RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 HMGA1P17096 107 aaKnown RBP19.77■□□□□ 0.76
PDLIM3-202ENST00000284770 DESP17661 470 aa19.77■□□□□ 0.76
PDLIM3-202ENST00000284770 TAF10Q12962 218 aa19.77■□□□□ 0.76
PDLIM3-202ENST00000284770 RPS6KA1Q15418 735 aa19.77■□□□□ 0.76
PDLIM3-202ENST00000284770 C15orf59Q2T9L4 293 aaPredicted RBP19.77■□□□□ 0.76
PDLIM3-202ENST00000284770 SLC25A52Q3SY17 297 aa19.77■□□□□ 0.76
PDLIM3-202ENST00000284770 DAB2IPQ5VWQ8 1189 aa19.77■□□□□ 0.76
PDLIM3-202ENST00000284770 SYPL2Q5VXT5 272 aa19.77■□□□□ 0.76
PDLIM3-202ENST00000284770 CC2D1AQ6P1N0 951 aaPredicted RBP19.77■□□□□ 0.76
PDLIM3-202ENST00000284770 RTL10Q7L3V2 364 aa19.77■□□□□ 0.76
PDLIM3-202ENST00000284770 SCD5Q86SK9 330 aa19.77■□□□□ 0.76
PDLIM3-202ENST00000284770 LRRN4CLQ8ND94 238 aa19.77■□□□□ 0.76
PDLIM3-202ENST00000284770 COG1Q8WTW3 980 aa19.77■□□□□ 0.76
PDLIM3-202ENST00000284770 NT5C3BQ969T7 300 aa19.77■□□□□ 0.76
PDLIM3-202ENST00000284770 MYRFLQ96LU7 910 aa19.77■□□□□ 0.76
PDLIM3-202ENST00000284770 CARD6Q9BX69 1037 aa19.77■□□□□ 0.76
PDLIM3-202ENST00000284770 STAP1Q9ULZ2 295 aa19.77■□□□□ 0.76
PDLIM3-202ENST00000284770 MAGED2Q9UNF1 606 aaPredicted RBP19.77■□□□□ 0.76
PDLIM3-202ENST00000284770 A0A1W2PPC1 479 aa19.76■□□□□ 0.75
PDLIM3-202ENST00000284770 A0A1W2PQH9 124 aa19.76■□□□□ 0.75
PDLIM3-202ENST00000284770 MIF4GDA9UHW6 222 aaKnown RBP19.76■□□□□ 0.75
PDLIM3-202ENST00000284770 ZNF185O15231 689 aa19.76■□□□□ 0.75
PDLIM3-202ENST00000284770 PGFP49763 221 aa19.76■□□□□ 0.75
PDLIM3-202ENST00000284770 ATP11AP98196 1134 aa19.76■□□□□ 0.75
PDLIM3-202ENST00000284770 LRIT3Q3SXY7 679 aa19.76■□□□□ 0.75
PDLIM3-202ENST00000284770 SH3PXD2AQ5TCZ1 1133 aa19.76■□□□□ 0.75
PDLIM3-202ENST00000284770 CREG2Q8IUH2 290 aa19.76■□□□□ 0.75
PDLIM3-202ENST00000284770 ARFGAP1Q8N6T3 406 aa19.76■□□□□ 0.75
PDLIM3-202ENST00000284770 EDEM1Q92611 657 aa19.76■□□□□ 0.75
PDLIM3-202ENST00000284770 CENPIQ92674 756 aaPredicted RBP19.76■□□□□ 0.75
PDLIM3-202ENST00000284770 PSMG2Q969U7 264 aa19.76■□□□□ 0.75
PDLIM3-202ENST00000284770 TRMT2BQ96GJ1 504 aaKnown RBP19.76■□□□□ 0.75
PDLIM3-202ENST00000284770 SLITRK1Q96PX8 696 aa19.76■□□□□ 0.75
PDLIM3-202ENST00000284770 PSMB7Q99436 277 aa19.76■□□□□ 0.75
PDLIM3-202ENST00000284770 PLEKHA4Q9H4M7 779 aa19.76■□□□□ 0.75
PDLIM3-202ENST00000284770 NMUR1Q9HB89 426 aa19.76■□□□□ 0.75
PDLIM3-202ENST00000284770 GMIPQ9P107 970 aa19.76■□□□□ 0.75
PDLIM3-202ENST00000284770 ASB3Q9Y575 518 aa19.76■□□□□ 0.75
PDLIM3-202ENST00000284770 PER2O15055 1255 aa19.75■□□□□ 0.75
PDLIM3-202ENST00000284770 LRCH4O75427 683 aa19.75■□□□□ 0.75
PDLIM3-202ENST00000284770 CXCR5P32302 372 aa19.75■□□□□ 0.75
PDLIM3-202ENST00000284770 GTF2F1P35269 517 aaKnown RBP eCLIP19.75■□□□□ 0.75
PDLIM3-202ENST00000284770 PSEN1P49768 467 aa19.75■□□□□ 0.75
PDLIM3-202ENST00000284770 TAF12Q16514 161 aa19.75■□□□□ 0.75
PDLIM3-202ENST00000284770 CDO1Q16878 200 aa19.75■□□□□ 0.75
PDLIM3-202ENST00000284770 BTBD8Q5XKL5 378 aa19.75■□□□□ 0.75
PDLIM3-202ENST00000284770 DNAJB7Q7Z6W7 309 aaPredicted RBP19.75■□□□□ 0.75
PDLIM3-202ENST00000284770 ITIH5Q86UX2 942 aa19.75■□□□□ 0.75
PDLIM3-202ENST00000284770 SLC22A17Q8WUG5 538 aa19.75■□□□□ 0.75
PDLIM3-202ENST00000284770 NPY6RQ99463 290 aa19.75■□□□□ 0.75
PDLIM3-202ENST00000284770 TLR8Q9NR97 1041 aaKnown RBP19.75■□□□□ 0.75
PDLIM3-202ENST00000284770 RRN3Q9NYV6 651 aa19.75■□□□□ 0.75
PDLIM3-202ENST00000284770 CCDC66A2RUB6 948 aa19.75■□□□□ 0.75
PDLIM3-202ENST00000284770 RFXAPO00287 272 aa19.75■□□□□ 0.75
PDLIM3-202ENST00000284770 DDX3YO15523 660 aaKnown RBP19.75■□□□□ 0.75
PDLIM3-202ENST00000284770 LRG1P02750 347 aa19.75■□□□□ 0.75
PDLIM3-202ENST00000284770 TFE3P19532 575 aaPredicted RBP19.75■□□□□ 0.75
PDLIM3-202ENST00000284770 CTNNA1P35221 906 aaKnown RBP19.75■□□□□ 0.75
PDLIM3-202ENST00000284770 PCK1P35558 622 aa19.75■□□□□ 0.75
PDLIM3-202ENST00000284770 ADGRD2Q7Z7M1 963 aa19.75■□□□□ 0.75
PDLIM3-202ENST00000284770 RBM23Q86U06 439 aaKnown RBP19.75■□□□□ 0.75
PDLIM3-202ENST00000284770 UBL4BQ8N7F7 174 aa19.75■□□□□ 0.75
PDLIM3-202ENST00000284770 FAM172AQ8WUF8 416 aa19.75■□□□□ 0.75
PDLIM3-202ENST00000284770 HDAC7Q8WUI4 952 aa19.75■□□□□ 0.75
PDLIM3-202ENST00000284770 OVCA2Q8WZ82 227 aa19.75■□□□□ 0.75
PDLIM3-202ENST00000284770 TBCBQ99426 244 aa19.75■□□□□ 0.75
PDLIM3-202ENST00000284770 NCAPGQ9BPX3 1015 aa19.75■□□□□ 0.75
PDLIM3-202ENST00000284770 MAN1C1Q9NR34 630 aa19.75■□□□□ 0.75
PDLIM3-202ENST00000284770 OSER1Q9NX31 292 aa19.75■□□□□ 0.75
PDLIM3-202ENST00000284770 PCDHA3Q9Y5H8 950 aa19.75■□□□□ 0.75
PDLIM3-202ENST00000284770 PLXNA3P51805 1871 aa19.74■□□□□ 0.75
PDLIM3-202ENST00000284770 GREB1Q4ZG55 1949 aa19.74■□□□□ 0.75
PDLIM3-202ENST00000284770 ZDHHC11BP0C7U3 371 aa19.74■□□□□ 0.75
PDLIM3-202ENST00000284770 EPCAMP16422 314 aa19.74■□□□□ 0.75
PDLIM3-202ENST00000284770 CTNNA2P26232 953 aa19.74■□□□□ 0.75
PDLIM3-202ENST00000284770 SSR1P43307 286 aaKnown RBP19.74■□□□□ 0.75
PDLIM3-202ENST00000284770 SULT1E1P49888 294 aa19.74■□□□□ 0.75
PDLIM3-202ENST00000284770 DNA2P51530 1060 aa19.74■□□□□ 0.75
PDLIM3-202ENST00000284770 TAS2R40P59535 323 aa19.74■□□□□ 0.75
PDLIM3-202ENST00000284770 STRADAQ7RTN6 431 aa19.74■□□□□ 0.75
PDLIM3-202ENST00000284770 BNIPLQ7Z465 357 aa19.74■□□□□ 0.75
PDLIM3-202ENST00000284770 RHOT1Q8IXI2 618 aa19.74■□□□□ 0.75
PDLIM3-202ENST00000284770 MRPL38Q96DV4 380 aaKnown RBP19.74■□□□□ 0.75
PDLIM3-202ENST00000284770 ADAM33Q9BZ11 813 aa19.74■□□□□ 0.75
PDLIM3-202ENST00000284770 ZNF576Q9H609 170 aa19.74■□□□□ 0.75
PDLIM3-202ENST00000284770 TLE6Q9H808 572 aa19.74■□□□□ 0.75
PDLIM3-202ENST00000284770 CLIC5Q9NZA1 410 aa19.74■□□□□ 0.75
PDLIM3-202ENST00000284770 DPP7Q9UHL4 492 aa19.74■□□□□ 0.75
PDLIM3-202ENST00000284770 COL4A4P53420 1690 aaPredicted RBP19.74■□□□□ 0.75
PDLIM3-202ENST00000284770 CES2O00748 559 aa19.73■□□□□ 0.75
PDLIM3-202ENST00000284770 CTIFO43310 598 aaKnown RBP19.73■□□□□ 0.75
PDLIM3-202ENST00000284770 ENDOD1O94919 500 aa19.73■□□□□ 0.75
PDLIM3-202ENST00000284770 TCF4P15884 667 aa19.73■□□□□ 0.75
PDLIM3-202ENST00000284770 MIPP30301 263 aa19.73■□□□□ 0.75
PDLIM3-202ENST00000284770 PEX5P50542 639 aa19.73■□□□□ 0.75
PDLIM3-202ENST00000284770 PPM1LQ5SGD2 360 aa19.73■□□□□ 0.75
PDLIM3-202ENST00000284770 LRRC38Q5VT99 294 aa19.73■□□□□ 0.75
PDLIM3-202ENST00000284770 PDZD8Q8NEN9 1154 aa19.73■□□□□ 0.75
PDLIM3-202ENST00000284770 KRT35Q92764 455 aa19.73■□□□□ 0.75
PDLIM3-202ENST00000284770 CAPZA3Q96KX2 299 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms