RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 TMEM119Q4V9L6 283 aa18.06■□□□□ 0.48
PCDHA13-201ENST00000289272 NUP93Q8N1F7 819 aa18.06■□□□□ 0.48
PCDHA13-201ENST00000289272 NDEL1Q9GZM8 345 aa18.06■□□□□ 0.48
PCDHA13-201ENST00000289272 TMEM39BQ9GZU3 492 aa18.06■□□□□ 0.48
PCDHA13-201ENST00000289272 PRDM16Q9HAZ2 1276 aa18.06■□□□□ 0.48
PCDHA13-201ENST00000289272 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.06■□□□□ 0.48
PCDHA13-201ENST00000289272 CCL15-CCL14A0A0B4J2E2 113 aa18.06■□□□□ 0.48
PCDHA13-201ENST00000289272 CPA3P15088 417 aa18.06■□□□□ 0.48
PCDHA13-201ENST00000289272 KRT20P35900 424 aa18.06■□□□□ 0.48
PCDHA13-201ENST00000289272 TPI1P60174 286 aa18.06■□□□□ 0.48
PCDHA13-201ENST00000289272 KCNJ2P63252 427 aa18.06■□□□□ 0.48
PCDHA13-201ENST00000289272 C1QBPQ07021 282 aaKnown RBP18.06■□□□□ 0.48
PCDHA13-201ENST00000289272 CCL15Q16663 113 aa18.06■□□□□ 0.48
PCDHA13-201ENST00000289272 CLEC16AQ2KHT3 1053 aa18.06■□□□□ 0.48
PCDHA13-201ENST00000289272 MFSD5Q6N075 450 aa18.06■□□□□ 0.48
PCDHA13-201ENST00000289272 TCP10LQ8TDR4 215 aa18.06■□□□□ 0.48
PCDHA13-201ENST00000289272 LBHD1Q9BQE6 289 aaPredicted RBP18.06■□□□□ 0.48
PCDHA13-201ENST00000289272 RRN3Q9NYV6 651 aa18.06■□□□□ 0.48
PCDHA13-201ENST00000289272 ADAM30Q9UKF2 790 aa18.06■□□□□ 0.48
PCDHA13-201ENST00000289272 ANKRD6Q9Y2G4 727 aa18.06■□□□□ 0.48
PCDHA13-201ENST00000289272 ATP9BO43861 1147 aa18.05■□□□□ 0.48
PCDHA13-201ENST00000289272 PAEPP09466 180 aa18.05■□□□□ 0.48
PCDHA13-201ENST00000289272 ITGA4P13612 1032 aa18.05■□□□□ 0.48
PCDHA13-201ENST00000289272 ANPEPP15144 967 aa18.05■□□□□ 0.48
PCDHA13-201ENST00000289272 HLA-DPA1P20036 260 aa18.05■□□□□ 0.48
PCDHA13-201ENST00000289272 RPS6P62753 249 aaKnown RBP18.05■□□□□ 0.48
PCDHA13-201ENST00000289272 ANGPTL8Q6UXH0 198 aa18.05■□□□□ 0.48
PCDHA13-201ENST00000289272 ART4Q93070 314 aa18.05■□□□□ 0.48
PCDHA13-201ENST00000289272 UBE2OQ9C0C9 1292 aaKnown RBP18.05■□□□□ 0.48
PCDHA13-201ENST00000289272 PRR23D1E9PI22 279 aaPredicted RBP18.05■□□□□ 0.48
PCDHA13-201ENST00000289272 PRR23D2P0DMB1 279 aaPredicted RBP18.05■□□□□ 0.48
PCDHA13-201ENST00000289272 TCN1P20061 433 aaPredicted RBP18.05■□□□□ 0.48
PCDHA13-201ENST00000289272 CEP78Q5JTW2 689 aa18.05■□□□□ 0.48
PCDHA13-201ENST00000289272 EFHBQ8N7U6 833 aa18.05■□□□□ 0.48
PCDHA13-201ENST00000289272 TCF7L2Q9NQB0 619 aa18.05■□□□□ 0.48
PCDHA13-201ENST00000289272 ADARB2Q9NS39 739 aaKnown RBP18.05■□□□□ 0.48
PCDHA13-201ENST00000289272 INTS13Q9NVM9 706 aa18.05■□□□□ 0.48
PCDHA13-201ENST00000289272 PIN4Q9Y237 131 aaKnown RBP18.05■□□□□ 0.48
PCDHA13-201ENST00000289272 PRR23AA6NEV1 266 aa18.05■□□□□ 0.48
PCDHA13-201ENST00000289272 ZNF23P17027 643 aa18.05■□□□□ 0.48
PCDHA13-201ENST00000289272 CPT1AP50416 773 aa18.05■□□□□ 0.48
PCDHA13-201ENST00000289272 TAAR1Q96RJ0 339 aa18.05■□□□□ 0.48
PCDHA13-201ENST00000289272 LZTS3O60299 673 aaPredicted RBP18.05■□□□□ 0.48
PCDHA13-201ENST00000289272 COL9A3Q14050 684 aaPredicted RBP18.05■□□□□ 0.48
PCDHA13-201ENST00000289272 ZNF720Q7Z2F6 126 aa18.05■□□□□ 0.48
PCDHA13-201ENST00000289272 TAGAPQ8N103 731 aa18.05■□□□□ 0.48
PCDHA13-201ENST00000289272 BORCS5Q969J3 196 aa18.05■□□□□ 0.48
PCDHA13-201ENST00000289272 NUDT12Q9BQG2 462 aa18.05■□□□□ 0.48
PCDHA13-201ENST00000289272 TMEM245Q9H330 911 aa18.05■□□□□ 0.48
PCDHA13-201ENST00000289272 LRRC40Q9H9A6 602 aa18.05■□□□□ 0.48
PCDHA13-201ENST00000289272 LRRC4BQ9NT99 713 aa18.05■□□□□ 0.48
PCDHA13-201ENST00000289272 KIAA1257Q9ULG3 409 aa18.05■□□□□ 0.48
PCDHA13-201ENST00000289272 ZSCAN5CA6NGD5 496 aaPredicted RBP18.04■□□□□ 0.48
PCDHA13-201ENST00000289272 CCDC166P0CW27 439 aa18.04■□□□□ 0.48
PCDHA13-201ENST00000289272 BMP6P22004 513 aa18.04■□□□□ 0.48
PCDHA13-201ENST00000289272 ADORA2BP29275 332 aa18.04■□□□□ 0.48
PCDHA13-201ENST00000289272 TP53BP2Q13625 1128 aa18.04■□□□□ 0.48
PCDHA13-201ENST00000289272 TMEM132DQ14C87 1099 aa18.04■□□□□ 0.48
PCDHA13-201ENST00000289272 TMEM63BQ5T3F8 832 aa18.04■□□□□ 0.48
PCDHA13-201ENST00000289272 THEMIS2Q5TEJ8 643 aa18.04■□□□□ 0.48
PCDHA13-201ENST00000289272 PI4K2AQ9BTU6 479 aa18.04■□□□□ 0.48
PCDHA13-201ENST00000289272 KIAA1683Q9H0B3 1180 aa18.04■□□□□ 0.48
PCDHA13-201ENST00000289272 DDX18Q9NVP1 670 aaKnown RBP18.04■□□□□ 0.48
PCDHA13-201ENST00000289272 FARP1Q9Y4F1 1045 aaPredicted RBP18.04■□□□□ 0.48
PCDHA13-201ENST00000289272 RAD51Q06609 339 aa18.04■□□□□ 0.48
PCDHA13-201ENST00000289272 DGKDQ16760 1214 aa18.04■□□□□ 0.48
PCDHA13-201ENST00000289272 BTBD8Q5XKL5 378 aa18.04■□□□□ 0.48
PCDHA13-201ENST00000289272 DUPD1Q68J44 220 aa18.04■□□□□ 0.48
PCDHA13-201ENST00000289272 ARCQ7LC44 396 aa18.04■□□□□ 0.48
PCDHA13-201ENST00000289272 TMEM139Q8IV31 216 aa18.04■□□□□ 0.48
PCDHA13-201ENST00000289272 SLC22A9Q8IVM8 553 aa18.04■□□□□ 0.48
PCDHA13-201ENST00000289272 ACER1Q8TDN7 264 aa18.04■□□□□ 0.48
PCDHA13-201ENST00000289272 FAM53CQ9NYF3 392 aa18.04■□□□□ 0.48
PCDHA13-201ENST00000289272 C15orf38-AP3S2A0A0A6YYH1 394 aa18.04■□□□□ 0.48
PCDHA13-201ENST00000289272 MAGEB16A2A368 324 aa18.04■□□□□ 0.48
PCDHA13-201ENST00000289272 SNTNA6NMZ2 147 aa18.04■□□□□ 0.48
PCDHA13-201ENST00000289272 CBX6O95503 412 aa18.04■□□□□ 0.48
PCDHA13-201ENST00000289272 SLC1A6P48664 564 aa18.04■□□□□ 0.48
PCDHA13-201ENST00000289272 FKBP1AP62942 108 aaKnown RBP18.04■□□□□ 0.48
PCDHA13-201ENST00000289272 SAMD4BQ5PRF9 694 aaKnown RBP18.04■□□□□ 0.48
PCDHA13-201ENST00000289272 ARPINQ7Z6K5 226 aa18.04■□□□□ 0.48
PCDHA13-201ENST00000289272 TFB1MQ8WVM0 346 aaKnown RBP18.04■□□□□ 0.48
PCDHA13-201ENST00000289272 NCKIPSDQ9NZQ3 722 aa18.04■□□□□ 0.48
PCDHA13-201ENST00000289272 RBP1P09455 135 aa18.04■□□□□ 0.48
PCDHA13-201ENST00000289272 SERPINB5P36952 375 aa18.04■□□□□ 0.48
PCDHA13-201ENST00000289272 ALDH1A3P47895 512 aa18.04■□□□□ 0.48
PCDHA13-201ENST00000289272 RXRGP48443 463 aa18.04■□□□□ 0.48
PCDHA13-201ENST00000289272 BNIP1Q12981 228 aa18.04■□□□□ 0.48
PCDHA13-201ENST00000289272 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.04■□□□□ 0.48
PCDHA13-201ENST00000289272 OR6P1Q8NGX9 317 aa18.04■□□□□ 0.48
PCDHA13-201ENST00000289272 OLFM1Q99784 485 aa18.04■□□□□ 0.48
PCDHA13-201ENST00000289272 COQ7Q99807 217 aa18.04■□□□□ 0.48
PCDHA13-201ENST00000289272 FBXO28Q9NVF7 368 aa18.04■□□□□ 0.48
PCDHA13-201ENST00000289272 DKK3Q9UBP4 350 aa18.04■□□□□ 0.48
PCDHA13-201ENST00000289272 AGAP1Q9UPQ3 857 aa18.04■□□□□ 0.48
PCDHA13-201ENST00000289272 UMODL1Q5DID0 1318 aa18.03■□□□□ 0.48
PCDHA13-201ENST00000289272 H3BNX3 289 aa18.03■□□□□ 0.48
PCDHA13-201ENST00000289272 TGM2P21980 687 aa18.03■□□□□ 0.48
PCDHA13-201ENST00000289272 OTUD4Q01804 1114 aaKnown RBP18.03■□□□□ 0.48
PCDHA13-201ENST00000289272 CUL2Q13617 745 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms