RNA–Protein interactions for RNA: ENST00000268603.8

CDH11-201, Transcript of cadherin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH11, Length 6,857 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-201ENST00000268603 H7C1W4 665 aa12.98□□□□□ -0.33
CDH11-201ENST00000268603 PQBP1O60828 265 aaKnown RBP12.98□□□□□ -0.33
CDH11-201ENST00000268603 TGM2P21980 687 aa12.98□□□□□ -0.33
CDH11-201ENST00000268603 CCSAPQ6IQ19 270 aaPredicted RBP12.98□□□□□ -0.33
CDH11-201ENST00000268603 PMF1Q6P1K2 205 aa12.98□□□□□ -0.33
CDH11-201ENST00000268603 ARRDC4Q8NCT1 418 aa12.98□□□□□ -0.33
CDH11-201ENST00000268603 NEK6Q9HC98 313 aa12.98□□□□□ -0.33
CDH11-201ENST00000268603 TMEM39AQ9NV64 488 aa12.98□□□□□ -0.33
CDH11-201ENST00000268603 GGA3Q9NZ52 723 aa12.98□□□□□ -0.33
CDH11-201ENST00000268603 VAV3Q9UKW4 847 aa12.98□□□□□ -0.33
CDH11-201ENST00000268603 ERVV-1B6SEH8 477 aa12.98□□□□□ -0.33
CDH11-201ENST00000268603 NR5A2O00482 541 aa12.98□□□□□ -0.33
CDH11-201ENST00000268603 SKIV2L2P42285 1042 aaKnown RBP12.98□□□□□ -0.33
CDH11-201ENST00000268603 SCRN3Q0VDG4 424 aa12.98□□□□□ -0.33
CDH11-201ENST00000268603 STX5Q13190 355 aa12.98□□□□□ -0.33
CDH11-201ENST00000268603 ATP6AP1LQ52LC2 224 aa12.98□□□□□ -0.33
CDH11-201ENST00000268603 OMDQ99983 421 aa12.98□□□□□ -0.33
CDH11-201ENST00000268603 CDY2AQ9Y6F7 541 aa12.98□□□□□ -0.33
CDH11-201ENST00000268603 CDY1Q9Y6F8 540 aa12.98□□□□□ -0.33
CDH11-201ENST00000268603 TBX3O15119 743 aa12.98□□□□□ -0.33
CDH11-201ENST00000268603 HOXA2O43364 376 aa12.98□□□□□ -0.33
CDH11-201ENST00000268603 ASNA1O43681 348 aa12.98□□□□□ -0.33
CDH11-201ENST00000268603 KATNA1O75449 491 aa12.98□□□□□ -0.33
CDH11-201ENST00000268603 ITGB3P05106 788 aa12.98□□□□□ -0.33
CDH11-201ENST00000268603 CPA2P48052 419 aa12.98□□□□□ -0.33
CDH11-201ENST00000268603 THOP1P52888 689 aa12.98□□□□□ -0.33
CDH11-201ENST00000268603 SLC45A4Q5BKX6 768 aa12.98□□□□□ -0.33
CDH11-201ENST00000268603 STRIP1Q5VSL9 837 aa12.98□□□□□ -0.33
CDH11-201ENST00000268603 FAM228AQ86W67 206 aa12.98□□□□□ -0.33
CDH11-201ENST00000268603 STARD7Q9NQZ5 370 aa12.98□□□□□ -0.33
CDH11-201ENST00000268603 MROH7-TTC4A0A0A0MT08 1334 aa12.98□□□□□ -0.33
CDH11-201ENST00000268603 B2RBV5 119 aa12.98□□□□□ -0.33
CDH11-201ENST00000268603 FAM20BO75063 409 aa12.98□□□□□ -0.33
CDH11-201ENST00000268603 TCEA3O75764 348 aa12.98□□□□□ -0.33
CDH11-201ENST00000268603 TSPAN9O75954 239 aa12.98□□□□□ -0.33
CDH11-201ENST00000268603 ATP1A3P13637 1013 aa12.98□□□□□ -0.33
CDH11-201ENST00000268603 SKP1P63208 163 aa12.98□□□□□ -0.33
CDH11-201ENST00000268603 SPPL2AQ8TCT8 520 aa12.98□□□□□ -0.33
CDH11-201ENST00000268603 COL26A1Q96A83 441 aa12.98□□□□□ -0.33
CDH11-201ENST00000268603 SERPINB12Q96P63 405 aa12.98□□□□□ -0.33
CDH11-201ENST00000268603 QKIQ96PU8 341 aaKnown RBP eCLIP12.98□□□□□ -0.33
CDH11-201ENST00000268603 GRID1Q9ULK0 1009 aa12.98□□□□□ -0.33
CDH11-201ENST00000268603 WWP2O00308 870 aa12.98□□□□□ -0.33
CDH11-201ENST00000268603 KIAA1324Q6UXG2 1013 aaKnown RBP12.98□□□□□ -0.33
CDH11-201ENST00000268603 TEX13BQ9BXU2 312 aa12.98□□□□□ -0.33
CDH11-201ENST00000268603 RRN3P2A6NIE6 340 aa12.97□□□□□ -0.33
CDH11-201ENST00000268603 CCDC85CA6NKD9 419 aa12.97□□□□□ -0.33
CDH11-201ENST00000268603 SLC25A12O75746 678 aa12.97□□□□□ -0.33
CDH11-201ENST00000268603 ACO1P21399 889 aaKnown RBP12.97□□□□□ -0.33
CDH11-201ENST00000268603 PTSQ03393 145 aa12.97□□□□□ -0.33
CDH11-201ENST00000268603 DAPK2Q9UIK4 370 aa12.97□□□□□ -0.33
CDH11-201ENST00000268603 TBKBP1A7MCY6 615 aa12.97□□□□□ -0.33
CDH11-201ENST00000268603 H3BN98 237 aa12.97□□□□□ -0.33
CDH11-201ENST00000268603 MGRN1O60291 552 aa12.97□□□□□ -0.33
CDH11-201ENST00000268603 HSPA13P48723 471 aa12.97□□□□□ -0.33
CDH11-201ENST00000268603 C21orf59P57076 290 aa12.97□□□□□ -0.33
CDH11-201ENST00000268603 RESP18Q5W5W9 173 aa12.97□□□□□ -0.33
CDH11-201ENST00000268603 ACSF2Q96CM8 615 aaPredicted RBP12.97□□□□□ -0.33
CDH11-201ENST00000268603 ADGRE3Q9BY15 652 aa12.97□□□□□ -0.33
CDH11-201ENST00000268603 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.97□□□□□ -0.33
CDH11-201ENST00000268603 COPG2Q9UBF2 871 aa12.97□□□□□ -0.33
CDH11-201ENST00000268603 SMG5Q9UPR3 1016 aaKnown RBP12.97□□□□□ -0.33
CDH11-201ENST00000268603 PITPNM2Q9BZ72 1349 aa12.97□□□□□ -0.33
CDH11-201ENST00000268603 A0A1W2PRG6 482 aa12.97□□□□□ -0.33
CDH11-201ENST00000268603 IDH3BO43837 385 aa12.97□□□□□ -0.33
CDH11-201ENST00000268603 SH3BGRLO75368 114 aa12.97□□□□□ -0.33
CDH11-201ENST00000268603 CYP2A7P20853 494 aa12.97□□□□□ -0.33
CDH11-201ENST00000268603 GTF2H1P32780 548 aa12.97□□□□□ -0.33
CDH11-201ENST00000268603 MYBPC1Q00872 1141 aa12.97□□□□□ -0.33
CDH11-201ENST00000268603 VAC14Q08AM6 782 aa12.97□□□□□ -0.33
CDH11-201ENST00000268603 FAM71DQ8N9W8 422 aa12.97□□□□□ -0.33
CDH11-201ENST00000268603 ENKURQ8TC29 256 aa12.97□□□□□ -0.33
CDH11-201ENST00000268603 ATXN3LQ9H3M9 355 aa12.97□□□□□ -0.33
CDH11-201ENST00000268603 DPP3Q9NY33 737 aa12.97□□□□□ -0.33
CDH11-201ENST00000268603 GPRC5DQ9NZD1 345 aa12.97□□□□□ -0.33
CDH11-201ENST00000268603 DLGAP2Q9P1A6 1054 aa12.97□□□□□ -0.33
CDH11-201ENST00000268603 USP18Q9UMW8 372 aa12.97□□□□□ -0.33
CDH11-201ENST00000268603 NEDD4P46934 1319 aa12.97□□□□□ -0.33
CDH11-201ENST00000268603 TRIM3O75382 744 aaPredicted RBP12.97□□□□□ -0.33
CDH11-201ENST00000268603 CD2BP2O95400 341 aaKnown RBP12.97□□□□□ -0.33
CDH11-201ENST00000268603 GLRBP48167 497 aa12.97□□□□□ -0.33
CDH11-201ENST00000268603 COPZ1P61923 177 aa12.97□□□□□ -0.33
CDH11-201ENST00000268603 CRYMQ14894 314 aa12.97□□□□□ -0.33
CDH11-201ENST00000268603 C2CD6Q53TS8 623 aa12.97□□□□□ -0.33
CDH11-201ENST00000268603 SYDE1Q6ZW31 735 aaPredicted RBP12.97□□□□□ -0.33
CDH11-201ENST00000268603 FAM135BQ49AJ0 1406 aa12.97□□□□□ -0.33
CDH11-201ENST00000268603 PP2D1A8MPX8 630 aa12.97□□□□□ -0.33
CDH11-201ENST00000268603 DGAT1O75907 488 aa12.97□□□□□ -0.33
CDH11-201ENST00000268603 ACAP2Q15057 778 aa12.97□□□□□ -0.33
CDH11-201ENST00000268603 CBWD3Q5JTY5 395 aa12.97□□□□□ -0.33
CDH11-201ENST00000268603 CBWD5Q5RIA9 395 aa12.97□□□□□ -0.33
CDH11-201ENST00000268603 GPAT2Q6NUI2 795 aa12.97□□□□□ -0.33
CDH11-201ENST00000268603 SLC35G2Q8TBE7 412 aa12.97□□□□□ -0.33
CDH11-201ENST00000268603 MCRS1Q96EZ8 462 aa12.97□□□□□ -0.33
CDH11-201ENST00000268603 PTPRHQ9HD43 1115 aa12.97□□□□□ -0.33
CDH11-201ENST00000268603 LYVE1Q9Y5Y7 322 aa12.97□□□□□ -0.33
CDH11-201ENST00000268603 ARAP3Q8WWN8 1544 aa12.97□□□□□ -0.33
CDH11-201ENST00000268603 MOXD2PA6NHM9 499 aa12.97□□□□□ -0.33
CDH11-201ENST00000268603 RPS6KA4O75676 772 aa12.97□□□□□ -0.33
CDH11-201ENST00000268603 SNRPAP09012 282 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms