RNA–Protein interactions for RNA: ENST00000293845.7

CCDC42-201, Transcript of coiled-coil domain containing 42, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC42, Length 1,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-201ENST00000293845 NCOR1O75376 2440 aa13.88□□□□□ -0.19
CCDC42-201ENST00000293845 A0A087X0T9 212 aa13.87□□□□□ -0.19
CCDC42-201ENST00000293845 TRAV19A0A0A6YYK7 116 aa13.87□□□□□ -0.19
CCDC42-201ENST00000293845 TLR5O60602 858 aa13.87□□□□□ -0.19
CCDC42-201ENST00000293845 RTN2O75298 545 aa13.87□□□□□ -0.19
CCDC42-201ENST00000293845 ABL1P00519 1130 aa13.87□□□□□ -0.19
CCDC42-201ENST00000293845 LTFP02788 710 aa13.87□□□□□ -0.19
CCDC42-201ENST00000293845 CALB1P05937 261 aa13.87□□□□□ -0.19
CCDC42-201ENST00000293845 FAM228BP0C875 321 aa13.87□□□□□ -0.19
CCDC42-201ENST00000293845 RALAP11233 206 aa13.87□□□□□ -0.19
CCDC42-201ENST00000293845 RARGP13631 454 aa13.87□□□□□ -0.19
CCDC42-201ENST00000293845 SLC7A9P82251 487 aa13.87□□□□□ -0.19
CCDC42-201ENST00000293845 SLC6A3Q01959 620 aa13.87□□□□□ -0.19
CCDC42-201ENST00000293845 ZNF268Q14587 947 aaPredicted RBP13.87□□□□□ -0.19
CCDC42-201ENST00000293845 SLC18A3Q16572 532 aa13.87□□□□□ -0.19
CCDC42-201ENST00000293845 EFHC1Q5JVL4 640 aa13.87□□□□□ -0.19
CCDC42-201ENST00000293845 BTBD8Q5XKL5 378 aa13.87□□□□□ -0.19
CCDC42-201ENST00000293845 OR6B2Q6IFH4 312 aa13.87□□□□□ -0.19
CCDC42-201ENST00000293845 HFE2Q6ZVN8 426 aa13.87□□□□□ -0.19
CCDC42-201ENST00000293845 TADA2BQ86TJ2 420 aa13.87□□□□□ -0.19
CCDC42-201ENST00000293845 MCOLN2Q8IZK6 566 aa13.87□□□□□ -0.19
CCDC42-201ENST00000293845 ZSCAN18Q8TBC5 510 aaPredicted RBP13.87□□□□□ -0.19
CCDC42-201ENST00000293845 GOLGA1Q92805 767 aa13.87□□□□□ -0.19
CCDC42-201ENST00000293845 SMARCD2Q92925 531 aa13.87□□□□□ -0.19
CCDC42-201ENST00000293845 RPGRIP1Q96KN7 1286 aa13.87□□□□□ -0.19
CCDC42-201ENST00000293845 SLC22A12Q96S37 553 aa13.87□□□□□ -0.19
CCDC42-201ENST00000293845 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.87□□□□□ -0.19
CCDC42-201ENST00000293845 TRIM62Q9BVG3 475 aa13.87□□□□□ -0.19
CCDC42-201ENST00000293845 ISCUQ9H1K1 167 aa13.87□□□□□ -0.19
CCDC42-201ENST00000293845 CCSER2Q9H7U1 834 aa13.87□□□□□ -0.19
CCDC42-201ENST00000293845 TRPC7Q9HCX4 862 aa13.87□□□□□ -0.19
CCDC42-201ENST00000293845 ABCC13Q9NSE7 274 aa13.87□□□□□ -0.19
CCDC42-201ENST00000293845 ADAM22Q9P0K1 906 aa13.87□□□□□ -0.19
CCDC42-201ENST00000293845 C19orf67A6NJJ6 358 aa13.86□□□□□ -0.19
CCDC42-201ENST00000293845 ANHXE9PGG2 379 aa13.86□□□□□ -0.19
CCDC42-201ENST00000293845 COCHO43405 550 aa13.86□□□□□ -0.19
CCDC42-201ENST00000293845 HSF2BPO75031 334 aa13.86□□□□□ -0.19
CCDC42-201ENST00000293845 FYNP06241 537 aa13.86□□□□□ -0.19
CCDC42-201ENST00000293845 CKMP06732 381 aa13.86□□□□□ -0.19
CCDC42-201ENST00000293845 TCF3P15923 654 aa13.86□□□□□ -0.19
CCDC42-201ENST00000293845 HDCP19113 662 aa13.86□□□□□ -0.19
CCDC42-201ENST00000293845 SP100P23497 879 aaPredicted RBP13.86□□□□□ -0.19
CCDC42-201ENST00000293845 FCARP24071 287 aa13.86□□□□□ -0.19
CCDC42-201ENST00000293845 AVPR1AP37288 418 aa13.86□□□□□ -0.19
CCDC42-201ENST00000293845 GSDMDP57764 484 aa13.86□□□□□ -0.19
CCDC42-201ENST00000293845 C2CD6Q53TS8 623 aa13.86□□□□□ -0.19
CCDC42-201ENST00000293845 TJAP1Q5JTD0 557 aa13.86□□□□□ -0.19
CCDC42-201ENST00000293845 FAM78AQ5JUQ0 283 aa13.86□□□□□ -0.19
CCDC42-201ENST00000293845 MSANTD2Q6P1R3 559 aa13.86□□□□□ -0.19
CCDC42-201ENST00000293845 MTSS1LQ765P7 747 aa13.86□□□□□ -0.19
CCDC42-201ENST00000293845 ARCQ7LC44 396 aa13.86□□□□□ -0.19
CCDC42-201ENST00000293845 ARID3BQ8IVW6 561 aaPredicted RBP13.86□□□□□ -0.19
CCDC42-201ENST00000293845 ARL14EPQ8N8R7 260 aaPredicted RBP13.86□□□□□ -0.19
CCDC42-201ENST00000293845 KHSRPQ92945 711 aaKnown RBP eCLIP13.86□□□□□ -0.19
CCDC42-201ENST00000293845 FAM149B1Q96BN6 582 aa13.86□□□□□ -0.19
CCDC42-201ENST00000293845 CCDC42Q96M95 316 aa13.86□□□□□ -0.19
CCDC42-201ENST00000293845 RNF38Q9H0F5 515 aa13.86□□□□□ -0.19
CCDC42-201ENST00000293845 DEF6Q9H4E7 631 aa13.86□□□□□ -0.19
CCDC42-201ENST00000293845 NHEJ1Q9H9Q4 299 aaPredicted RBP13.86□□□□□ -0.19
CCDC42-201ENST00000293845 KIF9Q9HAQ2 790 aa13.86□□□□□ -0.19
CCDC42-201ENST00000293845 POPDC2Q9HBU9 364 aa13.86□□□□□ -0.19
CCDC42-201ENST00000293845 OLA1Q9NTK5 396 aaKnown RBP13.86□□□□□ -0.19
CCDC42-201ENST00000293845 OBP2AQ9NY56 170 aa13.86□□□□□ -0.19
CCDC42-201ENST00000293845 ARHGAP26Q9UNA1 814 aa13.86□□□□□ -0.19
CCDC42-201ENST00000293845 UNC80Q8N2C7 3258 aa13.86□□□□□ -0.19
CCDC42-201ENST00000293845 TCRBV5S1A1TA0A578 114 aa13.85□□□□□ -0.19
CCDC42-201ENST00000293845 TMCO5BA8MYB1 307 aa13.85□□□□□ -0.19
CCDC42-201ENST00000293845 AKR1B10O60218 316 aa13.85□□□□□ -0.19
CCDC42-201ENST00000293845 PRAMEF12O95522 483 aa13.85□□□□□ -0.19
CCDC42-201ENST00000293845 FTLP02792 175 aaPredicted RBP13.85□□□□□ -0.19
CCDC42-201ENST00000293845 ATP5C1P36542 298 aaKnown RBP13.85□□□□□ -0.19
CCDC42-201ENST00000293845 YWHAZP63104 245 aaKnown RBP13.85□□□□□ -0.19
CCDC42-201ENST00000293845 HTR4Q13639 388 aa13.85□□□□□ -0.19
CCDC42-201ENST00000293845 FAM102AQ5T9C2 384 aaPredicted RBP13.85□□□□□ -0.19
CCDC42-201ENST00000293845 ALKBH5Q6P6C2 394 aaKnown RBP13.85□□□□□ -0.19
CCDC42-201ENST00000293845 C3orf20Q8ND61 904 aa13.85□□□□□ -0.19
CCDC42-201ENST00000293845 USP13Q92995 863 aaPredicted RBP13.85□□□□□ -0.19
CCDC42-201ENST00000293845 NXPE3Q969Y0 559 aa13.85□□□□□ -0.19
CCDC42-201ENST00000293845 E2F7Q96AV8 911 aa13.85□□□□□ -0.19
CCDC42-201ENST00000293845 SLC2A13Q96QE2 648 aa13.85□□□□□ -0.19
CCDC42-201ENST00000293845 CYP2S1Q96SQ9 504 aa13.85□□□□□ -0.19
CCDC42-201ENST00000293845 TDP1Q9NUW8 608 aa13.85□□□□□ -0.19
CCDC42-201ENST00000293845 TMEM59LQ9UK28 342 aa13.85□□□□□ -0.19
CCDC42-201ENST00000293845 FAM170AA1A519 330 aa13.84□□□□□ -0.19
CCDC42-201ENST00000293845 ECI2O75521 394 aa13.84□□□□□ -0.19
CCDC42-201ENST00000293845 DAB1O75553 588 aa13.84□□□□□ -0.19
CCDC42-201ENST00000293845 MYBL1P10243 752 aa13.84□□□□□ -0.19
CCDC42-201ENST00000293845 MBL2P11226 248 aaPredicted RBP13.84□□□□□ -0.19
CCDC42-201ENST00000293845 GFPT1Q06210 699 aaPredicted RBP13.84□□□□□ -0.19
CCDC42-201ENST00000293845 TAF5Q15542 800 aa13.84□□□□□ -0.19
CCDC42-201ENST00000293845 C10orf120Q5SQS8 335 aa13.84□□□□□ -0.19
CCDC42-201ENST00000293845 RSRC2Q7L4I2 434 aaKnown RBP13.84□□□□□ -0.19
CCDC42-201ENST00000293845 TMTC1Q8IUR5 882 aa13.84□□□□□ -0.19
CCDC42-201ENST00000293845 TMEM139Q8IV31 216 aa13.84□□□□□ -0.19
CCDC42-201ENST00000293845 CCDC170Q8IYT3 715 aa13.84□□□□□ -0.19
CCDC42-201ENST00000293845 CELF5Q8N6W0 485 aaKnown RBP13.84□□□□□ -0.19
CCDC42-201ENST00000293845 RNF139Q8WU17 664 aa13.84□□□□□ -0.19
CCDC42-201ENST00000293845 EDEM1Q92611 657 aa13.84□□□□□ -0.19
CCDC42-201ENST00000293845 FGF14Q92915 247 aa13.84□□□□□ -0.19
CCDC42-201ENST00000293845 ELSPBP1Q96BH3 223 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms