RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 ACDQ96AP0 544 aa10.06□□□□□ -0.8
HMHB1-201ENST00000289448 ZC3H10Q96K80 434 aaKnown RBP10.06□□□□□ -0.8
HMHB1-201ENST00000289448 HEXIM2Q96MH2 286 aaKnown RBP10.06□□□□□ -0.8
HMHB1-201ENST00000289448 PNKPQ96T60 521 aa10.06□□□□□ -0.8
HMHB1-201ENST00000289448 DUSP9Q99956 384 aaKnown RBP10.06□□□□□ -0.8
HMHB1-201ENST00000289448 DUSP16Q9BY84 665 aa10.06□□□□□ -0.8
HMHB1-201ENST00000289448 NACA2Q9H009 215 aa10.06□□□□□ -0.8
HMHB1-201ENST00000289448 DUSP15Q9H1R2 295 aaPredicted RBP10.06□□□□□ -0.8
HMHB1-201ENST00000289448 ARRDC1-AS1Q9H2J1 176 aa10.06□□□□□ -0.8
HMHB1-201ENST00000289448 SMOC1Q9H4F8 434 aa10.06□□□□□ -0.8
HMHB1-201ENST00000289448 PNPLA8Q9NP80 782 aa10.06□□□□□ -0.8
HMHB1-201ENST00000289448 ARHGEF4Q9NR80 690 aa10.06□□□□□ -0.8
HMHB1-201ENST00000289448 TLR8Q9NR97 1041 aaKnown RBP10.06□□□□□ -0.8
HMHB1-201ENST00000289448 SPHK2Q9NRA0 654 aa10.06□□□□□ -0.8
HMHB1-201ENST00000289448 RXFP3Q9NSD7 469 aa10.06□□□□□ -0.8
HMHB1-201ENST00000289448 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.06□□□□□ -0.8
HMHB1-201ENST00000289448 RMND1Q9NWS8 449 aa10.06□□□□□ -0.8
HMHB1-201ENST00000289448 MMP17Q9ULZ9 603 aa10.06□□□□□ -0.8
HMHB1-201ENST00000289448 INVSQ9Y283 1065 aa10.06□□□□□ -0.8
HMHB1-201ENST00000289448 SH3BP1Q9Y3L3 701 aa10.06□□□□□ -0.8
HMHB1-201ENST00000289448 USP3Q9Y6I4 520 aa10.06□□□□□ -0.8
HMHB1-201ENST00000289448 EML5Q05BV3 1969 aa10.06□□□□□ -0.8
HMHB1-201ENST00000289448 KIAA1549LQ6ZVL6 1849 aa10.05□□□□□ -0.8
HMHB1-201ENST00000289448 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.05□□□□□ -0.8
HMHB1-201ENST00000289448 GOLGA6L4A6NEF3 574 aa10.05□□□□□ -0.8
HMHB1-201ENST00000289448 TULP2O00295 520 aa10.05□□□□□ -0.8
HMHB1-201ENST00000289448 SLC16A3O15427 465 aaKnown RBP10.05□□□□□ -0.8
HMHB1-201ENST00000289448 ADAM23O75077 832 aa10.05□□□□□ -0.8
HMHB1-201ENST00000289448 TULP3O75386 442 aa10.05□□□□□ -0.8
HMHB1-201ENST00000289448 EPN2O95208 641 aa10.05□□□□□ -0.8
HMHB1-201ENST00000289448 SMC2O95347 1197 aa10.05□□□□□ -0.8
HMHB1-201ENST00000289448 KLF8O95600 359 aaPredicted RBP10.05□□□□□ -0.8
HMHB1-201ENST00000289448 APODP05090 189 aa10.05□□□□□ -0.8
HMHB1-201ENST00000289448 RARGP13631 454 aa10.05□□□□□ -0.8
HMHB1-201ENST00000289448 TIE1P35590 1138 aa10.05□□□□□ -0.8
HMHB1-201ENST00000289448 ATP5C1P36542 298 aaKnown RBP10.05□□□□□ -0.8
HMHB1-201ENST00000289448 EIF2DP41214 584 aaKnown RBP10.05□□□□□ -0.8
HMHB1-201ENST00000289448 GRIA2P42262 883 aa10.05□□□□□ -0.8
HMHB1-201ENST00000289448 DGKEP52429 567 aa10.05□□□□□ -0.8
HMHB1-201ENST00000289448 MRPS21P82921 87 aaKnown RBP10.05□□□□□ -0.8
HMHB1-201ENST00000289448 FKBP3Q00688 224 aaKnown RBP10.05□□□□□ -0.8
HMHB1-201ENST00000289448 GAD2Q05329 585 aa10.05□□□□□ -0.8
HMHB1-201ENST00000289448 SF3A2Q15428 464 aaKnown RBP10.05□□□□□ -0.8
HMHB1-201ENST00000289448 CRY1Q16526 586 aa10.05□□□□□ -0.8
HMHB1-201ENST00000289448 DCAF17Q5H9S7 520 aaPredicted RBP10.05□□□□□ -0.8
HMHB1-201ENST00000289448 RASSF3Q86WH2 238 aa10.05□□□□□ -0.8
HMHB1-201ENST00000289448 MIB1Q86YT6 1006 aa10.05□□□□□ -0.8
HMHB1-201ENST00000289448 TXNDC5Q8NBS9 432 aaKnown RBP10.05□□□□□ -0.8
HMHB1-201ENST00000289448 MDGA1Q8NFP4 955 aa10.05□□□□□ -0.8
HMHB1-201ENST00000289448 TSTD1Q8NFU3 115 aa10.05□□□□□ -0.8
HMHB1-201ENST00000289448 SMARCE1Q969G3 411 aa10.05□□□□□ -0.8
HMHB1-201ENST00000289448 SLC35C1Q96A29 364 aa10.05□□□□□ -0.8
HMHB1-201ENST00000289448 OTUB2Q96DC9 234 aa10.05□□□□□ -0.8
HMHB1-201ENST00000289448 CCDC34Q96HJ3 373 aa10.05□□□□□ -0.8
HMHB1-201ENST00000289448 TMEM176AQ96HP8 235 aa10.05□□□□□ -0.8
HMHB1-201ENST00000289448 FAXDC2Q96IV6 333 aa10.05□□□□□ -0.8
HMHB1-201ENST00000289448 LOXL4Q96JB6 756 aa10.05□□□□□ -0.8
HMHB1-201ENST00000289448 TIGD1Q96MW7 591 aa10.05□□□□□ -0.8
HMHB1-201ENST00000289448 TPSD1Q9BZJ3 242 aa10.05□□□□□ -0.8
HMHB1-201ENST00000289448 MAN1B1Q9UKM7 699 aa10.05□□□□□ -0.8
HMHB1-201ENST00000289448 CDV3Q9UKY7 258 aaKnown RBP10.05□□□□□ -0.8
HMHB1-201ENST00000289448 COQ4Q9Y3A0 265 aa10.05□□□□□ -0.8
HMHB1-201ENST00000289448 MYH10P35580 1976 aa10.05□□□□□ -0.8
HMHB1-201ENST00000289448 TBC1D3BA6NDS4 549 aa10.04□□□□□ -0.8
HMHB1-201ENST00000289448 STX10O60499 249 aa10.04□□□□□ -0.8
HMHB1-201ENST00000289448 GADD45BO75293 160 aaPredicted RBP10.04□□□□□ -0.8
HMHB1-201ENST00000289448 KLKB1P03952 638 aa10.04□□□□□ -0.8
HMHB1-201ENST00000289448 BCKDHBP21953 392 aa10.04□□□□□ -0.8
HMHB1-201ENST00000289448 TNFRSF4P43489 277 aa10.04□□□□□ -0.8
HMHB1-201ENST00000289448 LRRC63Q05C16 580 aa10.04□□□□□ -0.8
HMHB1-201ENST00000289448 ANO4Q32M45 955 aa10.04□□□□□ -0.8
HMHB1-201ENST00000289448 RAB41Q5JT25 222 aa10.04□□□□□ -0.8
HMHB1-201ENST00000289448 PLA2G2CQ5R387 149 aa10.04□□□□□ -0.8
HMHB1-201ENST00000289448 C10orf120Q5SQS8 335 aa10.04□□□□□ -0.8
HMHB1-201ENST00000289448 TCERG1LQ5VWI1 586 aa10.04□□□□□ -0.8
HMHB1-201ENST00000289448 ARHGAP17Q68EM7 881 aa10.04□□□□□ -0.8
HMHB1-201ENST00000289448 ANO7Q6IWH7 933 aa10.04□□□□□ -0.8
HMHB1-201ENST00000289448 KLHDC10Q6PID8 442 aa10.04□□□□□ -0.8
HMHB1-201ENST00000289448 Q6ZNB5 142 aa10.04□□□□□ -0.8
HMHB1-201ENST00000289448 BHLHA9Q7RTU4 235 aa10.04□□□□□ -0.8
HMHB1-201ENST00000289448 CCDC186Q7Z3E2 898 aa10.04□□□□□ -0.8
HMHB1-201ENST00000289448 TTC30AQ86WT1 665 aa10.04□□□□□ -0.8
HMHB1-201ENST00000289448 UBR7Q8N806 425 aa10.04□□□□□ -0.8
HMHB1-201ENST00000289448 CCDC150Q8NCX0 1101 aa10.04□□□□□ -0.8
HMHB1-201ENST00000289448 CCDC26Q8TAB7 109 aa10.04□□□□□ -0.8
HMHB1-201ENST00000289448 NDRG1Q92597 394 aaKnown RBP10.04□□□□□ -0.8
HMHB1-201ENST00000289448 CNOT6LQ96LI5 555 aaKnown RBP10.04□□□□□ -0.8
HMHB1-201ENST00000289448 TSG101Q99816 390 aa10.04□□□□□ -0.8
HMHB1-201ENST00000289448 RTKNQ9BST9 563 aa10.04□□□□□ -0.8
HMHB1-201ENST00000289448 DNMT3LQ9UJW3 386 aa10.04□□□□□ -0.8
HMHB1-201ENST00000289448 NAGPAQ9UK23 515 aa10.04□□□□□ -0.8
HMHB1-201ENST00000289448 RALGAPA1Q6GYQ0 2036 aa10.04□□□□□ -0.8
HMHB1-201ENST00000289448 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.03□□□□□ -0.8
HMHB1-201ENST00000289448 PPP1R3GB7ZBB8 358 aa10.03□□□□□ -0.8
HMHB1-201ENST00000289448 NEDD8-MDP1E9PL57 170 aa10.03□□□□□ -0.8
HMHB1-201ENST00000289448 SLC30A4O14863 429 aa10.03□□□□□ -0.8
HMHB1-201ENST00000289448 STC2O76061 302 aa10.03□□□□□ -0.8
HMHB1-201ENST00000289448 ZNF806P0C7X5 589 aa10.03□□□□□ -0.8
HMHB1-201ENST00000289448 TRIM21P19474 475 aaKnown RBP10.03□□□□□ -0.8
HMHB1-201ENST00000289448 SDHBP21912 280 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms