RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 TMEM35BQ8NCS4 154 aa6.85□□□□□ -1.31
CD44-204ENST00000279452 MSANTD4Q8NCY6 345 aa6.85□□□□□ -1.31
CD44-204ENST00000279452 SLC20A1Q8WUM9 679 aa6.85□□□□□ -1.31
CD44-204ENST00000279452 SLC35F5Q8WV83 523 aa6.85□□□□□ -1.31
CD44-204ENST00000279452 OSCP1Q8WVF1 389 aa6.85□□□□□ -1.31
CD44-204ENST00000279452 CPLX3Q8WVH0 158 aa6.85□□□□□ -1.31
CD44-204ENST00000279452 ATP2A3Q93084 1043 aa6.85□□□□□ -1.31
CD44-204ENST00000279452 ASIC4Q96FT7 647 aa6.85□□□□□ -1.31
CD44-204ENST00000279452 PPP1R13BQ96KQ4 1090 aa6.85□□□□□ -1.31
CD44-204ENST00000279452 HSFY1Q96LI6 401 aa6.85□□□□□ -1.31
CD44-204ENST00000279452 LRRC3BQ96PB8 259 aa6.85□□□□□ -1.31
CD44-204ENST00000279452 LRFN3Q9BTN0 628 aa6.85□□□□□ -1.31
CD44-204ENST00000279452 NAA15Q9BXJ9 866 aaKnown RBP6.85□□□□□ -1.31
CD44-204ENST00000279452 FOXQ1Q9C009 403 aa6.85□□□□□ -1.31
CD44-204ENST00000279452 CYLDQ9NQC7 956 aa6.85□□□□□ -1.31
CD44-204ENST00000279452 ABCC13Q9NSE7 274 aa6.85□□□□□ -1.31
CD44-204ENST00000279452 OLA1Q9NTK5 396 aaKnown RBP6.85□□□□□ -1.31
CD44-204ENST00000279452 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.85□□□□□ -1.31
CD44-204ENST00000279452 IL37Q9NZH6 218 aa6.85□□□□□ -1.31
CD44-204ENST00000279452 MARCH2Q9P0N8 246 aa6.85□□□□□ -1.31
CD44-204ENST00000279452 WNT16Q9UBV4 365 aa6.85□□□□□ -1.31
CD44-204ENST00000279452 PCDHGC3Q9UN70 934 aa6.85□□□□□ -1.31
CD44-204ENST00000279452 MRPS17Q9Y2R5 130 aaKnown RBP6.85□□□□□ -1.31
CD44-204ENST00000279452 USP3Q9Y6I4 520 aa6.85□□□□□ -1.31
CD44-204ENST00000279452 REV3LO60673 3130 aa6.84□□□□□ -1.31
CD44-204ENST00000279452 MYO16Q9Y6X6 1858 aa6.84□□□□□ -1.31
CD44-204ENST00000279452 SYNJ2BP-COX16A0A087WUM0 186 aa6.84□□□□□ -1.31
CD44-204ENST00000279452 A0A1W2PQC6 194 aa6.84□□□□□ -1.31
CD44-204ENST00000279452 LRRC53A6NM62 1247 aa6.84□□□□□ -1.31
CD44-204ENST00000279452 SPECC1L-ADORA2AF8WAN1 911 aa6.84□□□□□ -1.31
CD44-204ENST00000279452 GOLGA8SH3BPF8 625 aa6.84□□□□□ -1.31
CD44-204ENST00000279452 SLC9A3R1O14745 358 aaPredicted RBP6.84□□□□□ -1.31
CD44-204ENST00000279452 MSI1O43347 362 aaKnown RBP6.84□□□□□ -1.31
CD44-204ENST00000279452 GPR37L1O60883 481 aa6.84□□□□□ -1.31
CD44-204ENST00000279452 GRAP2O75791 330 aa6.84□□□□□ -1.31
CD44-204ENST00000279452 NFATC1O95644 943 aa6.84□□□□□ -1.31
CD44-204ENST00000279452 OLFM2O95897 454 aa6.84□□□□□ -1.31
CD44-204ENST00000279452 LTFP02788 710 aa6.84□□□□□ -1.31
CD44-204ENST00000279452 ERBB2P04626 1255 aa6.84□□□□□ -1.31
CD44-204ENST00000279452 NCAM1P13591 858 aa6.84□□□□□ -1.31
CD44-204ENST00000279452 FERP16591 822 aa6.84□□□□□ -1.31
CD44-204ENST00000279452 JAM2P57087 298 aa6.84□□□□□ -1.31
CD44-204ENST00000279452 PRKCQQ04759 706 aa6.84□□□□□ -1.31
CD44-204ENST00000279452 NR1H3Q13133 447 aa6.84□□□□□ -1.31
CD44-204ENST00000279452 RUNX3Q13761 415 aa6.84□□□□□ -1.31
CD44-204ENST00000279452 MEA1Q16626 185 aa6.84□□□□□ -1.31
CD44-204ENST00000279452 ANO4Q32M45 955 aa6.84□□□□□ -1.31
CD44-204ENST00000279452 TDRD12Q587J7 1177 aaKnown RBP6.84□□□□□ -1.31
CD44-204ENST00000279452 IER5LQ5T953 404 aa6.84□□□□□ -1.31
CD44-204ENST00000279452 FAM102AQ5T9C2 384 aaPredicted RBP6.84□□□□□ -1.31
CD44-204ENST00000279452 SFMBT2Q5VUG0 894 aa6.84□□□□□ -1.31
CD44-204ENST00000279452 SNX30Q5VWJ9 437 aa6.84□□□□□ -1.31
CD44-204ENST00000279452 BSPRYQ5W0U4 402 aa6.84□□□□□ -1.31
CD44-204ENST00000279452 DPY19L2P1Q6NXN4 242 aa6.84□□□□□ -1.31
CD44-204ENST00000279452 ZNF852Q6ZMS4 543 aa6.84□□□□□ -1.31
CD44-204ENST00000279452 TOGARAM2Q6ZUX3 1019 aa6.84□□□□□ -1.31
CD44-204ENST00000279452 FAM183BPQ6ZVS7 135 aa6.84□□□□□ -1.31
CD44-204ENST00000279452 ERICH1Q86X53 443 aa6.84□□□□□ -1.31
CD44-204ENST00000279452 FMNL3Q8IVF7 1028 aa6.84□□□□□ -1.31
CD44-204ENST00000279452 ZNF397Q8NF99 534 aaPredicted RBP6.84□□□□□ -1.31
CD44-204ENST00000279452 RIN3Q8TB24 985 aa6.84□□□□□ -1.31
CD44-204ENST00000279452 EPS8L1Q8TE68 723 aa6.84□□□□□ -1.31
CD44-204ENST00000279452 CPA5Q8WXQ8 436 aa6.84□□□□□ -1.31
CD44-204ENST00000279452 IRGQQ8WZA9 623 aa6.84□□□□□ -1.31
CD44-204ENST00000279452 FAM3CQ92520 227 aa6.84□□□□□ -1.31
CD44-204ENST00000279452 BHMTQ93088 406 aa6.84□□□□□ -1.31
CD44-204ENST00000279452 CPXM1Q96SM3 734 aa6.84□□□□□ -1.31
CD44-204ENST00000279452 TRIM62Q9BVG3 475 aa6.84□□□□□ -1.31
CD44-204ENST00000279452 XPO4Q9C0E2 1151 aaKnown RBP6.84□□□□□ -1.31
CD44-204ENST00000279452 LHX5Q9H2C1 402 aa6.84□□□□□ -1.31
CD44-204ENST00000279452 FAM204AQ9H8W3 233 aa6.84□□□□□ -1.31
CD44-204ENST00000279452 C11orf16Q9NQ32 467 aa6.84□□□□□ -1.31
CD44-204ENST00000279452 CLIC5Q9NZA1 410 aa6.84□□□□□ -1.31
CD44-204ENST00000279452 COX16Q9P0S2 106 aa6.84□□□□□ -1.31
CD44-204ENST00000279452 TBC1D14Q9P2M4 693 aa6.84□□□□□ -1.31
CD44-204ENST00000279452 TJP2Q9UDY2 1190 aa6.84□□□□□ -1.31
CD44-204ENST00000279452 SFMBT1Q9UHJ3 866 aa6.84□□□□□ -1.31
CD44-204ENST00000279452 CYTH4Q9UIA0 394 aa6.84□□□□□ -1.31
CD44-204ENST00000279452 KANSL1LA0AUZ9 987 aa6.83□□□□□ -1.32
CD44-204ENST00000279452 E2F8A0AVK6 867 aa6.83□□□□□ -1.32
CD44-204ENST00000279452 FAM170BA6NMN3 283 aa6.83□□□□□ -1.32
CD44-204ENST00000279452 TMCO5BA8MYB1 307 aa6.83□□□□□ -1.32
CD44-204ENST00000279452 NEDD8-MDP1E9PL57 170 aa6.83□□□□□ -1.32
CD44-204ENST00000279452 MAN2B1O00754 1011 aa6.83□□□□□ -1.32
CD44-204ENST00000279452 NCAM2O15394 837 aa6.83□□□□□ -1.32
CD44-204ENST00000279452 PAPSS1O43252 624 aaPredicted RBP6.83□□□□□ -1.32
CD44-204ENST00000279452 LSM8O95777 96 aaKnown RBP6.83□□□□□ -1.32
CD44-204ENST00000279452 MOCS2O96007 188 aaPredicted RBP6.83□□□□□ -1.32
CD44-204ENST00000279452 ADH1CP00326 375 aa6.83□□□□□ -1.32
CD44-204ENST00000279452 DCNP07585 359 aaKnown RBP6.83□□□□□ -1.32
CD44-204ENST00000279452 TPM1P09493 284 aa6.83□□□□□ -1.32
CD44-204ENST00000279452 CORO1AP31146 461 aaKnown RBP6.83□□□□□ -1.32
CD44-204ENST00000279452 CTHP32929 405 aa6.83□□□□□ -1.32
CD44-204ENST00000279452 NSFP46459 744 aaKnown RBP6.83□□□□□ -1.32
CD44-204ENST00000279452 HARS2P49590 506 aaKnown RBP6.83□□□□□ -1.32
CD44-204ENST00000279452 VCPP55072 806 aaKnown RBP6.83□□□□□ -1.32
CD44-204ENST00000279452 ZNF445P59923 1031 aa6.83□□□□□ -1.32
CD44-204ENST00000279452 RNASE9P60153 205 aaKnown RBP6.83□□□□□ -1.32
CD44-204ENST00000279452 COG7P83436 770 aa6.83□□□□□ -1.32
CD44-204ENST00000279452 ZXDBP98169 803 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms