RNA–Protein interactions for RNA: ENST00000282074.6

SPC25-201, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC25, Length 1,354 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-201ENST00000282074 MRPL44Q9H9J2 332 aaKnown RBP12.73□□□□□ -0.37
SPC25-201ENST00000282074 PRDM16Q9HAZ2 1276 aa12.73□□□□□ -0.37
SPC25-201ENST00000282074 PDE11AQ9HCR9 933 aa12.73□□□□□ -0.37
SPC25-201ENST00000282074 CD248Q9HCU0 757 aa12.73□□□□□ -0.37
SPC25-201ENST00000282074 TM7SF3Q9NS93 570 aa12.73□□□□□ -0.37
SPC25-201ENST00000282074 SEL1LQ9UBV2 794 aa12.73□□□□□ -0.37
SPC25-201ENST00000282074 SIX4Q9UIU6 781 aa12.73□□□□□ -0.37
SPC25-201ENST00000282074 KIF3AQ9Y496 699 aa12.73□□□□□ -0.37
SPC25-201ENST00000282074 PCDHGB2Q9Y5G2 931 aa12.73□□□□□ -0.37
SPC25-201ENST00000282074 KNTC1P50748 2209 aa12.73□□□□□ -0.37
SPC25-201ENST00000282074 PTPRBP23467 1997 aa12.73□□□□□ -0.37
SPC25-201ENST00000282074 COCHO43405 550 aa12.72□□□□□ -0.37
SPC25-201ENST00000282074 CILPO75339 1184 aa12.72□□□□□ -0.37
SPC25-201ENST00000282074 TNNC2P02585 160 aa12.72□□□□□ -0.37
SPC25-201ENST00000282074 ATXN1LP0C7T5 689 aaKnown RBP12.72□□□□□ -0.37
SPC25-201ENST00000282074 GNL1P36915 607 aaPredicted RBP12.72□□□□□ -0.37
SPC25-201ENST00000282074 IFRD2Q12894 506 aaPredicted RBP12.72□□□□□ -0.37
SPC25-201ENST00000282074 MDH1BQ5I0G3 518 aa12.72□□□□□ -0.37
SPC25-201ENST00000282074 SCARA3Q6AZY7 606 aa12.72□□□□□ -0.37
SPC25-201ENST00000282074 METTL3Q86U44 580 aaKnown RBP12.72□□□□□ -0.37
SPC25-201ENST00000282074 NUP93Q8N1F7 819 aa12.72□□□□□ -0.37
SPC25-201ENST00000282074 LARP4BQ92615 738 aaKnown RBP12.72□□□□□ -0.37
SPC25-201ENST00000282074 FBXO32Q969P5 355 aa12.72□□□□□ -0.37
SPC25-201ENST00000282074 ERLEC1Q96DZ1 483 aa12.72□□□□□ -0.37
SPC25-201ENST00000282074 ACOX2Q99424 681 aa12.72□□□□□ -0.37
SPC25-201ENST00000282074 ELOVL4Q9GZR5 314 aa12.72□□□□□ -0.37
SPC25-201ENST00000282074 DNAJC17Q9NVM6 304 aaKnown RBP12.72□□□□□ -0.37
SPC25-201ENST00000282074 WSB2Q9NYS7 404 aaPredicted RBP12.72□□□□□ -0.37
SPC25-201ENST00000282074 WDR35Q9P2L0 1181 aa12.72□□□□□ -0.37
SPC25-201ENST00000282074 HCN2Q9UL51 889 aa12.72□□□□□ -0.37
SPC25-201ENST00000282074 KNL1Q8NG31 2342 aa12.72□□□□□ -0.37
SPC25-201ENST00000282074 MAST4O15021 2626 aa12.71□□□□□ -0.37
SPC25-201ENST00000282074 GOLGA8IPA6NC78 632 aa12.71□□□□□ -0.37
SPC25-201ENST00000282074 GOLGA8JA6NMD2 632 aa12.71□□□□□ -0.37
SPC25-201ENST00000282074 GOLGA8CPA6NN73 597 aa12.71□□□□□ -0.37
SPC25-201ENST00000282074 E9PAM4 449 aa12.71□□□□□ -0.37
SPC25-201ENST00000282074 K7ELQ4 463 aaPredicted RBP12.71□□□□□ -0.37
SPC25-201ENST00000282074 BCAT2O15382 392 aaPredicted RBP12.71□□□□□ -0.37
SPC25-201ENST00000282074 DKK1O94907 266 aa12.71□□□□□ -0.37
SPC25-201ENST00000282074 FAM163BP0C2L3 166 aa12.71□□□□□ -0.37
SPC25-201ENST00000282074 NCAM1P13591 858 aa12.71□□□□□ -0.37
SPC25-201ENST00000282074 TUBP50607 506 aa12.71□□□□□ -0.37
SPC25-201ENST00000282074 STARD3Q14849 445 aa12.71□□□□□ -0.37
SPC25-201ENST00000282074 SURF1Q15526 300 aa12.71□□□□□ -0.37
SPC25-201ENST00000282074 DUOXA2Q1HG44 320 aa12.71□□□□□ -0.37
SPC25-201ENST00000282074 HLA-BQ31612 363 aa12.71□□□□□ -0.37
SPC25-201ENST00000282074 DBX2Q6ZNG2 339 aa12.71□□□□□ -0.37
SPC25-201ENST00000282074 SFR1Q86XK3 245 aa12.71□□□□□ -0.37
SPC25-201ENST00000282074 BBS7Q8IWZ6 715 aa12.71□□□□□ -0.37
SPC25-201ENST00000282074 SYCP3Q8IZU3 236 aa12.71□□□□□ -0.37
SPC25-201ENST00000282074 ZCCHC9Q8N567 271 aaKnown RBP12.71□□□□□ -0.37
SPC25-201ENST00000282074 LSM14AQ8ND56 463 aaKnown RBP12.71□□□□□ -0.37
SPC25-201ENST00000282074 ENGASEQ8NFI3 743 aa12.71□□□□□ -0.37
SPC25-201ENST00000282074 BAHD1Q8TBE0 780 aaPredicted RBP12.71□□□□□ -0.37
SPC25-201ENST00000282074 NOC3LQ8WTT2 800 aaKnown RBP12.71□□□□□ -0.37
SPC25-201ENST00000282074 TOE1Q96GM8 510 aaKnown RBP12.71□□□□□ -0.37
SPC25-201ENST00000282074 ZFRQ96KR1 1074 aaKnown RBP12.71□□□□□ -0.37
SPC25-201ENST00000282074 STRA6Q9BX79 667 aa12.71□□□□□ -0.37
SPC25-201ENST00000282074 GPR174Q9BXC1 333 aa12.71□□□□□ -0.37
SPC25-201ENST00000282074 NACA2Q9H009 215 aa12.71□□□□□ -0.37
SPC25-201ENST00000282074 IL21RQ9HBE5 538 aa12.71□□□□□ -0.37
SPC25-201ENST00000282074 ITM2CQ9NQX7 267 aa12.71□□□□□ -0.37
SPC25-201ENST00000282074 INTS13Q9NVM9 706 aa12.71□□□□□ -0.37
SPC25-201ENST00000282074 TOR4AQ9NXH8 423 aa12.71□□□□□ -0.37
SPC25-201ENST00000282074 CHORDC1Q9UHD1 332 aaPredicted RBP12.71□□□□□ -0.37
SPC25-201ENST00000282074 CABIN1Q9Y6J0 2220 aa12.71□□□□□ -0.37
SPC25-201ENST00000282074 NEDD8-MDP1E9PL57 170 aa12.7□□□□□ -0.38
SPC25-201ENST00000282074 TRIM24O15164 1050 aa12.7□□□□□ -0.38
SPC25-201ENST00000282074 TNFSF14O43557 240 aa12.7□□□□□ -0.38
SPC25-201ENST00000282074 PPP1R37O75864 691 aa12.7□□□□□ -0.38
SPC25-201ENST00000282074 PRB1P04280 392 aa12.7□□□□□ -0.38
SPC25-201ENST00000282074 PTPN1P18031 435 aaKnown RBP12.7□□□□□ -0.38
SPC25-201ENST00000282074 OXTRP30559 389 aa12.7□□□□□ -0.38
SPC25-201ENST00000282074 LONP1P36776 959 aaKnown RBP12.7□□□□□ -0.38
SPC25-201ENST00000282074 ZNF132P52740 706 aa12.7□□□□□ -0.38
SPC25-201ENST00000282074 CAMK2BQ13554 666 aa12.7□□□□□ -0.38
SPC25-201ENST00000282074 SNX30Q5VWJ9 437 aa12.7□□□□□ -0.38
SPC25-201ENST00000282074 ZNF605Q86T29 641 aa12.7□□□□□ -0.38
SPC25-201ENST00000282074 ZSWIM2Q8NEG5 633 aa12.7□□□□□ -0.38
SPC25-201ENST00000282074 OR6B3Q8NGW1 331 aa12.7□□□□□ -0.38
SPC25-201ENST00000282074 BBS2Q9BXC9 721 aa12.7□□□□□ -0.38
SPC25-201ENST00000282074 SLC6A17Q9H1V8 727 aa12.7□□□□□ -0.38
SPC25-201ENST00000282074 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.7□□□□□ -0.381e-7■■■■■ 115.4
SPC25-201ENST00000282074 FNDC3AQ9Y2H6 1198 aaKnown RBP12.7□□□□□ -0.38
SPC25-201ENST00000282074 RAD54BQ9Y620 910 aa12.7□□□□□ -0.38
SPC25-201ENST00000282074 SHROOM3Q8TF72 1996 aa12.7□□□□□ -0.38
SPC25-201ENST00000282074 METTL12A8MUP2 240 aa12.69□□□□□ -0.38
SPC25-201ENST00000282074 KIAA0391O15091 583 aaKnown RBP12.69□□□□□ -0.38
SPC25-201ENST00000282074 ATXN7O15265 892 aaPredicted RBP12.69□□□□□ -0.38
SPC25-201ENST00000282074 CACNG3O60359 315 aa12.69□□□□□ -0.38
SPC25-201ENST00000282074 TACC1O75410 805 aa12.69□□□□□ -0.38
SPC25-201ENST00000282074 PRPF6O94906 941 aaKnown RBP12.69□□□□□ -0.38
SPC25-201ENST00000282074 GCNT3O95395 438 aa12.69□□□□□ -0.38
SPC25-201ENST00000282074 TYRP14679 529 aa12.69□□□□□ -0.38
SPC25-201ENST00000282074 GAP43P17677 238 aa12.69□□□□□ -0.38
SPC25-201ENST00000282074 DGKGP49619 791 aa12.69□□□□□ -0.38
SPC25-201ENST00000282074 KCNA1Q09470 495 aa12.69□□□□□ -0.38
SPC25-201ENST00000282074 DCAF12L1Q5VU92 463 aa12.69□□□□□ -0.38
SPC25-201ENST00000282074 LRRC69Q6ZNQ3 347 aa12.69□□□□□ -0.38
SPC25-201ENST00000282074 HTR3DQ70Z44 454 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms