RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 PLCL2Q9UPR0 1127 aa11.49□□□□□ -0.57
CHFR-201ENST00000266880 CITO14578 2027 aa11.49□□□□□ -0.57
CHFR-201ENST00000266880 A0A1W2PQC6 194 aa11.49□□□□□ -0.57
CHFR-201ENST00000266880 FAM47E-STBD1D6RA91 191 aa11.49□□□□□ -0.57
CHFR-201ENST00000266880 DBTP11182 482 aaKnown RBP11.49□□□□□ -0.57
CHFR-201ENST00000266880 FASP25445 335 aa11.49□□□□□ -0.57
CHFR-201ENST00000266880 LIN54Q6MZP7 749 aa11.49□□□□□ -0.57
CHFR-201ENST00000266880 CYP2R1Q6VVX0 501 aa11.49□□□□□ -0.57
CHFR-201ENST00000266880 ZBTB46Q86UZ6 589 aa11.49□□□□□ -0.57
CHFR-201ENST00000266880 DHFR2Q86XF0 187 aa11.49□□□□□ -0.57
CHFR-201ENST00000266880 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.49□□□□□ -0.57
CHFR-201ENST00000266880 SLC25A13Q9UJS0 675 aa11.49□□□□□ -0.57
CHFR-201ENST00000266880 PLB1Q6P1J6 1458 aa11.49□□□□□ -0.57
CHFR-201ENST00000266880 RBM47A0AV96 593 aaKnown RBP11.48□□□□□ -0.57
CHFR-201ENST00000266880 UBE2QL1A1L167 161 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 H7C0S8 307 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 TCEA3O75764 348 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 FGFR2P21802 821 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 ALDH5A1P51649 535 aaPredicted RBP11.48□□□□□ -0.57
CHFR-201ENST00000266880 PIGHQ14442 188 aaPredicted RBP11.48□□□□□ -0.57
CHFR-201ENST00000266880 SLC18A3Q16572 532 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 PFKFB3Q16875 520 aaPredicted RBP11.48□□□□□ -0.57
CHFR-201ENST00000266880 RUNDC3AQ59EK9 446 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 LRRC17Q8N6Y2 441 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 ZNF879B4DU55 563 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 H3BN98 237 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 FKBP6O75344 327 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 MTFR1Q15390 333 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 IFNLR1Q8IU57 520 aaPredicted RBP11.48□□□□□ -0.57
CHFR-201ENST00000266880 PARP8Q8N3A8 854 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 ZNF224Q9NZL3 707 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 TPRKBQ9Y3C4 175 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 PMF1-BGLAPU3KQ54 211 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 KPNA5O15131 536 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 CCNG1P51959 295 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 PURAQ00577 322 aaKnown RBP11.48□□□□□ -0.57
CHFR-201ENST00000266880 AGAP9Q5VTM2 703 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 ANKS6Q68DC2 871 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 TFB1MQ8WVM0 346 aaKnown RBP11.48□□□□□ -0.57
CHFR-201ENST00000266880 RRN3Q9NYV6 651 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 WDR19Q8NEZ3 1342 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 PSMD14O00487 310 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 KPNA6O60684 536 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 ZNF806P0C7X5 589 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 SCNN1BP51168 640 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 ARHGEF7Q14155 803 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 USP38Q8NB14 1042 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 FAM120BQ96EK7 910 aaKnown RBP11.48□□□□□ -0.57
CHFR-201ENST00000266880 NMRK2Q9NPI5 230 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 SLC35C2Q9NQQ7 365 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 STOML2Q9UJZ1 356 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 PLEKHG1Q9ULL1 1385 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 PDGFRAP16234 1089 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 GRK4P32298 578 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 FNTAP49354 379 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 RPL10AP62906 217 aaKnown RBP11.48□□□□□ -0.57
CHFR-201ENST00000266880 XRCC4Q13426 336 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 METTL16Q86W50 562 aaKnown RBP11.48□□□□□ -0.57
CHFR-201ENST00000266880 KAT2BQ92831 832 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 SEMA4DQ92854 862 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 DOLKQ9UPQ8 538 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 ECDO95905 644 aaPredicted RBP11.48□□□□□ -0.57
CHFR-201ENST00000266880 LIFRP42702 1097 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 LPIN1Q14693 890 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 PROSER3Q2NL68 480 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 PRMT9Q6P2P2 845 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 DNAJC14Q6Y2X3 702 aaPredicted RBP11.48□□□□□ -0.57
CHFR-201ENST00000266880 SH3RF3Q8TEJ3 882 aaPredicted RBP11.48□□□□□ -0.57
CHFR-201ENST00000266880 LIMD1Q9UGP4 676 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 IL12AP29459 219 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 NMT1P30419 496 aaKnown RBP11.48□□□□□ -0.57
CHFR-201ENST00000266880 MAGEA2P43356 314 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 TAF13Q15543 124 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 IRGCQ6NXR0 463 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 BDH2Q9BUT1 245 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 XDHP47989 1333 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 LDLRP01130 860 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 ORC2Q13416 577 aaPredicted RBP11.48□□□□□ -0.57
CHFR-201ENST00000266880 BLOC1S5Q8TDH9 187 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 KCTD4Q8WVF5 259 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 ZNF285Q96NJ3 590 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 ABCC2Q92887 1545 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 PVALEFA0A1B0GWK0 134 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 CRKP46108 304 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 EPC2Q52LR7 807 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 EIF3MQ7L2H7 374 aaKnown RBP11.48□□□□□ -0.57
CHFR-201ENST00000266880 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.48□□□□□ -0.57
CHFR-201ENST00000266880 ZNF605Q86T29 641 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 CCDC185Q8N715 623 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 HMGXB3Q12766 1538 aa11.48□□□□□ -0.57
CHFR-201ENST00000266880 SH3D21A4FU49 640 aa11.47□□□□□ -0.57
CHFR-201ENST00000266880 PDE8BO95263 885 aa11.47□□□□□ -0.57
CHFR-201ENST00000266880 FGD3Q5JSP0 725 aa11.47□□□□□ -0.57
CHFR-201ENST00000266880 PCNX4Q63HM2 1172 aa11.47□□□□□ -0.57
CHFR-201ENST00000266880 SPATA2LQ8IUW3 424 aaPredicted RBP11.47□□□□□ -0.57
CHFR-201ENST00000266880 SLC7A14Q8TBB6 771 aa11.47□□□□□ -0.57
CHFR-201ENST00000266880 NMRK1Q9NWW6 199 aa11.47□□□□□ -0.57
CHFR-201ENST00000266880 UHRF1BP1LA0JNW5 1464 aa11.47□□□□□ -0.57
CHFR-201ENST00000266880 PCCAP05165 728 aaPredicted RBP11.47□□□□□ -0.57
CHFR-201ENST00000266880 GSTM5P46439 218 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms