RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 POLR2CP19387 275 aaPredicted RBP9.54□□□□□ -0.88
PDGFC-201ENST00000274071 POLR2BP30876 1174 aaKnown RBP9.54□□□□□ -0.88
PDGFC-201ENST00000274071 GRM5P41594 1212 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 RCAN1P53805 252 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 ALDH18A1P54886 795 aaKnown RBP9.54□□□□□ -0.88
PDGFC-201ENST00000274071 GNG2P59768 71 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 ESRRGP62508 458 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 PHC1P78364 1004 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 GALNT2Q10471 571 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 NPTX1Q15818 432 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 PERM1Q5SV97 790 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 ZNF618Q5T7W0 954 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 BTLAQ7Z6A9 289 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 DGKHQ86XP1 1220 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 BRSK2Q8IWQ3 736 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 DEPDC4Q8N2C3 294 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 UBL4BQ8N7F7 174 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 SLC30A5Q8TAD4 765 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 NPLOC4Q8TAT6 608 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 NLRP4Q96MN2 994 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 TSG101Q99816 390 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 ZSWIM1Q9BR11 485 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 MRPL9Q9BYD2 267 aaKnown RBP9.54□□□□□ -0.88
PDGFC-201ENST00000274071 CNNM2Q9H8M5 875 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 EPS15L1Q9UBC2 864 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 MYRFQ9Y2G1 1151 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 ESYT2A0FGR8 921 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 ATP2A1O14983 1001 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 IDH3BO43837 385 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 ABHD2P08910 425 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 ZNF182P17025 639 aaPredicted RBP9.54□□□□□ -0.88
PDGFC-201ENST00000274071 PRKACAP17612 351 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 ANXA13P27216 316 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 DLG4P78352 724 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 BASP1P80723 227 aaKnown RBP9.54□□□□□ -0.88
PDGFC-201ENST00000274071 KCNH2Q12809 1159 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 UBAP2LQ14157 1087 aaKnown RBP9.54□□□□□ -0.88
PDGFC-201ENST00000274071 INAVAQ3KP66 663 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 ATAD3BQ5T9A4 648 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 GALNT18Q6P9A2 607 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 DYMQ7RTS9 669 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 RELL1Q8IUW5 271 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 GLYCTKQ8IVS8 523 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 PROM2Q8N271 834 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 OLIG1Q8TAK6 271 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 NLRP7Q8WX94 980 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 SLCO2A1Q92959 643 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 LRGUKQ96M69 825 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 FRMD8Q9BZ67 464 aaPredicted RBP9.54□□□□□ -0.88
PDGFC-201ENST00000274071 THAP2Q9H0W7 228 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 SMARCAD1Q9H4L7 1026 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 GDAP2Q9NXN4 497 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 KCNK4Q9NYG8 393 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 SF3B1O75533 1304 aaKnown RBP eCLIP9.54□□□□□ -0.88
PDGFC-201ENST00000274071 RIC1Q4ADV7 1423 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 MYMKA6NI61 221 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 SNTNA6NMZ2 147 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 PDE8BO95263 885 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 PROCP04070 461 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 CCDC159P0C7I6 412 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 PCP11498 1178 aaKnown RBP9.54□□□□□ -0.88
PDGFC-201ENST00000274071 PLS3P13797 630 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 ADD2P35612 726 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 GNL1P36915 607 aaPredicted RBP9.54□□□□□ -0.88
PDGFC-201ENST00000274071 CAV1Q03135 178 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 CCNG2Q16589 344 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 SEL1L2Q5TEA6 688 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 RNF207Q6ZRF8 634 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 DSG4Q86SJ6 1040 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 ADCY4Q8NFM4 1077 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 DOK1Q99704 481 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 CXorf21Q9HAI6 301 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 SCUBE2Q9NQ36 999 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 ABI2Q9NYB9 513 aaPredicted RBP9.54□□□□□ -0.88
PDGFC-201ENST00000274071 TXNDC16Q9P2K2 825 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 AJAP1Q9UKB5 411 aaPredicted RBP9.54□□□□□ -0.88
PDGFC-201ENST00000274071 PCDHA12Q9UN75 941 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 SPEF2Q9C093 1822 aa9.53□□□□□ -0.88
PDGFC-201ENST00000274071 A8MX80 341 aa9.53□□□□□ -0.88
PDGFC-201ENST00000274071 MIF4GDA9UHW6 222 aaKnown RBP9.53□□□□□ -0.88
PDGFC-201ENST00000274071 TAF4O00268 1085 aa9.53□□□□□ -0.88
PDGFC-201ENST00000274071 EIF2AK2P19525 551 aaKnown RBP9.53□□□□□ -0.88
PDGFC-201ENST00000274071 BGNP21810 368 aa9.53□□□□□ -0.88
PDGFC-201ENST00000274071 RRM1P23921 792 aa9.53□□□□□ -0.88
PDGFC-201ENST00000274071 GRK2P25098 689 aa9.53□□□□□ -0.88
PDGFC-201ENST00000274071 RPL10P27635 214 aaKnown RBP9.53□□□□□ -0.88
PDGFC-201ENST00000274071 HADHAP40939 763 aa9.53□□□□□ -0.88
PDGFC-201ENST00000274071 B2MP61769 119 aa9.53□□□□□ -0.88
PDGFC-201ENST00000274071 COL19A1Q14993 1142 aa9.53□□□□□ -0.88
PDGFC-201ENST00000274071 INSCQ1MX18 579 aa9.53□□□□□ -0.88
PDGFC-201ENST00000274071 CENPUQ71F23 418 aa9.53□□□□□ -0.88
PDGFC-201ENST00000274071 NOP9Q86U38 636 aaKnown RBP9.53□□□□□ -0.88
PDGFC-201ENST00000274071 SPARTQ8N0X7 666 aa9.53□□□□□ -0.88
PDGFC-201ENST00000274071 RASGRP4Q8TDF6 673 aa9.53□□□□□ -0.88
PDGFC-201ENST00000274071 GRK7Q8WTQ7 553 aa9.53□□□□□ -0.88
PDGFC-201ENST00000274071 ACDQ96AP0 544 aa9.53□□□□□ -0.88
PDGFC-201ENST00000274071 SDCCAG3Q96C92 435 aa9.53□□□□□ -0.88
PDGFC-201ENST00000274071 CFAP57Q96MR6 1250 aa9.53□□□□□ -0.88
PDGFC-201ENST00000274071 C7orf26Q96N11 449 aa9.53□□□□□ -0.88
PDGFC-201ENST00000274071 CDK5RAP1Q96SZ6 601 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms