RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 APOL1O14791 398 aa18.69■□□□□ 0.58
CAPN1-201ENST00000279247 GPR182O15218 404 aa18.69■□□□□ 0.58
CAPN1-201ENST00000279247 AP1G2O75843 785 aa18.69■□□□□ 0.58
CAPN1-201ENST00000279247 NPR3P17342 541 aa18.69■□□□□ 0.58
CAPN1-201ENST00000279247 RBL1P28749 1068 aa18.69■□□□□ 0.58
CAPN1-201ENST00000279247 SSTR1P30872 391 aa18.69■□□□□ 0.58
CAPN1-201ENST00000279247 GBE1Q04446 702 aa18.69■□□□□ 0.58
CAPN1-201ENST00000279247 HIF1AQ16665 826 aa18.69■□□□□ 0.58
CAPN1-201ENST00000279247 SYPL2Q5VXT5 272 aa18.69■□□□□ 0.58
CAPN1-201ENST00000279247 EXOC3L1Q86VI1 746 aa18.69■□□□□ 0.58
CAPN1-201ENST00000279247 NLRP14Q86W24 1093 aa18.69■□□□□ 0.58
CAPN1-201ENST00000279247 CCHCR1Q8TD31 782 aa18.69■□□□□ 0.58
CAPN1-201ENST00000279247 SYT15Q9BQS2 421 aa18.69■□□□□ 0.58
CAPN1-201ENST00000279247 TMEM30AQ9NV96 361 aa18.69■□□□□ 0.58
CAPN1-201ENST00000279247 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.69■□□□□ 0.58
CAPN1-201ENST00000279247 SRRDQ9UH36 339 aa18.69■□□□□ 0.58
CAPN1-201ENST00000279247 TMEM63AO94886 807 aa18.68■□□□□ 0.58
CAPN1-201ENST00000279247 TKTL1P51854 596 aa18.68■□□□□ 0.58
CAPN1-201ENST00000279247 SNX16P57768 344 aa18.68■□□□□ 0.58
CAPN1-201ENST00000279247 TFDP2Q14188 446 aa18.68■□□□□ 0.58
CAPN1-201ENST00000279247 TIGD5Q53EQ6 642 aa18.68■□□□□ 0.58
CAPN1-201ENST00000279247 FNBP1LQ5T0N5 605 aa18.68■□□□□ 0.58
CAPN1-201ENST00000279247 PQLC3Q8N755 202 aa18.68■□□□□ 0.58
CAPN1-201ENST00000279247 SH3TC2Q8TF17 1288 aa18.68■□□□□ 0.58
CAPN1-201ENST00000279247 PRCCQ92733 491 aaPredicted RBP18.68■□□□□ 0.58
CAPN1-201ENST00000279247 PCED1BQ96HM7 432 aa18.68■□□□□ 0.58
CAPN1-201ENST00000279247 DUSP16Q9BY84 665 aa18.68■□□□□ 0.58
CAPN1-201ENST00000279247 TSPYL1Q9H0U9 437 aa18.68■□□□□ 0.58
CAPN1-201ENST00000279247 CREB3O43889 395 aa18.68■□□□□ 0.58
CAPN1-201ENST00000279247 AVILO75366 819 aa18.68■□□□□ 0.58
CAPN1-201ENST00000279247 AMPD1P23109 780 aa18.68■□□□□ 0.58
CAPN1-201ENST00000279247 CYP2F1P24903 491 aa18.68■□□□□ 0.58
CAPN1-201ENST00000279247 ITGA7Q13683 1181 aa18.68■□□□□ 0.58
CAPN1-201ENST00000279247 ERMARDQ5T6L9 678 aa18.68■□□□□ 0.58
CAPN1-201ENST00000279247 CLEC20AQ6ZU45 233 aa18.68■□□□□ 0.58
CAPN1-201ENST00000279247 SLC26A9Q7LBE3 791 aa18.68■□□□□ 0.58
CAPN1-201ENST00000279247 GPRIN1Q7Z2K8 1008 aa18.68■□□□□ 0.58
CAPN1-201ENST00000279247 CCDC110Q8TBZ0 833 aa18.68■□□□□ 0.58
CAPN1-201ENST00000279247 TRPV6Q9H1D0 765 aa18.68■□□□□ 0.58
CAPN1-201ENST00000279247 XPO7Q9UIA9 1087 aaKnown RBP18.68■□□□□ 0.58
CAPN1-201ENST00000279247 EBAG9O00559 213 aa18.68■□□□□ 0.58
CAPN1-201ENST00000279247 CAPN9O14815 690 aa18.68■□□□□ 0.58
CAPN1-201ENST00000279247 TOP6BLQ8N6T0 577 aa18.68■□□□□ 0.58
CAPN1-201ENST00000279247 MYCBPAPQ8TBZ2 947 aa18.68■□□□□ 0.58
CAPN1-201ENST00000279247 DYDC1Q8WWB3 177 aa18.68■□□□□ 0.58
CAPN1-201ENST00000279247 PRMT1Q99873 361 aaKnown RBP18.68■□□□□ 0.58
CAPN1-201ENST00000279247 CEP41Q9BYV8 373 aa18.68■□□□□ 0.58
CAPN1-201ENST00000279247 FAM129AQ9BZQ8 928 aa18.68■□□□□ 0.58
CAPN1-201ENST00000279247 INTS9Q9NV88 658 aaKnown RBP18.68■□□□□ 0.58
CAPN1-201ENST00000279247 SLC38A7Q9NVC3 462 aa18.68■□□□□ 0.58
CAPN1-201ENST00000279247 ETNK2Q9NVF9 386 aa18.68■□□□□ 0.58
CAPN1-201ENST00000279247 NAALADL1Q9UQQ1 740 aa18.68■□□□□ 0.58
CAPN1-201ENST00000279247 TTC3P53804 2025 aa18.67■□□□□ 0.58
CAPN1-201ENST00000279247 M0QYT0 321 aa18.67■□□□□ 0.58
CAPN1-201ENST00000279247 ZBED1O96006 694 aa18.67■□□□□ 0.58
CAPN1-201ENST00000279247 AGTP01019 485 aa18.67■□□□□ 0.58
CAPN1-201ENST00000279247 ITGB1P05556 798 aa18.67■□□□□ 0.58
CAPN1-201ENST00000279247 USP17L7P0C7H9 530 aa18.67■□□□□ 0.58
CAPN1-201ENST00000279247 FAM200BP0CF97 657 aa18.67■□□□□ 0.58
CAPN1-201ENST00000279247 GOT1P17174 413 aa18.67■□□□□ 0.58
CAPN1-201ENST00000279247 LRPAP1P30533 357 aa18.67■□□□□ 0.58
CAPN1-201ENST00000279247 MORF4L2Q15014 288 aa18.67■□□□□ 0.58
CAPN1-201ENST00000279247 EFTUD2Q15029 972 aaKnown RBP eCLIP18.67■□□□□ 0.582e-6■■■■■ 29.3
CAPN1-201ENST00000279247 CENPUQ71F23 418 aa18.67■□□□□ 0.58
CAPN1-201ENST00000279247 GDAP1Q8TB36 358 aa18.67■□□□□ 0.58
CAPN1-201ENST00000279247 EDEM1Q92611 657 aa18.67■□□□□ 0.58
CAPN1-201ENST00000279247 ULBP1Q9BZM6 244 aa18.67■□□□□ 0.58
CAPN1-201ENST00000279247 RAB6BQ9NRW1 208 aa18.67■□□□□ 0.58
CAPN1-201ENST00000279247 NRP1O14786 923 aa18.67■□□□□ 0.58
CAPN1-201ENST00000279247 WARSP23381 471 aaKnown RBP18.67■□□□□ 0.58
CAPN1-201ENST00000279247 LPIN1Q14693 890 aa18.67■□□□□ 0.58
CAPN1-201ENST00000279247 NOMO1Q15155 1222 aa18.67■□□□□ 0.58
CAPN1-201ENST00000279247 ZNF473Q8WTR7 871 aaKnown RBP18.67■□□□□ 0.58
CAPN1-201ENST00000279247 FAF2Q96CS3 445 aa18.67■□□□□ 0.58
CAPN1-201ENST00000279247 PAIP2Q9BPZ3 127 aaKnown RBP18.67■□□□□ 0.58
CAPN1-201ENST00000279247 CHMP2BQ9UQN3 213 aa18.67■□□□□ 0.58
CAPN1-201ENST00000279247 EFR3BQ9Y2G0 817 aa18.67■□□□□ 0.58
CAPN1-201ENST00000279247 PDCD11Q14690 1871 aaKnown RBP18.67■□□□□ 0.58
CAPN1-201ENST00000279247 XPO1O14980 1071 aaKnown RBP18.66■□□□□ 0.58
CAPN1-201ENST00000279247 TAZQ16635 292 aa18.66■□□□□ 0.58
CAPN1-201ENST00000279247 QPCTQ16769 361 aa18.66■□□□□ 0.58
CAPN1-201ENST00000279247 PPIL6Q8IXY8 311 aa18.66■□□□□ 0.58
CAPN1-201ENST00000279247 PYROXD1Q8WU10 500 aa18.66■□□□□ 0.58
CAPN1-201ENST00000279247 HNRNPABQ99729 332 aaKnown RBP18.66■□□□□ 0.58
CAPN1-201ENST00000279247 SLC7A14Q8TBB6 771 aa18.66■□□□□ 0.58
CAPN1-201ENST00000279247 STK32AQ8WU08 396 aa18.66■□□□□ 0.58
CAPN1-201ENST00000279247 KCTD15Q96SI1 283 aaPredicted RBP18.66■□□□□ 0.58
CAPN1-201ENST00000279247 TMEM209Q96SK2 561 aa18.66■□□□□ 0.58
CAPN1-201ENST00000279247 CCDC77Q9BR77 488 aa18.66■□□□□ 0.58
CAPN1-201ENST00000279247 KIF9Q9HAQ2 790 aa18.66■□□□□ 0.58
CAPN1-201ENST00000279247 GMNCA6NCL1 334 aa18.66■□□□□ 0.58
CAPN1-201ENST00000279247 DPYSL4O14531 572 aa18.66■□□□□ 0.58
CAPN1-201ENST00000279247 YWHAZP63104 245 aaKnown RBP18.66■□□□□ 0.58
CAPN1-201ENST00000279247 CPLX4Q7Z7G2 160 aa18.66■□□□□ 0.58
CAPN1-201ENST00000279247 STKLD1Q8NE28 680 aa18.66■□□□□ 0.58
CAPN1-201ENST00000279247 FAM124BQ9H5Z6 455 aaPredicted RBP18.66■□□□□ 0.58
CAPN1-201ENST00000279247 NRDE2Q9H7Z3 1164 aa18.66■□□□□ 0.58
CAPN1-201ENST00000279247 TMEM120BA0PK00 339 aa18.65■□□□□ 0.58
CAPN1-201ENST00000279247 SPAG7O75391 227 aa18.65■□□□□ 0.58
CAPN1-201ENST00000279247 APRTP07741 180 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms