RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 CYP2F1P24903 491 aa11.82□□□□□ -0.52
USP53-201ENST00000274030 PGM5Q15124 567 aa11.82□□□□□ -0.52
USP53-201ENST00000274030 CYP51A1Q16850 503 aa11.82□□□□□ -0.52
USP53-201ENST00000274030 FBXO47Q5MNV8 452 aa11.82□□□□□ -0.52
USP53-201ENST00000274030 DAB2IPQ5VWQ8 1189 aa11.82□□□□□ -0.52
USP53-201ENST00000274030 MOXD1Q6UVY6 613 aa11.82□□□□□ -0.52
USP53-201ENST00000274030 ARHGEF19Q8IW93 802 aa11.82□□□□□ -0.52
USP53-201ENST00000274030 PHF21BQ96EK2 531 aa11.82□□□□□ -0.52
USP53-201ENST00000274030 CLPBQ9H078 707 aa11.82□□□□□ -0.52
USP53-201ENST00000274030 OSGEPL1Q9H4B0 414 aa11.82□□□□□ -0.52
USP53-201ENST00000274030 IMPAD1Q9NX62 359 aa11.82□□□□□ -0.52
USP53-201ENST00000274030 O00370 1275 aa11.82□□□□□ -0.52
USP53-201ENST00000274030 NR5A2O00482 541 aa11.82□□□□□ -0.52
USP53-201ENST00000274030 PLA2G6O60733 806 aa11.82□□□□□ -0.52
USP53-201ENST00000274030 GZMAP12544 262 aa11.82□□□□□ -0.52
USP53-201ENST00000274030 POU1F1P28069 291 aa11.82□□□□□ -0.52
USP53-201ENST00000274030 NDST1P52848 882 aa11.82□□□□□ -0.52
USP53-201ENST00000274030 KDM7AQ6ZMT4 941 aa11.82□□□□□ -0.52
USP53-201ENST00000274030 ILDR2Q71H61 639 aa11.82□□□□□ -0.52
USP53-201ENST00000274030 CHMP1BQ7LBR1 199 aa11.82□□□□□ -0.52
USP53-201ENST00000274030 WDR49Q8IV35 697 aa11.82□□□□□ -0.52
USP53-201ENST00000274030 C4orf19Q8IY42 314 aa11.82□□□□□ -0.52
USP53-201ENST00000274030 ATXN3LQ9H3M9 355 aa11.82□□□□□ -0.52
USP53-201ENST00000274030 MROH8Q9H579 483 aa11.82□□□□□ -0.52
USP53-201ENST00000274030 RIOX1Q9H6W3 641 aa11.82□□□□□ -0.52
USP53-201ENST00000274030 RBM22Q9NW64 420 aaKnown RBP eCLIP11.82□□□□□ -0.52
USP53-201ENST00000274030 TRPM5Q9NZQ8 1165 aa11.82□□□□□ -0.52
USP53-201ENST00000274030 KIAA1257Q9ULG3 409 aa11.82□□□□□ -0.52
USP53-201ENST00000274030 LINC00854A0A1B0GVQ3 168 aa11.81□□□□□ -0.52
USP53-201ENST00000274030 RASSF9O75901 435 aa11.81□□□□□ -0.52
USP53-201ENST00000274030 EPHX2P34913 555 aa11.81□□□□□ -0.52
USP53-201ENST00000274030 CES3Q6UWW8 571 aa11.81□□□□□ -0.52
USP53-201ENST00000274030 EFL1Q7Z2Z2 1120 aaKnown RBP11.81□□□□□ -0.52
USP53-201ENST00000274030 OOSP2Q86WS3 158 aa11.81□□□□□ -0.52
USP53-201ENST00000274030 HNRNPLLQ8WVV9 542 aaKnown RBP11.81□□□□□ -0.52
USP53-201ENST00000274030 BBS2Q9BXC9 721 aa11.81□□□□□ -0.52
USP53-201ENST00000274030 SPATC1LQ9H0A9 340 aa11.81□□□□□ -0.52
USP53-201ENST00000274030 GPRC5DQ9NZD1 345 aa11.81□□□□□ -0.52
USP53-201ENST00000274030 TSPAN16Q9UKR8 245 aa11.81□□□□□ -0.52
USP53-201ENST00000274030 TIMM44O43615 452 aa11.81□□□□□ -0.52
USP53-201ENST00000274030 ZCCHC18P0CG32 403 aa11.81□□□□□ -0.52
USP53-201ENST00000274030 MLH1P40692 756 aa11.81□□□□□ -0.52
USP53-201ENST00000274030 MRPL28Q13084 256 aaKnown RBP11.81□□□□□ -0.52
USP53-201ENST00000274030 WLSQ5T9L3 541 aa11.81□□□□□ -0.52
USP53-201ENST00000274030 SCUBE3Q8IX30 993 aa11.81□□□□□ -0.52
USP53-201ENST00000274030 AAASQ9NRG9 546 aa11.81□□□□□ -0.52
USP53-201ENST00000274030 WHRNQ9P202 907 aa11.81□□□□□ -0.52
USP53-201ENST00000274030 VPS9D1Q9Y2B5 631 aa11.81□□□□□ -0.52
USP53-201ENST00000274030 APOA4P06727 396 aa11.81□□□□□ -0.52
USP53-201ENST00000274030 CD302Q8IX05 232 aa11.81□□□□□ -0.52
USP53-201ENST00000274030 TMC2Q8TDI7 906 aa11.81□□□□□ -0.52
USP53-201ENST00000274030 SEMA4DQ92854 862 aa11.81□□□□□ -0.52
USP53-201ENST00000274030 ZBTB45Q96K62 511 aaPredicted RBP11.81□□□□□ -0.52
USP53-201ENST00000274030 MAGEB10Q96LZ2 347 aaPredicted RBP11.81□□□□□ -0.52
USP53-201ENST00000274030 TMBIM4Q9HC24 238 aa11.81□□□□□ -0.52
USP53-201ENST00000274030 DCDC2CA8MYV0 355 aa11.81□□□□□ -0.52
USP53-201ENST00000274030 H2AFYO75367 372 aaKnown RBP11.81□□□□□ -0.52
USP53-201ENST00000274030 ALDH1A2O94788 518 aa11.81□□□□□ -0.52
USP53-201ENST00000274030 CCDC159P0C7I6 412 aa11.81□□□□□ -0.52
USP53-201ENST00000274030 PSMA4P25789 261 aaKnown RBP11.81□□□□□ -0.52
USP53-201ENST00000274030 SHMT1P34896 483 aa11.81□□□□□ -0.52
USP53-201ENST00000274030 ADIGQ0VDE8 80 aa11.81□□□□□ -0.52
USP53-201ENST00000274030 MPP3Q13368 585 aa11.81□□□□□ -0.52
USP53-201ENST00000274030 TP53BP2Q13625 1128 aa11.81□□□□□ -0.52
USP53-201ENST00000274030 ANGPT1Q15389 498 aa11.81□□□□□ -0.52
USP53-201ENST00000274030 MAP1SQ66K74 1059 aaPredicted RBP11.81□□□□□ -0.52
USP53-201ENST00000274030 SEL1L3Q68CR1 1132 aa11.81□□□□□ -0.52
USP53-201ENST00000274030 METTL7BQ6UX53 244 aa11.81□□□□□ -0.52
USP53-201ENST00000274030 CACUL1Q86Y37 369 aa11.81□□□□□ -0.52
USP53-201ENST00000274030 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.81□□□□□ -0.52
USP53-201ENST00000274030 GMCL1P1Q8NEA9 526 aa11.81□□□□□ -0.52
USP53-201ENST00000274030 PAWRQ96IZ0 340 aaKnown RBP11.81□□□□□ -0.52
USP53-201ENST00000274030 PALMDQ9NP74 551 aa11.81□□□□□ -0.52
USP53-201ENST00000274030 KCNQ5Q9NR82 932 aa11.81□□□□□ -0.52
USP53-201ENST00000274030 ADARB2Q9NS39 739 aaKnown RBP11.81□□□□□ -0.52
USP53-201ENST00000274030 H7C4K7 107 aa11.81□□□□□ -0.52
USP53-201ENST00000274030 MYL4P12829 197 aa11.81□□□□□ -0.52
USP53-201ENST00000274030 NFYCQ13952 458 aa11.81□□□□□ -0.52
USP53-201ENST00000274030 MYO1HQ8N1T3 1032 aa11.81□□□□□ -0.52
USP53-201ENST00000274030 EXD1Q8NHP7 514 aa11.81□□□□□ -0.52
USP53-201ENST00000274030 ZNF606Q8WXB4 792 aa11.81□□□□□ -0.52
USP53-201ENST00000274030 UBE2OQ9C0C9 1292 aaKnown RBP11.81□□□□□ -0.52
USP53-201ENST00000274030 TMEM245Q9H330 911 aa11.81□□□□□ -0.52
USP53-201ENST00000274030 GNG14A0A1W2PPG7 69 aa11.8□□□□□ -0.52
USP53-201ENST00000274030 GOLGA8TH3BQL2 631 aa11.8□□□□□ -0.52
USP53-201ENST00000274030 RNF103O00237 685 aa11.8□□□□□ -0.52
USP53-201ENST00000274030 USP1O94782 785 aa11.8□□□□□ -0.52
USP53-201ENST00000274030 URODP06132 367 aa11.8□□□□□ -0.52
USP53-201ENST00000274030 PCNAP12004 261 aa11.8□□□□□ -0.52
USP53-201ENST00000274030 HNRNPH1P31943 449 aaKnown RBP11.8□□□□□ -0.52
USP53-201ENST00000274030 CHI3L1P36222 383 aaPredicted RBP11.8□□□□□ -0.52
USP53-201ENST00000274030 RARRES1P49788 294 aa11.8□□□□□ -0.52
USP53-201ENST00000274030 CAMK2GQ13555 558 aaPredicted RBP11.8□□□□□ -0.52
USP53-201ENST00000274030 PAPD7Q5XG87 772 aaKnown RBP11.8□□□□□ -0.52
USP53-201ENST00000274030 TIGD7Q6NT04 549 aaPredicted RBP11.8□□□□□ -0.52
USP53-201ENST00000274030 CYB5D1Q6P9G0 228 aa11.8□□□□□ -0.52
USP53-201ENST00000274030 TMC7Q7Z402 723 aa11.8□□□□□ -0.52
USP53-201ENST00000274030 ABRAQ8N0Z2 381 aa11.8□□□□□ -0.52
USP53-201ENST00000274030 ACOT9Q9Y305 439 aa11.8□□□□□ -0.52
USP53-201ENST00000274030 BAZ2BQ9UIF8 2168 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms