PTX3-201ENST00000295927 TBC1D4O60343 1298 aa23.8■■□□□ 1.4
PTX3-201ENST00000295927 IL4RP24394 825 aa23.8■■□□□ 1.4
PTX3-201ENST00000295927 RDXP35241 583 aaKnown RBP23.8■■□□□ 1.4
PTX3-201ENST00000295927 RPL21P46778 160 aaKnown RBP23.8■■□□□ 1.4
PTX3-201ENST00000295927 SLC5A3P53794 718 aa23.8■■□□□ 1.4
PTX3-201ENST00000295927 ARPP19P56211 112 aa23.8■■□□□ 1.4
PTX3-201ENST00000295927 FAM117BQ6P1L5 589 aa23.8■■□□□ 1.4
PTX3-201ENST00000295927 RSPO2Q6UXX9 243 aaPredicted RBP23.8■■□□□ 1.4
PTX3-201ENST00000295927 TTC13Q8NBP0 860 aa23.8■■□□□ 1.4
PTX3-201ENST00000295927 FAM71BQ8TC56 605 aa23.8■■□□□ 1.4
PTX3-201ENST00000295927 ZNF689Q96CS4 500 aaPredicted RBP23.8■■□□□ 1.4
PTX3-201ENST00000295927 RNF157Q96PX1 679 aa23.8■■□□□ 1.4
PTX3-201ENST00000295927 SAE1Q9UBE0 346 aaPredicted RBP23.8■■□□□ 1.4
PTX3-201ENST00000295927 MKI67P46013 3256 aaKnown RBP23.8■■□□□ 1.4
PTX3-201ENST00000295927 SYNJ2BP-COX16A0A087WUM0 186 aa23.8■■□□□ 1.4
PTX3-201ENST00000295927 H7C4K7 107 aa23.8■■□□□ 1.4
PTX3-201ENST00000295927 GAS8O95995 478 aa23.8■■□□□ 1.4
PTX3-201ENST00000295927 ACRP10323 421 aa23.8■■□□□ 1.4
PTX3-201ENST00000295927 OTUD4Q01804 1114 aaKnown RBP23.8■■□□□ 1.4
PTX3-201ENST00000295927 DEUP1Q05D60 604 aa23.8■■□□□ 1.4
PTX3-201ENST00000295927 DPYSL2Q16555 572 aa23.8■■□□□ 1.4
PTX3-201ENST00000295927 VSTM1Q6UX27 236 aa23.8■■□□□ 1.4
PTX3-201ENST00000295927 SLC7A14Q8TBB6 771 aa23.8■■□□□ 1.4
PTX3-201ENST00000295927 DHX35Q9H5Z1 703 aaKnown RBP23.8■■□□□ 1.4
PTX3-201ENST00000295927 FAM53CQ9NYF3 392 aa23.8■■□□□ 1.4
PTX3-201ENST00000295927 GRHL1Q9NZI5 618 aa23.8■■□□□ 1.4
PTX3-201ENST00000295927 COX16Q9P0S2 106 aa23.8■■□□□ 1.4
PTX3-201ENST00000295927 COL4A4P53420 1690 aaPredicted RBP23.8■■□□□ 1.4
PTX3-201ENST00000295927 MYO16Q9Y6X6 1858 aa23.79■■□□□ 1.4
PTX3-201ENST00000295927 EFEMP2O95967 443 aa23.79■■□□□ 1.4
PTX3-201ENST00000295927 L1CAMP32004 1257 aa23.79■■□□□ 1.4
PTX3-201ENST00000295927 VCPP55072 806 aaKnown RBP23.79■■□□□ 1.4
PTX3-201ENST00000295927 WDR5P61964 334 aaKnown RBP23.79■■□□□ 1.4
PTX3-201ENST00000295927 IFRD2Q12894 506 aaPredicted RBP23.79■■□□□ 1.4
PTX3-201ENST00000295927 NME3Q13232 169 aa23.79■■□□□ 1.4
PTX3-201ENST00000295927 PTK6Q13882 451 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms