RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 CDYLQ9Y232 598 aa12.26□□□□□ -0.45
SYNGAP1-201ENST00000293748 MYH6P13533 1939 aa12.26□□□□□ -0.45
SYNGAP1-201ENST00000293748 MYL2P10916 166 aa12.26□□□□□ -0.45
SYNGAP1-201ENST00000293748 ATP6V1B1P15313 513 aa12.26□□□□□ -0.45
SYNGAP1-201ENST00000293748 EFNA5P52803 228 aa12.26□□□□□ -0.45
SYNGAP1-201ENST00000293748 CAP1Q01518 475 aa12.26□□□□□ -0.45
SYNGAP1-201ENST00000293748 ABHD15Q6UXT9 468 aa12.26□□□□□ -0.45
SYNGAP1-201ENST00000293748 DMGDHQ9UI17 866 aaKnown RBP12.26□□□□□ -0.45
SYNGAP1-201ENST00000293748 A0A0G2JMZ2 1700 aa12.26□□□□□ -0.45
SYNGAP1-201ENST00000293748 C3orf70A6NLC5 250 aaPredicted RBP12.26□□□□□ -0.45
SYNGAP1-201ENST00000293748 PJA2O43164 708 aa12.26□□□□□ -0.45
SYNGAP1-201ENST00000293748 SNUPNO95149 360 aaKnown RBP12.26□□□□□ -0.45
SYNGAP1-201ENST00000293748 CLK1P49759 484 aaKnown RBP12.26□□□□□ -0.45
SYNGAP1-201ENST00000293748 MAP3K7CLP57077 242 aa12.26□□□□□ -0.45
SYNGAP1-201ENST00000293748 BTKQ06187 659 aa12.26□□□□□ -0.45
SYNGAP1-201ENST00000293748 ST3GAL1Q11201 340 aa12.26□□□□□ -0.45
SYNGAP1-201ENST00000293748 FOXD4Q12950 439 aaPredicted RBP12.26□□□□□ -0.45
SYNGAP1-201ENST00000293748 ZNF677Q86XU0 584 aa12.26□□□□□ -0.45
SYNGAP1-201ENST00000293748 PPIL6Q8IXY8 311 aa12.26□□□□□ -0.45
SYNGAP1-201ENST00000293748 ASTN1O14525 1302 aa12.26□□□□□ -0.45
SYNGAP1-201ENST00000293748 LGR5O75473 907 aa12.25□□□□□ -0.45
SYNGAP1-201ENST00000293748 SKOR1P84550 965 aa12.25□□□□□ -0.45
SYNGAP1-201ENST00000293748 NFX1Q12986 1120 aaKnown RBP12.25□□□□□ -0.45
SYNGAP1-201ENST00000293748 KYAT1Q16773 422 aa12.25□□□□□ -0.45
SYNGAP1-201ENST00000293748 TTC33Q6PID6 262 aaPredicted RBP12.25□□□□□ -0.45
SYNGAP1-201ENST00000293748 ATXN7L3BQ96GX2 97 aa12.25□□□□□ -0.45
SYNGAP1-201ENST00000293748 MBOAT7Q96N66 472 aa12.25□□□□□ -0.45
SYNGAP1-201ENST00000293748 REEP2Q9BRK0 252 aa12.25□□□□□ -0.45
SYNGAP1-201ENST00000293748 CAAP1Q9H8G2 361 aa12.25□□□□□ -0.45
SYNGAP1-201ENST00000293748 RSAD1Q9HA92 442 aa12.25□□□□□ -0.45
SYNGAP1-201ENST00000293748 HEY2Q9UBP5 337 aa12.25□□□□□ -0.45
SYNGAP1-201ENST00000293748 TRPV2Q9Y5S1 764 aa12.25□□□□□ -0.45
SYNGAP1-201ENST00000293748 EIF3DO15371 548 aaKnown RBP eCLIP12.25□□□□□ -0.45
SYNGAP1-201ENST00000293748 RBP3P10745 1247 aa12.25□□□□□ -0.45
SYNGAP1-201ENST00000293748 STX5Q13190 355 aa12.25□□□□□ -0.45
SYNGAP1-201ENST00000293748 DMC1Q14565 340 aa12.25□□□□□ -0.45
SYNGAP1-201ENST00000293748 MXD4Q14582 209 aaPredicted RBP12.25□□□□□ -0.45
SYNGAP1-201ENST00000293748 THEM5Q8N1Q8 247 aa12.25□□□□□ -0.45
SYNGAP1-201ENST00000293748 KLF6Q99612 283 aaPredicted RBP12.25□□□□□ -0.45
SYNGAP1-201ENST00000293748 EPAS1Q99814 870 aa12.25□□□□□ -0.45
SYNGAP1-201ENST00000293748 ABCF3Q9NUQ8 709 aa12.25□□□□□ -0.45
SYNGAP1-201ENST00000293748 WDR70Q9NW82 654 aa12.25□□□□□ -0.45
SYNGAP1-201ENST00000293748 RHBDL2Q9NX52 303 aa12.25□□□□□ -0.45
SYNGAP1-201ENST00000293748 SCN3BQ9NY72 215 aa12.25□□□□□ -0.45
SYNGAP1-201ENST00000293748 COPG1Q9Y678 874 aaKnown RBP12.25□□□□□ -0.45
SYNGAP1-201ENST00000293748 LOC100653049A0A140TA62 436 aa12.25□□□□□ -0.45
SYNGAP1-201ENST00000293748 FKBP6O75344 327 aa12.25□□□□□ -0.45
SYNGAP1-201ENST00000293748 KRT34O76011 436 aa12.25□□□□□ -0.45
SYNGAP1-201ENST00000293748 RGS20O76081 388 aa12.25□□□□□ -0.45
SYNGAP1-201ENST00000293748 CPA2P48052 419 aa12.25□□□□□ -0.45
SYNGAP1-201ENST00000293748 SNRPFP62306 86 aaKnown RBP12.25□□□□□ -0.45
SYNGAP1-201ENST00000293748 USP10Q14694 798 aaKnown RBP12.25□□□□□ -0.45
SYNGAP1-201ENST00000293748 C6orf10Q5SRN2 563 aa12.25□□□□□ -0.45
SYNGAP1-201ENST00000293748 EFCAB12Q6NXP0 572 aa12.25□□□□□ -0.45
SYNGAP1-201ENST00000293748 CCDC60Q8IWA6 550 aaPredicted RBP12.25□□□□□ -0.45
SYNGAP1-201ENST00000293748 PPHLN1Q8NEY8 458 aaKnown RBP12.25□□□□□ -0.45
SYNGAP1-201ENST00000293748 ACTRT1Q8TDG2 376 aa12.25□□□□□ -0.45
SYNGAP1-201ENST00000293748 ASAP3Q8TDY4 903 aa12.25□□□□□ -0.45
SYNGAP1-201ENST00000293748 ZSWIM1Q9BR11 485 aa12.25□□□□□ -0.45
SYNGAP1-201ENST00000293748 GPR182O15218 404 aa12.25□□□□□ -0.45
SYNGAP1-201ENST00000293748 RPS6KA5O75582 802 aa12.25□□□□□ -0.45
SYNGAP1-201ENST00000293748 PDGFRAP16234 1089 aa12.25□□□□□ -0.45
SYNGAP1-201ENST00000293748 KIAA1841Q6NSI8 718 aa12.25□□□□□ -0.45
SYNGAP1-201ENST00000293748 TAGAPQ8N103 731 aa12.25□□□□□ -0.45
SYNGAP1-201ENST00000293748 OTUB1Q96FW1 271 aaPredicted RBP12.25□□□□□ -0.45
SYNGAP1-201ENST00000293748 RNPEPQ9H4A4 650 aa12.25□□□□□ -0.45
SYNGAP1-201ENST00000293748 KLHL11Q9NVR0 708 aa12.25□□□□□ -0.45
SYNGAP1-201ENST00000293748 HAO1Q9UJM8 370 aa12.25□□□□□ -0.45
SYNGAP1-201ENST00000293748 HPSEQ9Y251 543 aa12.25□□□□□ -0.45
SYNGAP1-201ENST00000293748 SERPINI2O75830 405 aa12.24□□□□□ -0.45
SYNGAP1-201ENST00000293748 FGBP02675 491 aa12.24□□□□□ -0.45
SYNGAP1-201ENST00000293748 DDX5P17844 614 aaKnown RBP12.24□□□□□ -0.45
SYNGAP1-201ENST00000293748 CALB2P22676 271 aa12.24□□□□□ -0.45
SYNGAP1-201ENST00000293748 RPA1P27694 616 aa12.24□□□□□ -0.45
SYNGAP1-201ENST00000293748 ATP6V1E1P36543 226 aa12.24□□□□□ -0.45
SYNGAP1-201ENST00000293748 NPEPPSP55786 919 aa12.24□□□□□ -0.45
SYNGAP1-201ENST00000293748 CHI3L2Q15782 390 aa12.24□□□□□ -0.45
SYNGAP1-201ENST00000293748 KBTBD12Q3ZCT8 623 aa12.24□□□□□ -0.45
SYNGAP1-201ENST00000293748 ACBD5Q5T8D3 534 aaPredicted RBP12.24□□□□□ -0.45
SYNGAP1-201ENST00000293748 LRRC8DQ7L1W4 858 aa12.24□□□□□ -0.45
SYNGAP1-201ENST00000293748 RRM2BQ7LG56 351 aa12.24□□□□□ -0.45
SYNGAP1-201ENST00000293748 MICU2Q8IYU8 434 aa12.24□□□□□ -0.45
SYNGAP1-201ENST00000293748 ETNPPLQ8TBG4 499 aa12.24□□□□□ -0.45
SYNGAP1-201ENST00000293748 SNRNP27Q8WVK2 155 aaKnown RBP12.24□□□□□ -0.45
SYNGAP1-201ENST00000293748 CNBD2Q96M20 576 aa12.24□□□□□ -0.45
SYNGAP1-201ENST00000293748 TASP1Q9H6P5 420 aa12.24□□□□□ -0.45
SYNGAP1-201ENST00000293748 ANKZF1Q9H8Y5 726 aa12.24□□□□□ -0.45
SYNGAP1-201ENST00000293748 SARS2Q9NP81 518 aaKnown RBP12.24□□□□□ -0.45
SYNGAP1-201ENST00000293748 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.24□□□□□ -0.45
SYNGAP1-201ENST00000293748 SMIM35A0A1B0GVV1 85 aa12.24□□□□□ -0.45
SYNGAP1-201ENST00000293748 UBA6A0AVT1 1052 aaPredicted RBP12.24□□□□□ -0.45
SYNGAP1-201ENST00000293748 F5H423 210 aaPredicted RBP12.24□□□□□ -0.45
SYNGAP1-201ENST00000293748 ZNF197O14709 1029 aa12.24□□□□□ -0.45
SYNGAP1-201ENST00000293748 ATP6V1G2O95670 118 aa12.24□□□□□ -0.45
SYNGAP1-201ENST00000293748 ALBP02768 609 aa12.24□□□□□ -0.45
SYNGAP1-201ENST00000293748 STAG3L1P0CL83 205 aa12.24□□□□□ -0.45
SYNGAP1-201ENST00000293748 SYN1P17600 705 aa12.24□□□□□ -0.45
SYNGAP1-201ENST00000293748 SP2Q02086 613 aa12.24□□□□□ -0.45
SYNGAP1-201ENST00000293748 IKBKEQ14164 716 aa12.24□□□□□ -0.45
SYNGAP1-201ENST00000293748 IFNEQ86WN2 208 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms