RNA–Protein interactions for RNA: ENST00000276585.8

MRPS28-201, Transcript of mitochondrial ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS28, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-201ENST00000276585 NTRK1P04629 796 aa13.08□□□□□ -0.32
MRPS28-201ENST00000276585 WEE1P30291 646 aa13.08□□□□□ -0.32
MRPS28-201ENST00000276585 MAGEA11P43364 429 aa13.08□□□□□ -0.32
MRPS28-201ENST00000276585 NLRP12P59046 1061 aa13.08□□□□□ -0.32
MRPS28-201ENST00000276585 MCCD1P59942 119 aaPredicted RBP13.08□□□□□ -0.32
MRPS28-201ENST00000276585 BYSLQ13895 437 aaKnown RBP13.08□□□□□ -0.32
MRPS28-201ENST00000276585 VEPH1Q14D04 833 aa13.08□□□□□ -0.32
MRPS28-201ENST00000276585 DDR2Q16832 855 aa13.08□□□□□ -0.32
MRPS28-201ENST00000276585 ZACNQ401N2 412 aa13.08□□□□□ -0.32
MRPS28-201ENST00000276585 SPDYCQ5MJ68 293 aa13.08□□□□□ -0.32
MRPS28-201ENST00000276585 CPA6Q8N4T0 437 aa13.08□□□□□ -0.32
MRPS28-201ENST00000276585 CCDC33Q8N5R6 958 aa13.08□□□□□ -0.32
MRPS28-201ENST00000276585 DEFB119Q8N690 84 aa13.08□□□□□ -0.32
MRPS28-201ENST00000276585 PDCD7Q8N8D1 485 aaKnown RBP13.08□□□□□ -0.32
MRPS28-201ENST00000276585 SPATA20Q8TB22 786 aa13.08□□□□□ -0.32
MRPS28-201ENST00000276585 RIN3Q8TB24 985 aa13.08□□□□□ -0.32
MRPS28-201ENST00000276585 TMC2Q8TDI7 906 aa13.08□□□□□ -0.32
MRPS28-201ENST00000276585 FUBP3Q96I24 572 aaKnown RBP eCLIP13.08□□□□□ -0.32
MRPS28-201ENST00000276585 KIAA1522Q9P206 1035 aaPredicted RBP13.08□□□□□ -0.32
MRPS28-201ENST00000276585 CDH9Q9ULB4 789 aa13.08□□□□□ -0.32
MRPS28-201ENST00000276585 PTPRBP23467 1997 aa13.08□□□□□ -0.32
MRPS28-201ENST00000276585 TNRC6BQ9UPQ9 1833 aaKnown RBP13.08□□□□□ -0.32
MRPS28-201ENST00000276585 PTPRQQ9UMZ3 2332 aa13.07□□□□□ -0.32
MRPS28-201ENST00000276585 FAM149AA5PLN7 773 aa13.07□□□□□ -0.32
MRPS28-201ENST00000276585 GOLGA8CPA6NN73 597 aa13.07□□□□□ -0.32
MRPS28-201ENST00000276585 MAPK13O15264 365 aa13.07□□□□□ -0.32
MRPS28-201ENST00000276585 AP5Z1O43299 807 aa13.07□□□□□ -0.32
MRPS28-201ENST00000276585 WISP1O95388 367 aa13.07□□□□□ -0.32
MRPS28-201ENST00000276585 PDGFRBP09619 1106 aa13.07□□□□□ -0.32
MRPS28-201ENST00000276585 CDC25CP30307 473 aa13.07□□□□□ -0.32
MRPS28-201ENST00000276585 CACNA2D1P54289 1103 aa13.07□□□□□ -0.32
MRPS28-201ENST00000276585 RPL6Q02878 288 aaKnown RBP13.07□□□□□ -0.32
MRPS28-201ENST00000276585 FAM160A1Q05DH4 1040 aa13.07□□□□□ -0.32
MRPS28-201ENST00000276585 NCOA4Q13772 614 aa13.07□□□□□ -0.32
MRPS28-201ENST00000276585 CRY1Q16526 586 aa13.07□□□□□ -0.32
MRPS28-201ENST00000276585 WDR72Q3MJ13 1102 aa13.07□□□□□ -0.32
MRPS28-201ENST00000276585 GPR155Q7Z3F1 870 aa13.07□□□□□ -0.32
MRPS28-201ENST00000276585 GLRX5Q86SX6 157 aa13.07□□□□□ -0.32
MRPS28-201ENST00000276585 PGBD3Q8N328 593 aa13.07□□□□□ -0.32
MRPS28-201ENST00000276585 GALNT15Q8N3T1 639 aa13.07□□□□□ -0.32
MRPS28-201ENST00000276585 USP33Q8TEY7 942 aa13.07□□□□□ -0.32
MRPS28-201ENST00000276585 SETD7Q8WTS6 366 aaKnown RBP13.07□□□□□ -0.32
MRPS28-201ENST00000276585 ERCC4Q92889 916 aaPredicted RBP13.07□□□□□ -0.32
MRPS28-201ENST00000276585 TRMT2BQ96GJ1 504 aaKnown RBP13.07□□□□□ -0.32
MRPS28-201ENST00000276585 PCED1BQ96HM7 432 aa13.07□□□□□ -0.32
MRPS28-201ENST00000276585 MYRFLQ96LU7 910 aa13.07□□□□□ -0.32
MRPS28-201ENST00000276585 MMS19Q96T76 1030 aa13.07□□□□□ -0.32
MRPS28-201ENST00000276585 SLC46A2Q9BY10 475 aa13.07□□□□□ -0.32
MRPS28-201ENST00000276585 MMP17Q9ULZ9 603 aa13.07□□□□□ -0.32
MRPS28-201ENST00000276585 RRP8O43159 456 aaKnown RBP13.06□□□□□ -0.32
MRPS28-201ENST00000276585 CALUO43852 315 aaPredicted RBP13.06□□□□□ -0.32
MRPS28-201ENST00000276585 FAM163BP0C2L3 166 aa13.06□□□□□ -0.32
MRPS28-201ENST00000276585 TRIM49P0CI25 452 aa13.06□□□□□ -0.32
MRPS28-201ENST00000276585 TRIM49CP0CI26 452 aa13.06□□□□□ -0.32
MRPS28-201ENST00000276585 CSH1P0DML2 217 aa13.06□□□□□ -0.32
MRPS28-201ENST00000276585 CSH2P0DML3 217 aa13.06□□□□□ -0.32
MRPS28-201ENST00000276585 NR2F2P24468 414 aa13.06□□□□□ -0.32
MRPS28-201ENST00000276585 ATICP31939 592 aa13.06□□□□□ -0.32
MRPS28-201ENST00000276585 AVPR1AP37288 418 aa13.06□□□□□ -0.32
MRPS28-201ENST00000276585 AP3M2P53677 418 aa13.06□□□□□ -0.32
MRPS28-201ENST00000276585 CDH8P55286 799 aa13.06□□□□□ -0.32
MRPS28-201ENST00000276585 BIRC3Q13489 604 aa13.06□□□□□ -0.32
MRPS28-201ENST00000276585 PDGFRLQ15198 375 aa13.06□□□□□ -0.32
MRPS28-201ENST00000276585 ZNF699Q32M78 642 aa13.06□□□□□ -0.32
MRPS28-201ENST00000276585 MDH1BQ5I0G3 518 aa13.06□□□□□ -0.32
MRPS28-201ENST00000276585 CEP135Q66GS9 1140 aa13.06□□□□□ -0.32
MRPS28-201ENST00000276585 SV2AQ7L0J3 742 aa13.06□□□□□ -0.32
MRPS28-201ENST00000276585 SPATA2LQ8IUW3 424 aaPredicted RBP13.06□□□□□ -0.32
MRPS28-201ENST00000276585 CMTM8Q8IZV2 173 aa13.06□□□□□ -0.32
MRPS28-201ENST00000276585 SPDYE1Q8NFV5 336 aaPredicted RBP13.06□□□□□ -0.32
MRPS28-201ENST00000276585 MYCBPAPQ8TBZ2 947 aa13.06□□□□□ -0.32
MRPS28-201ENST00000276585 SYAP1Q96A49 352 aaPredicted RBP13.06□□□□□ -0.32
MRPS28-201ENST00000276585 ECT2Q9H8V3 914 aa13.06□□□□□ -0.32
MRPS28-201ENST00000276585 HMGXB4Q9UGU5 601 aa13.06□□□□□ -0.32
MRPS28-201ENST00000276585 CCL26Q9Y258 94 aa13.06□□□□□ -0.32
MRPS28-201ENST00000276585 COL6A6A6NMZ7 2263 aa13.06□□□□□ -0.32
MRPS28-201ENST00000276585 MYOFQ9NZM1 2061 aa13.06□□□□□ -0.32
MRPS28-201ENST00000276585 PCDH15Q96QU1 1955 aa13.05□□□□□ -0.32
MRPS28-201ENST00000276585 TEX15Q9BXT5 2789 aa13.05□□□□□ -0.32
MRPS28-201ENST00000276585 GADD45BO75293 160 aaPredicted RBP13.05□□□□□ -0.32
MRPS28-201ENST00000276585 GJB3O75712 270 aa13.05□□□□□ -0.32
MRPS28-201ENST00000276585 ASS1P00966 412 aaKnown RBP13.05□□□□□ -0.32
MRPS28-201ENST00000276585 BDNFP23560 247 aa13.05□□□□□ -0.32
MRPS28-201ENST00000276585 GNL1P36915 607 aaPredicted RBP13.05□□□□□ -0.32
MRPS28-201ENST00000276585 PRCPP42785 496 aa13.05□□□□□ -0.32
MRPS28-201ENST00000276585 USP46P62068 366 aa13.05□□□□□ -0.32
MRPS28-201ENST00000276585 RPL10AP62906 217 aaKnown RBP13.05□□□□□ -0.32
MRPS28-201ENST00000276585 TNNC1P63316 161 aa13.05□□□□□ -0.32
MRPS28-201ENST00000276585 PPP3CAQ08209 521 aa13.05□□□□□ -0.32
MRPS28-201ENST00000276585 TRPC3Q13507 836 aa13.05□□□□□ -0.32
MRPS28-201ENST00000276585 CAMK2BQ13554 666 aa13.05□□□□□ -0.32
MRPS28-201ENST00000276585 MAP7D1Q3KQU3 841 aa13.05□□□□□ -0.32
MRPS28-201ENST00000276585 COBLL1Q53SF7 1204 aa13.05□□□□□ -0.32
MRPS28-201ENST00000276585 SPOPLQ6IQ16 392 aa13.05□□□□□ -0.32
MRPS28-201ENST00000276585 TMEM92Q6UXU6 159 aa13.05□□□□□ -0.32
MRPS28-201ENST00000276585 SCARA5Q6ZMJ2 495 aa13.05□□□□□ -0.32
MRPS28-201ENST00000276585 C4orf50Q6ZRC1 276 aa13.05□□□□□ -0.32
MRPS28-201ENST00000276585 ZC3H3Q8IXZ2 948 aaKnown RBP13.05□□□□□ -0.32
MRPS28-201ENST00000276585 TTC16Q8NEE8 873 aa13.05□□□□□ -0.32
MRPS28-201ENST00000276585 HMGB4Q8WW32 186 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms