RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 BACE1P56817 501 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 CDC16Q13042 620 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 CAPSQ13938 189 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 HNRNPDQ14103 355 aaKnown RBP10.78□□□□□ -0.68
SKA1-201ENST00000285116 DPYSL3Q14195 570 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 PTPN20Q4JDL3 420 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 FAM47CQ5HY64 1035 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 NAT14Q8WUY8 206 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 LZICQ8WZA0 190 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 TMEM143Q96AN5 459 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 LRRC39Q96DD0 335 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 MRRFQ96E11 262 aaKnown RBP10.78□□□□□ -0.68
SKA1-201ENST00000285116 MCRS1Q96EZ8 462 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 OXNAD1Q96HP4 312 aaPredicted RBP10.78□□□□□ -0.68
SKA1-201ENST00000285116 GPAMQ9HCL2 828 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 DNAAF2Q9NVR5 837 aaKnown RBP10.78□□□□□ -0.68
SKA1-201ENST00000285116 SLC17A7Q9P2U7 560 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 GMEB1Q9Y692 573 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 LRRIQ4A6NIV6 560 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 FCHO1O14526 889 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 ZSCAN9O15535 394 aaPredicted RBP10.78□□□□□ -0.68
SKA1-201ENST00000285116 PRKCHP24723 683 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 RFC1P35251 1148 aaPredicted RBP10.78□□□□□ -0.68
SKA1-201ENST00000285116 MAGEA8P43361 318 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 MYL6P60660 151 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 ACTR3P61158 418 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 ZNF200P98182 395 aaPredicted RBP10.78□□□□□ -0.68
SKA1-201ENST00000285116 PLCB3Q01970 1234 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 LRRC6Q86X45 466 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 XYLT1Q86Y38 959 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 SCUBE1Q8IWY4 988 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 EXOC8Q8IYI6 725 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 PRR11Q96HE9 360 aaPredicted RBP10.78□□□□□ -0.68
SKA1-201ENST00000285116 SIKE1Q9BRV8 207 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 ACAD9Q9H845 621 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 AS3MTQ9HBK9 375 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 PREBQ9HCU5 417 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 ZDHHC7Q9NXF8 308 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 NDUFA13Q9P0J0 144 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 G3BP2Q9UN86 482 aaKnown RBP10.78□□□□□ -0.68
SKA1-201ENST00000285116 TELO2Q9Y4R8 837 aa10.78□□□□□ -0.68
SKA1-201ENST00000285116 SMIM31A0A1B0GVY4 71 aa10.77□□□□□ -0.69
SKA1-201ENST00000285116 TCRBV9S1A1TA0A576 114 aa10.77□□□□□ -0.69
SKA1-201ENST00000285116 CAPN14A8MX76 684 aa10.77□□□□□ -0.69
SKA1-201ENST00000285116 B2RBV5 119 aa10.77□□□□□ -0.69
SKA1-201ENST00000285116 MCF2LO15068 1137 aa10.77□□□□□ -0.69
SKA1-201ENST00000285116 COQ9O75208 318 aa10.77□□□□□ -0.69
SKA1-201ENST00000285116 IFNB1P01574 187 aa10.77□□□□□ -0.69
SKA1-201ENST00000285116 PIM1P11309 404 aaPredicted RBP10.77□□□□□ -0.69
SKA1-201ENST00000285116 PTK7Q13308 1070 aa10.77□□□□□ -0.69
SKA1-201ENST00000285116 TTLL12Q14166 644 aaPredicted RBP10.77□□□□□ -0.69
SKA1-201ENST00000285116 STXBP5Q5T5C0 1151 aa10.77□□□□□ -0.69
SKA1-201ENST00000285116 TTC39BQ5VTQ0 682 aaPredicted RBP10.77□□□□□ -0.69
SKA1-201ENST00000285116 MAP1SQ66K74 1059 aaPredicted RBP10.77□□□□□ -0.69
SKA1-201ENST00000285116 SNRNP48Q6IEG0 339 aaKnown RBP10.77□□□□□ -0.69
SKA1-201ENST00000285116 RIPOR1Q6ZS17 1223 aa10.77□□□□□ -0.69
SKA1-201ENST00000285116 CAPN12Q6ZSI9 719 aa10.77□□□□□ -0.69
SKA1-201ENST00000285116 ADGRG6Q86SQ4 1221 aa10.77□□□□□ -0.69
SKA1-201ENST00000285116 UNC45BQ8IWX7 931 aa10.77□□□□□ -0.69
SKA1-201ENST00000285116 SLC16A10Q8TF71 515 aa10.77□□□□□ -0.69
SKA1-201ENST00000285116 MTBPQ96DY7 904 aa10.77□□□□□ -0.69
SKA1-201ENST00000285116 ACO2Q99798 780 aaKnown RBP10.77□□□□□ -0.69
SKA1-201ENST00000285116 MYOZ2Q9NPC6 264 aa10.77□□□□□ -0.69
SKA1-201ENST00000285116 ARHGEF4Q9NR80 690 aa10.77□□□□□ -0.69
SKA1-201ENST00000285116 RNASEH1O60930 286 aaKnown RBP10.77□□□□□ -0.69
SKA1-201ENST00000285116 FKBP6O75344 327 aa10.77□□□□□ -0.69
SKA1-201ENST00000285116 BANF1O75531 89 aa10.77□□□□□ -0.69
SKA1-201ENST00000285116 TM7SF2O76062 418 aa10.77□□□□□ -0.69
SKA1-201ENST00000285116 TOMM70O94826 608 aa10.77□□□□□ -0.69
SKA1-201ENST00000285116 TRUB2O95900 331 aaKnown RBP10.77□□□□□ -0.69
SKA1-201ENST00000285116 HOXC6P09630 235 aa10.77□□□□□ -0.69
SKA1-201ENST00000285116 EIF3EP60228 445 aaKnown RBP10.77□□□□□ -0.69
SKA1-201ENST00000285116 GAD2Q05329 585 aa10.77□□□□□ -0.69
SKA1-201ENST00000285116 DNAL1Q4LDG9 190 aa10.77□□□□□ -0.69
SKA1-201ENST00000285116 CFAP157Q5JU67 520 aa10.77□□□□□ -0.69
SKA1-201ENST00000285116 HP1BP3Q5SSJ5 553 aaPredicted RBP10.77□□□□□ -0.69
SKA1-201ENST00000285116 ZFYVE27Q5T4F4 411 aa10.77□□□□□ -0.69
SKA1-201ENST00000285116 TMCO4Q5TGY1 634 aa10.77□□□□□ -0.69
SKA1-201ENST00000285116 DENND1BQ6P3S1 775 aa10.77□□□□□ -0.69
SKA1-201ENST00000285116 SPATA24Q86W54 205 aa10.77□□□□□ -0.69
SKA1-201ENST00000285116 SLC26A11Q86WA9 606 aa10.77□□□□□ -0.69
SKA1-201ENST00000285116 SERAC1Q96JX3 654 aa10.77□□□□□ -0.69
SKA1-201ENST00000285116 TEX13BQ9BXU2 312 aa10.77□□□□□ -0.69
SKA1-201ENST00000285116 VRTNQ9H8Y1 702 aa10.77□□□□□ -0.69
SKA1-201ENST00000285116 NRBP2Q9NSY0 501 aa10.77□□□□□ -0.69
SKA1-201ENST00000285116 GGA3Q9NZ52 723 aa10.77□□□□□ -0.69
SKA1-201ENST00000285116 SIRPGQ9P1W8 387 aa10.77□□□□□ -0.69
SKA1-201ENST00000285116 CIDEBQ9UHD4 219 aa10.77□□□□□ -0.69
SKA1-201ENST00000285116 SORCS3Q9UPU3 1222 aa10.77□□□□□ -0.69
SKA1-201ENST00000285116 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.77□□□□□ -0.69
SKA1-201ENST00000285116 TCRBV7S3A2A0A539 114 aa10.76□□□□□ -0.69
SKA1-201ENST00000285116 C19orf81C9J6K1 198 aa10.76□□□□□ -0.69
SKA1-201ENST00000285116 BIRC5O15392 142 aa10.76□□□□□ -0.69
SKA1-201ENST00000285116 ATP9BO43861 1147 aa10.76□□□□□ -0.69
SKA1-201ENST00000285116 CSDE1O75534 798 aaKnown RBP10.76□□□□□ -0.69
SKA1-201ENST00000285116 ETS2P15036 469 aa10.76□□□□□ -0.69
SKA1-201ENST00000285116 VAV1P15498 845 aa10.76□□□□□ -0.69
SKA1-201ENST00000285116 TFDP2Q14188 446 aa10.76□□□□□ -0.69
SKA1-201ENST00000285116 IER5Q5VY09 327 aa10.76□□□□□ -0.69
SKA1-201ENST00000285116 RFX8Q6ZV50 586 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms