RNA–Protein interactions for RNA: ENST00000285238.12

ABCC3-201, Transcript of ATP binding cassette subfamily C member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCC3, Length 5,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-201ENST00000285238 OCMP0CE72 109 aaPredicted RBP12.98□□□□□ -0.33
ABCC3-201ENST00000285238 ACADSP16219 412 aa12.98□□□□□ -0.33
ABCC3-201ENST00000285238 ELK3P41970 407 aa12.98□□□□□ -0.33
ABCC3-201ENST00000285238 SKIV2LQ15477 1246 aaKnown RBP12.98□□□□□ -0.33
ABCC3-201ENST00000285238 CBWD6Q4V339 395 aa12.98□□□□□ -0.33
ABCC3-201ENST00000285238 CBWD3Q5JTY5 395 aa12.98□□□□□ -0.33
ABCC3-201ENST00000285238 CBWD5Q5RIA9 395 aa12.98□□□□□ -0.33
ABCC3-201ENST00000285238 SH3RF1Q7Z6J0 888 aa12.98□□□□□ -0.33
ABCC3-201ENST00000285238 ZNF333Q96JL9 665 aa12.98□□□□□ -0.33
ABCC3-201ENST00000285238 MTIF3Q9H2K0 278 aaKnown RBP12.98□□□□□ -0.33
ABCC3-201ENST00000285238 ITGA11Q9UKX5 1188 aa12.98□□□□□ -0.33
ABCC3-201ENST00000285238 ACOT9Q9Y305 439 aa12.98□□□□□ -0.33
ABCC3-201ENST00000285238 CASTOR2A6NHX0 329 aa12.98□□□□□ -0.33
ABCC3-201ENST00000285238 CNTFP26441 200 aa12.98□□□□□ -0.33
ABCC3-201ENST00000285238 SERPINB3P29508 390 aa12.98□□□□□ -0.33
ABCC3-201ENST00000285238 LHX1P48742 406 aa12.98□□□□□ -0.33
ABCC3-201ENST00000285238 MEA1Q16626 185 aa12.98□□□□□ -0.33
ABCC3-201ENST00000285238 PRPF18Q99633 342 aaKnown RBP12.98□□□□□ -0.33
ABCC3-201ENST00000285238 DDX28Q9NUL7 540 aaKnown RBP12.98□□□□□ -0.33
ABCC3-201ENST00000285238 PCDHA3Q9Y5H8 950 aa12.98□□□□□ -0.33
ABCC3-201ENST00000285238 TIMM13Q9Y5L4 95 aaPredicted RBP12.98□□□□□ -0.33
ABCC3-201ENST00000285238 DEPDC5O75140 1603 aa12.98□□□□□ -0.33
ABCC3-201ENST00000285238 DSG1Q02413 1049 aa12.97□□□□□ -0.33
ABCC3-201ENST00000285238 GALNTL6Q49A17 601 aa12.97□□□□□ -0.33
ABCC3-201ENST00000285238 CTXN3Q4LDR2 81 aa12.97□□□□□ -0.33
ABCC3-201ENST00000285238 MFSD7Q6UXD7 560 aa12.97□□□□□ -0.33
ABCC3-201ENST00000285238 P3H2Q8IVL5 708 aa12.97□□□□□ -0.33
ABCC3-201ENST00000285238 EXOSC4Q9NPD3 245 aaKnown RBP12.97□□□□□ -0.33
ABCC3-201ENST00000285238 SLC12A8A0AV02 714 aa12.97□□□□□ -0.33
ABCC3-201ENST00000285238 DNALI1O14645 258 aaPredicted RBP12.97□□□□□ -0.33
ABCC3-201ENST00000285238 TM9SF1O15321 606 aa12.97□□□□□ -0.33
ABCC3-201ENST00000285238 HNRNPRO43390 633 aaKnown RBP12.97□□□□□ -0.33
ABCC3-201ENST00000285238 KIF1CO43896 1103 aaKnown RBP12.97□□□□□ -0.33
ABCC3-201ENST00000285238 LRG1P02750 347 aa12.97□□□□□ -0.33
ABCC3-201ENST00000285238 CALB2P22676 271 aa12.97□□□□□ -0.33
ABCC3-201ENST00000285238 MGAT5Q09328 741 aa12.97□□□□□ -0.33
ABCC3-201ENST00000285238 ERMARDQ5T6L9 678 aa12.97□□□□□ -0.33
ABCC3-201ENST00000285238 APOBEC3HQ6NTF7 200 aaKnown RBP12.97□□□□□ -0.33
ABCC3-201ENST00000285238 ZFPM1Q8IX07 1006 aa12.97□□□□□ -0.33
ABCC3-201ENST00000285238 PGBD3Q8N328 593 aa12.97□□□□□ -0.33
ABCC3-201ENST00000285238 TRAPPC12Q8WVT3 735 aa12.97□□□□□ -0.33
ABCC3-201ENST00000285238 HES6Q96HZ4 224 aa12.97□□□□□ -0.33
ABCC3-201ENST00000285238 NT5MQ9NPB1 228 aa12.97□□□□□ -0.33
ABCC3-201ENST00000285238 NMRK2Q9NPI5 230 aa12.97□□□□□ -0.33
ABCC3-201ENST00000285238 PNMA8BQ9ULN7 279 aaPredicted RBP12.97□□□□□ -0.33
ABCC3-201ENST00000285238 SMIM22K7EJ46 135 aa12.97□□□□□ -0.33
ABCC3-201ENST00000285238 TGFB3P10600 412 aa12.97□□□□□ -0.33
ABCC3-201ENST00000285238 PSMA4P25789 261 aaKnown RBP12.97□□□□□ -0.33
ABCC3-201ENST00000285238 CDH8P55286 799 aa12.97□□□□□ -0.33
ABCC3-201ENST00000285238 OXCT1P55809 520 aa12.97□□□□□ -0.33
ABCC3-201ENST00000285238 CSHL1Q14406 222 aa12.97□□□□□ -0.33
ABCC3-201ENST00000285238 POLD3Q15054 466 aaPredicted RBP12.97□□□□□ -0.33
ABCC3-201ENST00000285238 TTC33Q6PID6 262 aaPredicted RBP12.97□□□□□ -0.33
ABCC3-201ENST00000285238 VGLL2Q8N8G2 317 aa12.97□□□□□ -0.33
ABCC3-201ENST00000285238 ZBTB45Q96K62 511 aaPredicted RBP12.97□□□□□ -0.33
ABCC3-201ENST00000285238 EIF3LQ9Y262 564 aaKnown RBP12.97□□□□□ -0.33
ABCC3-201ENST00000285238 PECAM1P16284 738 aaPredicted RBP12.97□□□□□ -0.33
ABCC3-201ENST00000285238 ZNF844Q08AG5 666 aa12.97□□□□□ -0.33
ABCC3-201ENST00000285238 BNC2Q6ZN30 1099 aaPredicted RBP12.97□□□□□ -0.33
ABCC3-201ENST00000285238 CREG2Q8IUH2 290 aa12.97□□□□□ -0.33
ABCC3-201ENST00000285238 STX19Q8N4C7 294 aa12.97□□□□□ -0.33
ABCC3-201ENST00000285238 GLIS3Q8NEA6 775 aa12.97□□□□□ -0.33
ABCC3-201ENST00000285238 TNIP2Q8NFZ5 429 aa12.97□□□□□ -0.33
ABCC3-201ENST00000285238 EDEM1Q92611 657 aa12.97□□□□□ -0.33
ABCC3-201ENST00000285238 PPP2R3CQ969Q6 453 aa12.97□□□□□ -0.33
ABCC3-201ENST00000285238 CELF6Q96J87 481 aaKnown RBP12.97□□□□□ -0.33
ABCC3-201ENST00000285238 PLEKHA8Q96JA3 519 aa12.97□□□□□ -0.33
ABCC3-201ENST00000285238 MTMR9Q96QG7 549 aa12.97□□□□□ -0.33
ABCC3-201ENST00000285238 SH3GL3Q99963 347 aa12.97□□□□□ -0.33
ABCC3-201ENST00000285238 SCN3BQ9NY72 215 aa12.97□□□□□ -0.33
ABCC3-201ENST00000285238 VANGL2Q9ULK5 521 aa12.97□□□□□ -0.33
ABCC3-201ENST00000285238 LOC102724159A0A0B4J2E5 919 aa12.97□□□□□ -0.33
ABCC3-201ENST00000285238 TISP43B9A030 160 aa12.97□□□□□ -0.33
ABCC3-201ENST00000285238 ARHGEF9O43307 516 aa12.97□□□□□ -0.33
ABCC3-201ENST00000285238 DAB1O75553 588 aa12.97□□□□□ -0.33
ABCC3-201ENST00000285238 ACAT1P24752 427 aaKnown RBP12.97□□□□□ -0.33
ABCC3-201ENST00000285238 UBE3AQ05086 875 aa12.97□□□□□ -0.33
ABCC3-201ENST00000285238 SREBF2Q12772 1141 aa12.97□□□□□ -0.33
ABCC3-201ENST00000285238 PWP2Q15269 919 aaKnown RBP12.97□□□□□ -0.33
ABCC3-201ENST00000285238 AARS2Q5JTZ9 985 aaKnown RBP12.97□□□□□ -0.33
ABCC3-201ENST00000285238 ACBD5Q5T8D3 534 aaPredicted RBP12.97□□□□□ -0.33
ABCC3-201ENST00000285238 GPAMQ9HCL2 828 aa12.97□□□□□ -0.33
ABCC3-201ENST00000285238 KCNQ5Q9NR82 932 aa12.97□□□□□ -0.33
ABCC3-201ENST00000285238 DDX43Q9NXZ2 648 aaKnown RBP12.97□□□□□ -0.33
ABCC3-201ENST00000285238 WTIPA6NIX2 430 aaPredicted RBP12.96□□□□□ -0.33
ABCC3-201ENST00000285238 GJB6O95452 261 aa12.96□□□□□ -0.33
ABCC3-201ENST00000285238 MBL2P11226 248 aaPredicted RBP12.96□□□□□ -0.33
ABCC3-201ENST00000285238 GRK2P25098 689 aa12.96□□□□□ -0.33
ABCC3-201ENST00000285238 SSTR1P30872 391 aa12.96□□□□□ -0.33
ABCC3-201ENST00000285238 CYLC2Q14093 348 aaPredicted RBP12.96□□□□□ -0.33
ABCC3-201ENST00000285238 ZNF268Q14587 947 aaPredicted RBP12.96□□□□□ -0.33
ABCC3-201ENST00000285238 NIPA1Q7RTP0 329 aa12.96□□□□□ -0.33
ABCC3-201ENST00000285238 USP13Q92995 863 aaPredicted RBP12.96□□□□□ -0.33
ABCC3-201ENST00000285238 GFM2Q969S9 779 aaKnown RBP12.96□□□□□ -0.33
ABCC3-201ENST00000285238 TMEM106CQ9BVX2 250 aa12.96□□□□□ -0.33
ABCC3-201ENST00000285238 DDX20Q9UHI6 824 aaKnown RBP12.96□□□□□ -0.33
ABCC3-201ENST00000285238 TAGLN3Q9UI15 199 aa12.96□□□□□ -0.33
ABCC3-201ENST00000285238 SOX13Q9UN79 622 aa12.96□□□□□ -0.33
ABCC3-201ENST00000285238 DRG1Q9Y295 367 aaKnown RBP12.96□□□□□ -0.33
ABCC3-201ENST00000285238 CES2O00748 559 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms