RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 HSDL1Q3SXM5 330 aa16.78■□□□□ 0.28
PDZRN3-201ENST00000263666 CRELD2Q6UXH1 353 aaPredicted RBP16.78■□□□□ 0.28
PDZRN3-201ENST00000263666 GALNT4Q8N4A0 578 aa16.78■□□□□ 0.28
PDZRN3-201ENST00000263666 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.78■□□□□ 0.28
PDZRN3-201ENST00000263666 ZNF669Q96BR6 464 aaPredicted RBP16.78■□□□□ 0.28
PDZRN3-201ENST00000263666 CCNHP51946 323 aaPredicted RBP16.78■□□□□ 0.28
PDZRN3-201ENST00000263666 RNASEH2BQ5TBB1 312 aaKnown RBP16.78■□□□□ 0.28
PDZRN3-201ENST00000263666 EMC10Q5UCC4 262 aa16.78■□□□□ 0.28
PDZRN3-201ENST00000263666 MPZL3Q6UWV2 235 aa16.78■□□□□ 0.28
PDZRN3-201ENST00000263666 RDM1Q8NG50 284 aa16.78■□□□□ 0.28
PDZRN3-201ENST00000263666 UPF1Q92900 1129 aaKnown RBP eCLIP16.78■□□□□ 0.28
PDZRN3-201ENST00000263666 PRR11Q96HE9 360 aaPredicted RBP16.78■□□□□ 0.28
PDZRN3-201ENST00000263666 TMEM176AQ96HP8 235 aa16.78■□□□□ 0.28
PDZRN3-201ENST00000263666 VCPIP1Q96JH7 1222 aa16.78■□□□□ 0.28
PDZRN3-201ENST00000263666 ERBB2P04626 1255 aa16.78■□□□□ 0.28
PDZRN3-201ENST00000263666 CYP1A1P04798 512 aaPredicted RBP16.78■□□□□ 0.28
PDZRN3-201ENST00000263666 AVPR1AP37288 418 aa16.78■□□□□ 0.28
PDZRN3-201ENST00000263666 MLH1P40692 756 aa16.78■□□□□ 0.28
PDZRN3-201ENST00000263666 GARSP41250 739 aaKnown RBP16.78■□□□□ 0.28
PDZRN3-201ENST00000263666 MXD4Q14582 209 aaPredicted RBP16.78■□□□□ 0.28
PDZRN3-201ENST00000263666 IER5Q5VY09 327 aa16.78■□□□□ 0.28
PDZRN3-201ENST00000263666 SLC30A9Q6PML9 568 aa16.78■□□□□ 0.28
PDZRN3-201ENST00000263666 GSDMBQ8TAX9 411 aa16.78■□□□□ 0.28
PDZRN3-201ENST00000263666 FAM167AQ96KS9 214 aa16.78■□□□□ 0.28
PDZRN3-201ENST00000263666 LPIN3Q9BQK8 851 aa16.78■□□□□ 0.28
PDZRN3-201ENST00000263666 NENFQ9UMX5 172 aa16.78■□□□□ 0.28
PDZRN3-201ENST00000263666 WDR27A2RRH5 827 aa16.77■□□□□ 0.28
PDZRN3-201ENST00000263666 ZNF286BP0CG31 522 aa16.77■□□□□ 0.28
PDZRN3-201ENST00000263666 SH2D4BQ5SQS7 431 aa16.77■□□□□ 0.28
PDZRN3-201ENST00000263666 SCUBE1Q8IWY4 988 aa16.77■□□□□ 0.28
PDZRN3-201ENST00000263666 PTPRN2Q92932 1015 aa16.77■□□□□ 0.28
PDZRN3-201ENST00000263666 SERAC1Q96JX3 654 aa16.77■□□□□ 0.28
PDZRN3-201ENST00000263666 C2orf40Q9H1Z8 148 aa16.77■□□□□ 0.28
PDZRN3-201ENST00000263666 RGS17Q9UGC6 210 aaPredicted RBP16.77■□□□□ 0.28
PDZRN3-201ENST00000263666 TNPO2O14787 897 aaKnown RBP16.77■□□□□ 0.28
PDZRN3-201ENST00000263666 ATP6V1B1P15313 513 aa16.77■□□□□ 0.28
PDZRN3-201ENST00000263666 SERPINB5P36952 375 aa16.77■□□□□ 0.28
PDZRN3-201ENST00000263666 RAB6CQ53S08 254 aa16.77■□□□□ 0.28
PDZRN3-201ENST00000263666 TAS1R3Q7RTX0 852 aa16.77■□□□□ 0.28
PDZRN3-201ENST00000263666 UNC5BQ8IZJ1 945 aa16.77■□□□□ 0.28
PDZRN3-201ENST00000263666 NDRG1Q92597 394 aaKnown RBP16.77■□□□□ 0.28
PDZRN3-201ENST00000263666 RAB6CQ9H0N0 254 aa16.77■□□□□ 0.28
PDZRN3-201ENST00000263666 ARHGEF3Q9NR81 526 aa16.77■□□□□ 0.28
PDZRN3-201ENST00000263666 RPS6KL1Q9Y6S9 549 aa16.77■□□□□ 0.28
PDZRN3-201ENST00000263666 WASF2Q9Y6W5 498 aa16.77■□□□□ 0.28
PDZRN3-201ENST00000263666 TPH1P17752 444 aa16.77■□□□□ 0.27
PDZRN3-201ENST00000263666 SNX16P57768 344 aa16.77■□□□□ 0.27
PDZRN3-201ENST00000263666 COG7P83436 770 aa16.77■□□□□ 0.27
PDZRN3-201ENST00000263666 ITGA9Q13797 1035 aa16.77■□□□□ 0.27
PDZRN3-201ENST00000263666 ABHD15Q6UXT9 468 aa16.77■□□□□ 0.27
PDZRN3-201ENST00000263666 GPRC5AQ8NFJ5 357 aa16.77■□□□□ 0.27
PDZRN3-201ENST00000263666 CDCA5Q96FF9 252 aa16.77■□□□□ 0.27
PDZRN3-201ENST00000263666 GBA2Q9HCG7 927 aaPredicted RBP16.77■□□□□ 0.27
PDZRN3-201ENST00000263666 PPP2R3BQ9Y5P8 575 aa16.77■□□□□ 0.27
PDZRN3-201ENST00000263666 NPM3O75607 178 aaKnown RBP16.76■□□□□ 0.27
PDZRN3-201ENST00000263666 RARBP10826 455 aa16.76■□□□□ 0.27
PDZRN3-201ENST00000263666 ABCD1P33897 745 aa16.76■□□□□ 0.27
PDZRN3-201ENST00000263666 ATXN1P54253 815 aaKnown RBP16.76■□□□□ 0.27
PDZRN3-201ENST00000263666 APOPT1Q96IL0 206 aa16.76■□□□□ 0.27
PDZRN3-201ENST00000263666 ACSS3Q9H6R3 686 aa16.76■□□□□ 0.27
PDZRN3-201ENST00000263666 GPBP1L1Q9HC44 474 aaPredicted RBP16.76■□□□□ 0.27
PDZRN3-201ENST00000263666 ANLNQ9NQW6 1124 aa16.76■□□□□ 0.27
PDZRN3-201ENST00000263666 GTSE1Q9NYZ3 720 aa16.76■□□□□ 0.27
PDZRN3-201ENST00000263666 WDR35Q9P2L0 1181 aa16.76■□□□□ 0.27
PDZRN3-201ENST00000263666 LYPLA2O95372 231 aa16.76■□□□□ 0.27
PDZRN3-201ENST00000263666 SRGAP2BP0DMP2 458 aa16.76■□□□□ 0.27
PDZRN3-201ENST00000263666 CYP2B6P20813 491 aa16.76■□□□□ 0.27
PDZRN3-201ENST00000263666 CDK16Q00536 496 aa16.76■□□□□ 0.27
PDZRN3-201ENST00000263666 LRRC74BQ6ZQY2 392 aa16.76■□□□□ 0.27
PDZRN3-201ENST00000263666 TEX2Q8IWB9 1127 aa16.76■□□□□ 0.27
PDZRN3-201ENST00000263666 CHST13Q8NET6 341 aa16.76■□□□□ 0.27
PDZRN3-201ENST00000263666 STIP1P31948 543 aaKnown RBP16.76■□□□□ 0.27
PDZRN3-201ENST00000263666 GPX6P59796 221 aa16.76■□□□□ 0.27
PDZRN3-201ENST00000263666 CACNB2Q08289 660 aaPredicted RBP16.76■□□□□ 0.27
PDZRN3-201ENST00000263666 ART3Q13508 389 aa16.76■□□□□ 0.27
PDZRN3-201ENST00000263666 N4BP2L1Q5TBK1 243 aaPredicted RBP16.76■□□□□ 0.27
PDZRN3-201ENST00000263666 LAYNQ6UX15 382 aa16.76■□□□□ 0.27
PDZRN3-201ENST00000263666 TMA16Q96EY4 203 aaKnown RBP16.76■□□□□ 0.27
PDZRN3-201ENST00000263666 CNPY3Q9BT09 278 aa16.76■□□□□ 0.27
PDZRN3-201ENST00000263666 RABGEF1Q9UJ41 708 aa16.76■□□□□ 0.27
PDZRN3-201ENST00000263666 IRF6O14896 467 aa16.75■□□□□ 0.27
PDZRN3-201ENST00000263666 SULT1E1P49888 294 aa16.75■□□□□ 0.27
PDZRN3-201ENST00000263666 GSCP56915 257 aaPredicted RBP16.75■□□□□ 0.27
PDZRN3-201ENST00000263666 FASTKD1Q53R41 847 aaKnown RBP16.75■□□□□ 0.27
PDZRN3-201ENST00000263666 SLC45A4Q5BKX6 768 aa16.75■□□□□ 0.27
PDZRN3-201ENST00000263666 RNF220Q5VTB9 566 aa16.75■□□□□ 0.27
PDZRN3-201ENST00000263666 SPATA24Q86W54 205 aa16.75■□□□□ 0.27
PDZRN3-201ENST00000263666 CDKL3Q8IVW4 592 aaPredicted RBP16.75■□□□□ 0.27
PDZRN3-201ENST00000263666 UCMAQ8WVF2 138 aa16.75■□□□□ 0.27
PDZRN3-201ENST00000263666 NMRK1Q9NWW6 199 aa16.75■□□□□ 0.27
PDZRN3-201ENST00000263666 APOC4-APOC2K7ER74 178 aa16.75■□□□□ 0.27
PDZRN3-201ENST00000263666 APOC2P02655 101 aa16.75■□□□□ 0.27
PDZRN3-201ENST00000263666 ACAT1P24752 427 aaKnown RBP16.75■□□□□ 0.27
PDZRN3-201ENST00000263666 CYP2F1P24903 491 aa16.75■□□□□ 0.27
PDZRN3-201ENST00000263666 AP3M2P53677 418 aa16.75■□□□□ 0.27
PDZRN3-201ENST00000263666 RHBDF2Q6PJF5 856 aa16.75■□□□□ 0.27
PDZRN3-201ENST00000263666 KCNT2Q6UVM3 1135 aa16.75■□□□□ 0.27
PDZRN3-201ENST00000263666 DPP3Q9NY33 737 aa16.75■□□□□ 0.27
PDZRN3-201ENST00000263666 ADA2Q9NZK5 511 aa16.75■□□□□ 0.27
PDZRN3-201ENST00000263666 DPPA5A6NC42 116 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms