RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 TMCO5AQ8N6Q1 288 aa17.83■□□□□ 0.45
SHANK1-201ENST00000293441 CASKIN2Q8WXE0 1202 aa17.83■□□□□ 0.45
SHANK1-201ENST00000293441 ILKAPQ9H0C8 392 aaPredicted RBP17.83■□□□□ 0.45
SHANK1-201ENST00000293441 LRRC40Q9H9A6 602 aa17.83■□□□□ 0.45
SHANK1-201ENST00000293441 VTA1Q9NP79 307 aa17.83■□□□□ 0.45
SHANK1-201ENST00000293441 ADCY3O60266 1144 aa17.83■□□□□ 0.45
SHANK1-201ENST00000293441 NCKAP1LP55160 1127 aa17.83■□□□□ 0.45
SHANK1-201ENST00000293441 MAPK7Q13164 816 aa17.83■□□□□ 0.45
SHANK1-201ENST00000293441 CHMP1BQ7LBR1 199 aa17.83■□□□□ 0.45
SHANK1-201ENST00000293441 MIER2Q8N344 545 aa17.83■□□□□ 0.45
SHANK1-201ENST00000293441 NOA1Q8NC60 698 aaKnown RBP17.83■□□□□ 0.45
SHANK1-201ENST00000293441 ZNF333Q96JL9 665 aa17.83■□□□□ 0.45
SHANK1-201ENST00000293441 PDGFDQ9GZP0 370 aaPredicted RBP17.83■□□□□ 0.45
SHANK1-201ENST00000293441 USP20Q9Y2K6 914 aa17.83■□□□□ 0.45
SHANK1-201ENST00000293441 MRPL42Q9Y6G3 142 aaKnown RBP17.83■□□□□ 0.45
SHANK1-201ENST00000293441 SNCAIPQ9Y6H5 919 aa17.83■□□□□ 0.45
SHANK1-201ENST00000293441 F8VZ95 297 aa17.83■□□□□ 0.44
SHANK1-201ENST00000293441 BEX3Q00994 111 aa17.83■□□□□ 0.44
SHANK1-201ENST00000293441 PLOD1Q02809 727 aaPredicted RBP17.83■□□□□ 0.44
SHANK1-201ENST00000293441 PTAR1Q7Z6K3 402 aaPredicted RBP17.83■□□□□ 0.44
SHANK1-201ENST00000293441 ENGASEQ8NFI3 743 aa17.83■□□□□ 0.44
SHANK1-201ENST00000293441 ABHD16BQ9H3Z7 469 aa17.83■□□□□ 0.44
SHANK1-201ENST00000293441 IL17RBQ9NRM6 502 aa17.83■□□□□ 0.44
SHANK1-201ENST00000293441 THG1LQ9NWX6 298 aaKnown RBP17.83■□□□□ 0.44
SHANK1-201ENST00000293441 BARX2Q9UMQ3 279 aaPredicted RBP17.83■□□□□ 0.44
SHANK1-201ENST00000293441 MORC2Q9Y6X9 1032 aaPredicted RBP17.83■□□□□ 0.44
SHANK1-201ENST00000293441 GLRA3O75311 464 aa17.83■□□□□ 0.44
SHANK1-201ENST00000293441 CNTN2Q02246 1040 aa17.83■□□□□ 0.44
SHANK1-201ENST00000293441 DEPDC1Q5TB30 811 aa17.83■□□□□ 0.44
SHANK1-201ENST00000293441 ADCK1Q86TW2 530 aa17.83■□□□□ 0.44
SHANK1-201ENST00000293441 TSPAN16Q9UKR8 245 aa17.83■□□□□ 0.44
SHANK1-201ENST00000293441 DUSP10Q9Y6W6 482 aa17.83■□□□□ 0.44
SHANK1-201ENST00000293441 MICAL2O94851 1124 aa17.83■□□□□ 0.44
SHANK1-201ENST00000293441 CCR1P32246 355 aa17.83■□□□□ 0.44
SHANK1-201ENST00000293441 STRA8Q7Z7C7 330 aa17.83■□□□□ 0.44
SHANK1-201ENST00000293441 PLD3Q8IV08 490 aa17.83■□□□□ 0.44
SHANK1-201ENST00000293441 MDM1Q8TC05 714 aa17.83■□□□□ 0.44
SHANK1-201ENST00000293441 OLFM3Q96PB7 478 aa17.83■□□□□ 0.44
SHANK1-201ENST00000293441 KBTBD4Q9NVX7 518 aa17.83■□□□□ 0.44
SHANK1-201ENST00000293441 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.83■□□□□ 0.44
SHANK1-201ENST00000293441 EIF3HO15372 352 aaKnown RBP eCLIP17.83■□□□□ 0.44
SHANK1-201ENST00000293441 GLP2RO95838 553 aa17.83■□□□□ 0.44
SHANK1-201ENST00000293441 GRK3P35626 688 aa17.83■□□□□ 0.44
SHANK1-201ENST00000293441 TBX4P57082 545 aa17.83■□□□□ 0.44
SHANK1-201ENST00000293441 OVGP1Q12889 678 aa17.83■□□□□ 0.44
SHANK1-201ENST00000293441 LRRC8BQ6P9F7 803 aa17.83■□□□□ 0.44
SHANK1-201ENST00000293441 LNPEPQ9UIQ6 1025 aa17.83■□□□□ 0.44
SHANK1-201ENST00000293441 MAPK9P45984 424 aa17.82■□□□□ 0.44
SHANK1-201ENST00000293441 DNAJC3Q13217 504 aa17.82■□□□□ 0.44
SHANK1-201ENST00000293441 ERMARDQ5T6L9 678 aa17.82■□□□□ 0.44
SHANK1-201ENST00000293441 RD3Q7Z3Z2 195 aa17.82■□□□□ 0.44
SHANK1-201ENST00000293441 AGGF1Q8N302 714 aaeCLIP17.82■□□□□ 0.44
SHANK1-201ENST00000293441 LRRIQ1Q96JM4 1722 aa17.82■□□□□ 0.44
SHANK1-201ENST00000293441 NWD1Q149M9 1564 aa17.82■□□□□ 0.44
SHANK1-201ENST00000293441 TCRBV5S4A2TA0A5A2 114 aa17.82■□□□□ 0.44
SHANK1-201ENST00000293441 ITGB6P18564 788 aa17.82■□□□□ 0.44
SHANK1-201ENST00000293441 HSD17B3P37058 310 aa17.82■□□□□ 0.44
SHANK1-201ENST00000293441 EIF2B5Q13144 721 aaKnown RBP17.82■□□□□ 0.44
SHANK1-201ENST00000293441 STARD3Q14849 445 aa17.82■□□□□ 0.44
SHANK1-201ENST00000293441 SLC9A5Q14940 896 aa17.82■□□□□ 0.44
SHANK1-201ENST00000293441 ANKS6Q68DC2 871 aa17.82■□□□□ 0.44
SHANK1-201ENST00000293441 C11orf63Q6NUN7 778 aa17.82■□□□□ 0.44
SHANK1-201ENST00000293441 SLC27A1Q6PCB7 646 aa17.82■□□□□ 0.44
SHANK1-201ENST00000293441 BBS7Q8IWZ6 715 aa17.82■□□□□ 0.44
SHANK1-201ENST00000293441 COLGALT1Q8NBJ5 622 aa17.82■□□□□ 0.44
SHANK1-201ENST00000293441 SENP6Q9GZR1 1112 aaPredicted RBP17.82■□□□□ 0.44
SHANK1-201ENST00000293441 FBXO44Q9H4M3 255 aa17.82■□□□□ 0.44
SHANK1-201ENST00000293441 LSM8O95777 96 aaKnown RBP17.82■□□□□ 0.44
SHANK1-201ENST00000293441 NUDT2P50583 147 aa17.82■□□□□ 0.44
SHANK1-201ENST00000293441 SV2AQ7L0J3 742 aa17.82■□□□□ 0.44
SHANK1-201ENST00000293441 ARID3BQ8IVW6 561 aaPredicted RBP17.82■□□□□ 0.44
SHANK1-201ENST00000293441 MMGT1Q8N4V1 131 aa17.82■□□□□ 0.44
SHANK1-201ENST00000293441 LPCAT1Q8NF37 534 aa17.82■□□□□ 0.44
SHANK1-201ENST00000293441 SERPINB12Q96P63 405 aa17.82■□□□□ 0.44
SHANK1-201ENST00000293441 DDX4Q9NQI0 724 aaKnown RBP17.82■□□□□ 0.44
SHANK1-201ENST00000293441 SERPINB5P36952 375 aa17.82■□□□□ 0.44
SHANK1-201ENST00000293441 TTI2Q6NXR4 508 aa17.82■□□□□ 0.44
SHANK1-201ENST00000293441 TRPM8Q7Z2W7 1104 aa17.82■□□□□ 0.44
SHANK1-201ENST00000293441 RNF208Q9H0X6 261 aa17.82■□□□□ 0.44
SHANK1-201ENST00000293441 OSGEPQ9NPF4 335 aa17.82■□□□□ 0.44
SHANK1-201ENST00000293441 MRGBPQ9NV56 204 aa17.82■□□□□ 0.44
SHANK1-201ENST00000293441 ZNF438Q7Z4V0 828 aa17.82■□□□□ 0.44
SHANK1-201ENST00000293441 EPS8L3Q8TE67 593 aaKnown RBP17.82■□□□□ 0.44
SHANK1-201ENST00000293441 CEP41Q9BYV8 373 aa17.82■□□□□ 0.44
SHANK1-201ENST00000293441 FGFR1P11362 822 aa17.81■□□□□ 0.44
SHANK1-201ENST00000293441 AMPD2Q01433 879 aa17.81■□□□□ 0.44
SHANK1-201ENST00000293441 DNAAF5Q86Y56 855 aa17.81■□□□□ 0.44
SHANK1-201ENST00000293441 CNDP1Q96KN2 507 aa17.81■□□□□ 0.44
SHANK1-201ENST00000293441 SALL1Q9NSC2 1324 aa17.81■□□□□ 0.44
SHANK1-201ENST00000293441 C16orf96A6NNT2 1141 aa17.81■□□□□ 0.44
SHANK1-201ENST00000293441 LACTBL1A8MY62 500 aa17.81■□□□□ 0.44
SHANK1-201ENST00000293441 SETD3Q86TU7 594 aaPredicted RBP17.81■□□□□ 0.44
SHANK1-201ENST00000293441 KIF2BQ8N4N8 673 aa17.81■□□□□ 0.44
SHANK1-201ENST00000293441 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.81■□□□□ 0.44
SHANK1-201ENST00000293441 PLAGL2Q9UPG8 496 aa17.81■□□□□ 0.44
SHANK1-201ENST00000293441 TIMM44O43615 452 aa17.81■□□□□ 0.44
SHANK1-201ENST00000293441 NDUFB5O43674 189 aa17.81■□□□□ 0.44
SHANK1-201ENST00000293441 PKN1Q16512 942 aa17.81■□□□□ 0.44
SHANK1-201ENST00000293441 DRG1Q9Y295 367 aaKnown RBP17.81■□□□□ 0.44
SHANK1-201ENST00000293441 SMARCD1Q96GM5 515 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms