RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 STXBP2Q15833 593 aa12.87□□□□□ -0.35
CHMP3-201ENST00000263856 LGSNQ5TDP6 509 aa12.87□□□□□ -0.35
CHMP3-201ENST00000263856 FAM83AQ86UY5 434 aa12.87□□□□□ -0.35
CHMP3-201ENST00000263856 MAGEB5Q9BZ81 275 aa12.87□□□□□ -0.35
CHMP3-201ENST00000263856 TLE6Q9H808 572 aa12.87□□□□□ -0.35
CHMP3-201ENST00000263856 ACSS2Q9NR19 701 aa12.87□□□□□ -0.35
CHMP3-201ENST00000263856 STX18Q9P2W9 335 aaKnown RBP12.87□□□□□ -0.35
CHMP3-201ENST00000263856 PPM1HQ9ULR3 514 aa12.87□□□□□ -0.35
CHMP3-201ENST00000263856 OGTO15294 1046 aa12.86□□□□□ -0.35
CHMP3-201ENST00000263856 MED7O43513 233 aa12.86□□□□□ -0.35
CHMP3-201ENST00000263856 NFICP08651 508 aa12.86□□□□□ -0.35
CHMP3-201ENST00000263856 ANPEPP15144 967 aa12.86□□□□□ -0.35
CHMP3-201ENST00000263856 TCF7P36402 384 aaPredicted RBP12.86□□□□□ -0.35
CHMP3-201ENST00000263856 ATXN3P54252 364 aaPredicted RBP12.86□□□□□ -0.35
CHMP3-201ENST00000263856 STX3Q13277 289 aa12.86□□□□□ -0.35
CHMP3-201ENST00000263856 CES4AQ5XG92 561 aa12.86□□□□□ -0.35
CHMP3-201ENST00000263856 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.86□□□□□ -0.35
CHMP3-201ENST00000263856 GMLQ99445 158 aa12.86□□□□□ -0.35
CHMP3-201ENST00000263856 PDGFDQ9GZP0 370 aaPredicted RBP12.86□□□□□ -0.35
CHMP3-201ENST00000263856 KLC2Q9H0B6 622 aa12.86□□□□□ -0.35
CHMP3-201ENST00000263856 RSAD1Q9HA92 442 aa12.86□□□□□ -0.35
CHMP3-201ENST00000263856 NRBP2Q9NSY0 501 aa12.86□□□□□ -0.35
CHMP3-201ENST00000263856 FAM49BQ9NUQ9 324 aa12.86□□□□□ -0.35
CHMP3-201ENST00000263856 ASNSD1Q9NWL6 643 aa12.86□□□□□ -0.35
CHMP3-201ENST00000263856 TEX264Q9Y6I9 313 aa12.86□□□□□ -0.35
CHMP3-201ENST00000263856 STK10O94804 968 aaKnown RBP12.86□□□□□ -0.35
CHMP3-201ENST00000263856 ARL2P36404 184 aa12.86□□□□□ -0.35
CHMP3-201ENST00000263856 SESN2P58004 480 aaPredicted RBP12.86□□□□□ -0.35
CHMP3-201ENST00000263856 MRPS5P82675 430 aaKnown RBP12.86□□□□□ -0.35
CHMP3-201ENST00000263856 AP1B1Q10567 949 aa12.86□□□□□ -0.35
CHMP3-201ENST00000263856 LY6KQ17RY6 165 aa12.86□□□□□ -0.35
CHMP3-201ENST00000263856 DENND5BQ6ZUT9 1274 aa12.86□□□□□ -0.35
CHMP3-201ENST00000263856 TMPRSS6Q8IU80 811 aa12.86□□□□□ -0.35
CHMP3-201ENST00000263856 C12orf29Q8N999 325 aa12.86□□□□□ -0.35
CHMP3-201ENST00000263856 PGLYRP2Q96PD5 576 aa12.86□□□□□ -0.35
CHMP3-201ENST00000263856 DHRS4Q9BTZ2 278 aa12.86□□□□□ -0.35
CHMP3-201ENST00000263856 SDCBP2Q9H190 292 aa12.86□□□□□ -0.35
CHMP3-201ENST00000263856 SSU72Q9NP77 194 aaKnown RBP12.86□□□□□ -0.35
CHMP3-201ENST00000263856 SEPT10Q9P0V9 454 aa12.86□□□□□ -0.35
CHMP3-201ENST00000263856 SLC7A8Q9UHI5 535 aa12.86□□□□□ -0.35
CHMP3-201ENST00000263856 DNAJC16Q9Y2G8 782 aa12.86□□□□□ -0.35
CHMP3-201ENST00000263856 TTLL3Q9Y4R7 772 aa12.86□□□□□ -0.35
CHMP3-201ENST00000263856 WDR81Q562E7 1941 aa12.86□□□□□ -0.35
CHMP3-201ENST00000263856 MAFGO15525 162 aa12.85□□□□□ -0.35
CHMP3-201ENST00000263856 AP2B1P63010 937 aa12.85□□□□□ -0.35
CHMP3-201ENST00000263856 PTPN11Q06124 597 aaPredicted RBP12.85□□□□□ -0.35
CHMP3-201ENST00000263856 RALGPS1Q5JS13 557 aa12.85□□□□□ -0.35
CHMP3-201ENST00000263856 TCHHL1Q5QJ38 904 aaPredicted RBP12.85□□□□□ -0.35
CHMP3-201ENST00000263856 VWA5B1Q5TIE3 1220 aa12.85□□□□□ -0.35
CHMP3-201ENST00000263856 LPCAT4Q643R3 524 aa12.85□□□□□ -0.35
CHMP3-201ENST00000263856 CES3Q6UWW8 571 aa12.85□□□□□ -0.35
CHMP3-201ENST00000263856 ZNF518BQ9C0D4 1074 aa12.85□□□□□ -0.35
CHMP3-201ENST00000263856 ARHGEF4Q9NR80 690 aa12.85□□□□□ -0.35
CHMP3-201ENST00000263856 CNTN6Q9UQ52 1028 aa12.85□□□□□ -0.35
CHMP3-201ENST00000263856 GINS2Q9Y248 185 aa12.85□□□□□ -0.35
CHMP3-201ENST00000263856 STYXL1Q9Y6J8 313 aa12.85□□□□□ -0.35
CHMP3-201ENST00000263856 E7ESA3 106 aa12.85□□□□□ -0.35
CHMP3-201ENST00000263856 SMAPO00193 183 aa12.85□□□□□ -0.35
CHMP3-201ENST00000263856 NOP56O00567 594 aaKnown RBP12.85□□□□□ -0.35
CHMP3-201ENST00000263856 KRT38O76015 456 aa12.85□□□□□ -0.35
CHMP3-201ENST00000263856 SNUPNO95149 360 aaKnown RBP12.85□□□□□ -0.35
CHMP3-201ENST00000263856 GPD1P21695 349 aa12.85□□□□□ -0.35
CHMP3-201ENST00000263856 CLCN3P51790 818 aa12.85□□□□□ -0.35
CHMP3-201ENST00000263856 BACE1P56817 501 aa12.85□□□□□ -0.35
CHMP3-201ENST00000263856 DSG1Q02413 1049 aa12.85□□□□□ -0.35
CHMP3-201ENST00000263856 LAMTOR4Q0VGL1 99 aa12.85□□□□□ -0.35
CHMP3-201ENST00000263856 PPP2R5DQ14738 602 aa12.85□□□□□ -0.35
CHMP3-201ENST00000263856 RAPH1Q70E73 1250 aa12.85□□□□□ -0.35
CHMP3-201ENST00000263856 RPF1Q9H9Y2 349 aaKnown RBP12.85□□□□□ -0.35
CHMP3-201ENST00000263856 MAP3K20Q9NYL2 800 aaKnown RBP12.85□□□□□ -0.35
CHMP3-201ENST00000263856 TAGLN3Q9UI15 199 aa12.85□□□□□ -0.35
CHMP3-201ENST00000263856 PLLPQ9Y342 182 aa12.85□□□□□ -0.35
CHMP3-201ENST00000263856 AFG3L2Q9Y4W6 797 aa12.85□□□□□ -0.35
CHMP3-201ENST00000263856 ADGRA2Q96PE1 1338 aa12.85□□□□□ -0.35
CHMP3-201ENST00000263856 MAGEA13PA6NCF6 341 aa12.85□□□□□ -0.35
CHMP3-201ENST00000263856 SPATA31C2B4DYI2 1134 aa12.85□□□□□ -0.35
CHMP3-201ENST00000263856 UBA1P22314 1058 aaKnown RBP12.85□□□□□ -0.35
CHMP3-201ENST00000263856 ABCG1P45844 678 aa12.85□□□□□ -0.35
CHMP3-201ENST00000263856 CA9Q16790 459 aa12.85□□□□□ -0.35
CHMP3-201ENST00000263856 CCDC142Q17RM4 750 aa12.85□□□□□ -0.35
CHMP3-201ENST00000263856 RASSF3Q86WH2 238 aa12.85□□□□□ -0.35
CHMP3-201ENST00000263856 CHSY1Q86X52 802 aa12.85□□□□□ -0.35
CHMP3-201ENST00000263856 FAM136AQ96C01 138 aa12.85□□□□□ -0.35
CHMP3-201ENST00000263856 TUBGCP5Q96RT8 1024 aa12.85□□□□□ -0.35
CHMP3-201ENST00000263856 TEX13BQ9BXU2 312 aa12.85□□□□□ -0.35
CHMP3-201ENST00000263856 ELOVL4Q9GZR5 314 aa12.85□□□□□ -0.35
CHMP3-201ENST00000263856 DHX35Q9H5Z1 703 aaKnown RBP12.85□□□□□ -0.35
CHMP3-201ENST00000263856 ZNF214Q9UL59 606 aaPredicted RBP12.85□□□□□ -0.35
CHMP3-201ENST00000263856 APOL1O14791 398 aa12.84□□□□□ -0.35
CHMP3-201ENST00000263856 ITM2AO43736 263 aa12.84□□□□□ -0.35
CHMP3-201ENST00000263856 AHCYL1O43865 530 aa12.84□□□□□ -0.35
CHMP3-201ENST00000263856 ATXN1P54253 815 aaKnown RBP12.84□□□□□ -0.35
CHMP3-201ENST00000263856 PDE1BQ01064 536 aa12.84□□□□□ -0.35
CHMP3-201ENST00000263856 TFDP2Q14188 446 aa12.84□□□□□ -0.35
CHMP3-201ENST00000263856 HIC1Q14526 733 aa12.84□□□□□ -0.35
CHMP3-201ENST00000263856 KCNJ11Q14654 390 aa12.84□□□□□ -0.35
CHMP3-201ENST00000263856 NOMO1Q15155 1222 aa12.84□□□□□ -0.35
CHMP3-201ENST00000263856 UNC5AQ6ZN44 842 aa12.84□□□□□ -0.35
CHMP3-201ENST00000263856 FAM183BPQ6ZVS7 135 aa12.84□□□□□ -0.35
CHMP3-201ENST00000263856 NCAPG2Q86XI2 1143 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms