RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 SOX10P56693 466 aa16.6■□□□□ 0.25
SSRP1-202ENST00000293880 ABATP80404 500 aa16.6■□□□□ 0.25
SSRP1-202ENST00000293880 TSHZ1Q6ZSZ6 1077 aa16.6■□□□□ 0.25
SSRP1-202ENST00000293880 VPS37AQ8NEZ2 397 aa16.6■□□□□ 0.25
SSRP1-202ENST00000293880 KRCC1Q9NPI7 259 aaPredicted RBP16.6■□□□□ 0.25
SSRP1-202ENST00000293880 TCF7P36402 384 aaPredicted RBP16.6■□□□□ 0.25
SSRP1-202ENST00000293880 ADARP55265 1226 aaKnown RBP16.6■□□□□ 0.25
SSRP1-202ENST00000293880 TADA1Q96BN2 335 aa16.6■□□□□ 0.25
SSRP1-202ENST00000293880 MXRA8Q9BRK3 442 aa16.6■□□□□ 0.25
SSRP1-202ENST00000293880 EIF3DO15371 548 aaKnown RBP eCLIP16.6■□□□□ 0.25
SSRP1-202ENST00000293880 AGKQ53H12 422 aa16.6■□□□□ 0.25
SSRP1-202ENST00000293880 EFHC1Q5JVL4 640 aa16.6■□□□□ 0.25
SSRP1-202ENST00000293880 C3orf67Q6ZVT6 689 aa16.6■□□□□ 0.25
SSRP1-202ENST00000293880 FUT8Q9BYC5 575 aa16.6■□□□□ 0.25
SSRP1-202ENST00000293880 CD4P01730 458 aa16.6■□□□□ 0.25
SSRP1-202ENST00000293880 ACADSBP45954 432 aa16.6■□□□□ 0.25
SSRP1-202ENST00000293880 NDUFA5Q16718 116 aa16.6■□□□□ 0.25
SSRP1-202ENST00000293880 CES3Q6UWW8 571 aa16.6■□□□□ 0.25
SSRP1-202ENST00000293880 RNF19BQ6ZMZ0 732 aa16.6■□□□□ 0.25
SSRP1-202ENST00000293880 VPS33BQ9H267 617 aa16.6■□□□□ 0.25
SSRP1-202ENST00000293880 OVOS2A0A0G2JMS6 1433 aa16.6■□□□□ 0.25
SSRP1-202ENST00000293880 OVOS2A0A0J9YW53 1432 aa16.6■□□□□ 0.25
SSRP1-202ENST00000293880 OVOS2Q6IE36 1432 aa16.6■□□□□ 0.25
SSRP1-202ENST00000293880 WDR27A2RRH5 827 aa16.6■□□□□ 0.25
SSRP1-202ENST00000293880 ZNF839A8K0R7 811 aa16.6■□□□□ 0.25
SSRP1-202ENST00000293880 GH1P01241 217 aa16.6■□□□□ 0.25
SSRP1-202ENST00000293880 CALB2P22676 271 aa16.6■□□□□ 0.25
SSRP1-202ENST00000293880 FDFT1P37268 417 aa16.6■□□□□ 0.25
SSRP1-202ENST00000293880 CYP2R1Q6VVX0 501 aa16.6■□□□□ 0.25
SSRP1-202ENST00000293880 FAM172AQ8WUF8 416 aa16.6■□□□□ 0.25
SSRP1-202ENST00000293880 CLEC4MQ9H2X3 399 aaPredicted RBP16.6■□□□□ 0.25
SSRP1-202ENST00000293880 TUBE1Q9UJT0 475 aa16.6■□□□□ 0.25
SSRP1-202ENST00000293880 TRAPPC3O43617 180 aa16.59■□□□□ 0.25
SSRP1-202ENST00000293880 CCNT2O60583 730 aaKnown RBP16.59■□□□□ 0.25
SSRP1-202ENST00000293880 VTNP04004 478 aa16.59■□□□□ 0.25
SSRP1-202ENST00000293880 APOA4P06727 396 aa16.59■□□□□ 0.25
SSRP1-202ENST00000293880 CLK2P49760 499 aaKnown RBP16.59■□□□□ 0.25
SSRP1-202ENST00000293880 STX5Q13190 355 aa16.59■□□□□ 0.25
SSRP1-202ENST00000293880 POLD3Q15054 466 aaPredicted RBP16.59■□□□□ 0.25
SSRP1-202ENST00000293880 EPHX4Q8IUS5 362 aa16.59■□□□□ 0.25
SSRP1-202ENST00000293880 C2orf81A6NN90 581 aa16.59■□□□□ 0.25
SSRP1-202ENST00000293880 SLC2A4P14672 509 aa16.59■□□□□ 0.25
SSRP1-202ENST00000293880 STILQ15468 1287 aa16.59■□□□□ 0.25
SSRP1-202ENST00000293880 TDRD10Q5VZ19 366 aaKnown RBP16.59■□□□□ 0.25
SSRP1-202ENST00000293880 TMEM26Q6ZUK4 368 aa16.59■□□□□ 0.25
SSRP1-202ENST00000293880 MIB1Q86YT6 1006 aa16.59■□□□□ 0.25
SSRP1-202ENST00000293880 PARP8Q8N3A8 854 aa16.59■□□□□ 0.25
SSRP1-202ENST00000293880 TIPINQ9BVW5 301 aa16.59■□□□□ 0.25
SSRP1-202ENST00000293880 SERHL2Q9H4I8 314 aa16.59■□□□□ 0.25
SSRP1-202ENST00000293880 RIBC2Q9H4K1 309 aa16.59■□□□□ 0.25
SSRP1-202ENST00000293880 EFCAB1Q9HAE3 211 aa16.59■□□□□ 0.25
SSRP1-202ENST00000293880 SERHLQ9NQF3 203 aa16.59■□□□□ 0.25
SSRP1-202ENST00000293880 TMEM51Q9NW97 253 aa16.59■□□□□ 0.25
SSRP1-202ENST00000293880 ARMCX1Q9P291 453 aa16.59■□□□□ 0.25
SSRP1-202ENST00000293880 A0A087X0T9 212 aa16.59■□□□□ 0.25
SSRP1-202ENST00000293880 STX7O15400 261 aaKnown RBP16.59■□□□□ 0.25
SSRP1-202ENST00000293880 FAM228BP0C875 321 aa16.59■□□□□ 0.25
SSRP1-202ENST00000293880 ACAP1Q15027 740 aa16.59■□□□□ 0.25
SSRP1-202ENST00000293880 UGT3A1Q6NUS8 523 aa16.59■□□□□ 0.25
SSRP1-202ENST00000293880 PABPC3Q9H361 631 aaKnown RBP16.59■□□□□ 0.25
SSRP1-202ENST00000293880 NRDE2Q9H7Z3 1164 aa16.59■□□□□ 0.25
SSRP1-202ENST00000293880 SLC25A13Q9UJS0 675 aa16.59■□□□□ 0.25
SSRP1-202ENST00000293880 DUSP12Q9UNI6 340 aa16.59■□□□□ 0.25
SSRP1-202ENST00000293880 VPS26AO75436 327 aa16.59■□□□□ 0.25
SSRP1-202ENST00000293880 NECAB2Q7Z6G3 386 aa16.59■□□□□ 0.25
SSRP1-202ENST00000293880 ATP8B4Q8TF62 1192 aa16.59■□□□□ 0.25
SSRP1-202ENST00000293880 CFAP99D6REC4 459 aa16.59■□□□□ 0.25
SSRP1-202ENST00000293880 GCLCP48506 637 aaPredicted RBP16.59■□□□□ 0.25
SSRP1-202ENST00000293880 ZBTB49Q6ZSB9 765 aa16.59■□□□□ 0.25
SSRP1-202ENST00000293880 PODNQ7Z5L7 613 aa16.59■□□□□ 0.25
SSRP1-202ENST00000293880 LINC00523Q86TU6 105 aa16.59■□□□□ 0.25
SSRP1-202ENST00000293880 MYLK2Q9H1R3 596 aa16.59■□□□□ 0.25
SSRP1-202ENST00000293880 KCNH7Q9NS40 1196 aa16.59■□□□□ 0.25
SSRP1-202ENST00000293880 LRRC7Q96NW7 1537 aa16.59■□□□□ 0.25
SSRP1-202ENST00000293880 P4HA2O15460 535 aa16.58■□□□□ 0.25
SSRP1-202ENST00000293880 ZCCHC23Q6ZST2 131 aa16.58■□□□□ 0.25
SSRP1-202ENST00000293880 COMMD2Q86X83 199 aa16.58■□□□□ 0.25
SSRP1-202ENST00000293880 EMC1Q8N766 993 aa16.58■□□□□ 0.25
SSRP1-202ENST00000293880 POU5F2Q8N7G0 328 aa16.58■□□□□ 0.25
SSRP1-202ENST00000293880 EXD1Q8NHP7 514 aa16.58■□□□□ 0.25
SSRP1-202ENST00000293880 AGPAT3Q9NRZ7 376 aa16.58■□□□□ 0.25
SSRP1-202ENST00000293880 RBMX2Q9Y388 322 aaKnown RBP16.58■□□□□ 0.25
SSRP1-202ENST00000293880 QRICH2Q9H0J4 1663 aa16.58■□□□□ 0.25
SSRP1-202ENST00000293880 HS6ST1O60243 411 aa16.58■□□□□ 0.25
SSRP1-202ENST00000293880 ASS1P00966 412 aaKnown RBP16.58■□□□□ 0.25
SSRP1-202ENST00000293880 GRB10Q13322 594 aa16.58■□□□□ 0.25
SSRP1-202ENST00000293880 OLFM1Q99784 485 aa16.58■□□□□ 0.25
SSRP1-202ENST00000293880 AHCYL1O43865 530 aa16.58■□□□□ 0.24
SSRP1-202ENST00000293880 MED24O75448 989 aa16.58■□□□□ 0.24
SSRP1-202ENST00000293880 CCNIQ14094 377 aa16.58■□□□□ 0.24
SSRP1-202ENST00000293880 NCF4Q15080 339 aa16.58■□□□□ 0.24
SSRP1-202ENST00000293880 ADGRA3Q8IWK6 1321 aa16.58■□□□□ 0.24
SSRP1-202ENST00000293880 RPRD1AQ96P16 312 aaPredicted RBP16.58■□□□□ 0.24
SSRP1-202ENST00000293880 PSMD11O00231 422 aa16.58■□□□□ 0.24
SSRP1-202ENST00000293880 WEE1P30291 646 aa16.58■□□□□ 0.24
SSRP1-202ENST00000293880 HALP42357 657 aa16.58■□□□□ 0.24
SSRP1-202ENST00000293880 GEMP55040 296 aa16.58■□□□□ 0.24
SSRP1-202ENST00000293880 NFIXQ14938 502 aa16.58■□□□□ 0.24
SSRP1-202ENST00000293880 INAQ16352 499 aa16.58■□□□□ 0.24
SSRP1-202ENST00000293880 FAM45BPQ6NSW5 357 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms