RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.28□□□□□ -0.76
VPS41-201ENST00000265745 MIA3Q5JRA6 1907 aa10.28□□□□□ -0.76
VPS41-201ENST00000265745 TICRRQ7Z2Z1 1910 aa10.28□□□□□ -0.76
VPS41-201ENST00000265745 CETN3O15182 167 aa10.27□□□□□ -0.77
VPS41-201ENST00000265745 FOXD2O60548 495 aaPredicted RBP10.27□□□□□ -0.77
VPS41-201ENST00000265745 GREM1O60565 184 aa10.27□□□□□ -0.77
VPS41-201ENST00000265745 TLR5O60602 858 aa10.27□□□□□ -0.77
VPS41-201ENST00000265745 KAT7O95251 611 aa10.27□□□□□ -0.77
VPS41-201ENST00000265745 TBX18O95935 607 aa10.27□□□□□ -0.77
VPS41-201ENST00000265745 CCDC192P0DO97 292 aa10.27□□□□□ -0.77
VPS41-201ENST00000265745 CD58P19256 250 aa10.27□□□□□ -0.77
VPS41-201ENST00000265745 TRIM21P19474 475 aaKnown RBP10.27□□□□□ -0.77
VPS41-201ENST00000265745 ADORA2BP29275 332 aa10.27□□□□□ -0.77
VPS41-201ENST00000265745 EIF2DP41214 584 aaKnown RBP10.27□□□□□ -0.77
VPS41-201ENST00000265745 GRIA2P42262 883 aa10.27□□□□□ -0.77
VPS41-201ENST00000265745 PRCPP42785 496 aa10.27□□□□□ -0.77
VPS41-201ENST00000265745 SEC13P55735 322 aa10.27□□□□□ -0.77
VPS41-201ENST00000265745 MRPS21P82921 87 aaKnown RBP10.27□□□□□ -0.77
VPS41-201ENST00000265745 PNOCQ13519 176 aa10.27□□□□□ -0.77
VPS41-201ENST00000265745 CRY1Q16526 586 aa10.27□□□□□ -0.77
VPS41-201ENST00000265745 PLK5Q496M5 336 aa10.27□□□□□ -0.77
VPS41-201ENST00000265745 PRR23CQ6ZRP0 262 aa10.27□□□□□ -0.77
VPS41-201ENST00000265745 HTR3DQ70Z44 454 aa10.27□□□□□ -0.77
VPS41-201ENST00000265745 GPRIN1Q7Z2K8 1008 aa10.27□□□□□ -0.77
VPS41-201ENST00000265745 C12orf40Q86WS4 652 aa10.27□□□□□ -0.77
VPS41-201ENST00000265745 SFTPA1Q8IWL2 248 aa10.27□□□□□ -0.77
VPS41-201ENST00000265745 BBS7Q8IWZ6 715 aa10.27□□□□□ -0.77
VPS41-201ENST00000265745 CCDC150Q8NCX0 1101 aa10.27□□□□□ -0.77
VPS41-201ENST00000265745 ENGASEQ8NFI3 743 aa10.27□□□□□ -0.77
VPS41-201ENST00000265745 SPATA20Q8TB22 786 aa10.27□□□□□ -0.77
VPS41-201ENST00000265745 WBP2Q969T9 261 aa10.27□□□□□ -0.77
VPS41-201ENST00000265745 FAXDC2Q96IV6 333 aa10.27□□□□□ -0.77
VPS41-201ENST00000265745 GSDMAQ96QA5 445 aa10.27□□□□□ -0.77
VPS41-201ENST00000265745 RTKNQ9BST9 563 aa10.27□□□□□ -0.77
VPS41-201ENST00000265745 KLF16Q9BXK1 252 aaPredicted RBP10.27□□□□□ -0.77
VPS41-201ENST00000265745 MMRN2Q9H8L6 949 aa10.27□□□□□ -0.77
VPS41-201ENST00000265745 PNPLA8Q9NP80 782 aa10.27□□□□□ -0.77
VPS41-201ENST00000265745 CYLDQ9NQC7 956 aa10.27□□□□□ -0.77
VPS41-201ENST00000265745 RMND1Q9NWS8 449 aa10.27□□□□□ -0.77
VPS41-201ENST00000265745 OSER1Q9NX31 292 aa10.27□□□□□ -0.77
VPS41-201ENST00000265745 PCDHGC3Q9UN70 934 aa10.27□□□□□ -0.77
VPS41-201ENST00000265745 SH3BP1Q9Y3L3 701 aa10.27□□□□□ -0.77
VPS41-201ENST00000265745 FANCMQ8IYD8 2048 aa10.27□□□□□ -0.77
VPS41-201ENST00000265745 PATJQ8NI35 1801 aa10.26□□□□□ -0.77
VPS41-201ENST00000265745 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.26□□□□□ -0.77
VPS41-201ENST00000265745 DCDC2BA2VCK2 349 aa10.26□□□□□ -0.77
VPS41-201ENST00000265745 GOLGA6L4A6NEF3 574 aa10.26□□□□□ -0.77
VPS41-201ENST00000265745 SLC30A4O14863 429 aa10.26□□□□□ -0.77
VPS41-201ENST00000265745 DCLK1O15075 740 aa10.26□□□□□ -0.77
VPS41-201ENST00000265745 HOXC11O43248 304 aaPredicted RBP10.26□□□□□ -0.77
VPS41-201ENST00000265745 GDF9O60383 454 aa10.26□□□□□ -0.77
VPS41-201ENST00000265745 ZNF806P0C7X5 589 aa10.26□□□□□ -0.77
VPS41-201ENST00000265745 EPB41P11171 864 aaKnown RBP10.26□□□□□ -0.77
VPS41-201ENST00000265745 ADH5P11766 374 aa10.26□□□□□ -0.77
VPS41-201ENST00000265745 ACO1P21399 889 aaKnown RBP10.26□□□□□ -0.77
VPS41-201ENST00000265745 ATP5C1P36542 298 aaKnown RBP10.26□□□□□ -0.77
VPS41-201ENST00000265745 KIR2DL1P43626 348 aaPredicted RBP10.26□□□□□ -0.77
VPS41-201ENST00000265745 DGKEP52429 567 aa10.26□□□□□ -0.77
VPS41-201ENST00000265745 KIF11P52732 1056 aa10.26□□□□□ -0.77
VPS41-201ENST00000265745 GAD2Q05329 585 aa10.26□□□□□ -0.77
VPS41-201ENST00000265745 COBLL1Q53SF7 1204 aa10.26□□□□□ -0.77
VPS41-201ENST00000265745 PLA2G2CQ5R387 149 aa10.26□□□□□ -0.77
VPS41-201ENST00000265745 ZNF658Q5TYW1 1059 aaPredicted RBP10.26□□□□□ -0.77
VPS41-201ENST00000265745 EMC10Q5UCC4 262 aa10.26□□□□□ -0.77
VPS41-201ENST00000265745 KLHDC10Q6PID8 442 aa10.26□□□□□ -0.77
VPS41-201ENST00000265745 RASSF3Q86WH2 238 aa10.26□□□□□ -0.77
VPS41-201ENST00000265745 TMEM25Q86YD3 366 aa10.26□□□□□ -0.77
VPS41-201ENST00000265745 ETFBKMTQ8IXQ9 262 aa10.26□□□□□ -0.77
VPS41-201ENST00000265745 PHTF2Q8N3S3 785 aa10.26□□□□□ -0.77
VPS41-201ENST00000265745 CCDC33Q8N5R6 958 aa10.26□□□□□ -0.77
VPS41-201ENST00000265745 IL17RCQ8NAC3 791 aa10.26□□□□□ -0.77
VPS41-201ENST00000265745 FBXL13Q8NEE6 735 aa10.26□□□□□ -0.77
VPS41-201ENST00000265745 TSTD1Q8NFU3 115 aa10.26□□□□□ -0.77
VPS41-201ENST00000265745 NETO1Q8TDF5 533 aa10.26□□□□□ -0.77
VPS41-201ENST00000265745 HEXIM2Q96MH2 286 aaKnown RBP10.26□□□□□ -0.77
VPS41-201ENST00000265745 DUSP16Q9BY84 665 aa10.26□□□□□ -0.77
VPS41-201ENST00000265745 NACA2Q9H009 215 aa10.26□□□□□ -0.77
VPS41-201ENST00000265745 DUSP15Q9H1R2 295 aaPredicted RBP10.26□□□□□ -0.77
VPS41-201ENST00000265745 ARRDC1-AS1Q9H2J1 176 aa10.26□□□□□ -0.77
VPS41-201ENST00000265745 ARHGEF4Q9NR80 690 aa10.26□□□□□ -0.77
VPS41-201ENST00000265745 SPHK2Q9NRA0 654 aa10.26□□□□□ -0.77
VPS41-201ENST00000265745 RAB20Q9NX57 234 aa10.26□□□□□ -0.77
VPS41-201ENST00000265745 MMP17Q9ULZ9 603 aa10.26□□□□□ -0.77
VPS41-201ENST00000265745 PCDHGA5Q9Y5G8 931 aa10.26□□□□□ -0.77
VPS41-201ENST00000265745 PCDHA5Q9Y5H7 936 aa10.26□□□□□ -0.77
VPS41-201ENST00000265745 USP3Q9Y6I4 520 aa10.26□□□□□ -0.77
VPS41-201ENST00000265745 SPTBN2O15020 2390 aa10.25□□□□□ -0.77
VPS41-201ENST00000265745 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.25□□□□□ -0.77
VPS41-201ENST00000265745 CYP26A1O43174 497 aa10.25□□□□□ -0.77
VPS41-201ENST00000265745 STX10O60499 249 aa10.25□□□□□ -0.77
VPS41-201ENST00000265745 EPN2O95208 641 aa10.25□□□□□ -0.77
VPS41-201ENST00000265745 APODP05090 189 aa10.25□□□□□ -0.77
VPS41-201ENST00000265745 HNRNPLP14866 589 aaKnown RBP eCLIP10.25□□□□□ -0.77
VPS41-201ENST00000265745 TNFRSF4P43489 277 aa10.25□□□□□ -0.77
VPS41-201ENST00000265745 MXI1P50539 228 aa10.25□□□□□ -0.77
VPS41-201ENST00000265745 PMS1P54277 932 aaKnown RBP10.25□□□□□ -0.77
VPS41-201ENST00000265745 RAD23BP54727 409 aa10.25□□□□□ -0.77
VPS41-201ENST00000265745 NUCB2P80303 420 aa10.25□□□□□ -0.77
VPS41-201ENST00000265745 FKBP3Q00688 224 aaKnown RBP10.25□□□□□ -0.77
VPS41-201ENST00000265745 GUCA2AQ02747 115 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms