RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 GSTA5Q7RTV2 222 aa23.32■■□□□ 1.32
SIX3-201ENST00000260653 CCDC185Q8N715 623 aa23.32■■□□□ 1.32
SIX3-201ENST00000260653 GPR62Q9BZJ7 368 aa23.32■■□□□ 1.32
SIX3-201ENST00000260653 NAALADL1Q9UQQ1 740 aa23.32■■□□□ 1.32
SIX3-201ENST00000260653 AGPSO00116 658 aa23.31■■□□□ 1.32
SIX3-201ENST00000260653 HOXA2O43364 376 aa23.31■■□□□ 1.32
SIX3-201ENST00000260653 ZBED1O96006 694 aa23.31■■□□□ 1.32
SIX3-201ENST00000260653 IL4RP24394 825 aa23.31■■□□□ 1.32
SIX3-201ENST00000260653 PDK2Q15119 407 aa23.31■■□□□ 1.32
SIX3-201ENST00000260653 ERMARDQ5T6L9 678 aa23.31■■□□□ 1.32
SIX3-201ENST00000260653 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.31■■□□□ 1.32
SIX3-201ENST00000260653 TMC3Q7Z5M5 1100 aa23.31■■□□□ 1.32
SIX3-201ENST00000260653 FAM131BQ86XD5 332 aa23.31■■□□□ 1.32
SIX3-201ENST00000260653 CEP57Q86XR8 500 aa23.31■■□□□ 1.32
SIX3-201ENST00000260653 SPATA2LQ8IUW3 424 aaPredicted RBP23.31■■□□□ 1.32
SIX3-201ENST00000260653 NT5C3BQ969T7 300 aa23.31■■□□□ 1.32
SIX3-201ENST00000260653 MAGEB5Q9BZ81 275 aa23.31■■□□□ 1.32
SIX3-201ENST00000260653 SYNJ2BP-COX16A0A087WUM0 186 aa23.31■■□□□ 1.32
SIX3-201ENST00000260653 PECAM1P16284 738 aaPredicted RBP23.31■■□□□ 1.32
SIX3-201ENST00000260653 IVDP26440 423 aa23.31■■□□□ 1.32
SIX3-201ENST00000260653 OAS2P29728 719 aaKnown RBP23.31■■□□□ 1.32
SIX3-201ENST00000260653 GGCXP38435 758 aa23.31■■□□□ 1.32
SIX3-201ENST00000260653 VARS2Q5ST30 1063 aaKnown RBP23.31■■□□□ 1.32
SIX3-201ENST00000260653 FAM171A1Q5VUB5 890 aa23.31■■□□□ 1.32
SIX3-201ENST00000260653 ZNF365Q70YC5 407 aa23.31■■□□□ 1.32
SIX3-201ENST00000260653 BHLHA9Q7RTU4 235 aa23.31■■□□□ 1.32
SIX3-201ENST00000260653 MAP7D3Q8IWC1 876 aa23.31■■□□□ 1.32
SIX3-201ENST00000260653 GLIS1Q8NBF1 620 aa23.31■■□□□ 1.32
SIX3-201ENST00000260653 SLC35B2Q8TB61 432 aa23.31■■□□□ 1.32
SIX3-201ENST00000260653 NKD2Q969F2 451 aaPredicted RBP23.31■■□□□ 1.32
SIX3-201ENST00000260653 NPY6RQ99463 290 aa23.31■■□□□ 1.32
SIX3-201ENST00000260653 TMEM39AQ9NV64 488 aa23.31■■□□□ 1.32
SIX3-201ENST00000260653 COX16Q9P0S2 106 aa23.31■■□□□ 1.32
SIX3-201ENST00000260653 NT5C1B-RDH14C9J2C7 533 aa23.3■■□□□ 1.32
SIX3-201ENST00000260653 TP73O15350 636 aa23.3■■□□□ 1.32
SIX3-201ENST00000260653 CYP2F1P24903 491 aa23.3■■□□□ 1.32
SIX3-201ENST00000260653 GPS2Q13227 327 aa23.3■■□□□ 1.32
SIX3-201ENST00000260653 PPP6R3Q5H9R7 873 aaPredicted RBP23.3■■□□□ 1.32
SIX3-201ENST00000260653 C4orf50Q6ZRC1 276 aa23.3■■□□□ 1.32
SIX3-201ENST00000260653 FAM43BQ6ZT52 329 aaPredicted RBP23.3■■□□□ 1.32
SIX3-201ENST00000260653 RIN2Q8WYP3 895 aaPredicted RBP23.3■■□□□ 1.32
SIX3-201ENST00000260653 VWCEQ96DN2 955 aa23.3■■□□□ 1.32
SIX3-201ENST00000260653 ZCWPW1Q9H0M4 648 aa23.3■■□□□ 1.32
SIX3-201ENST00000260653 AP4E1Q9UPM8 1137 aa23.3■■□□□ 1.32
SIX3-201ENST00000260653 APOC4-APOC2K7ER74 178 aa23.3■■□□□ 1.32
SIX3-201ENST00000260653 SYN3O14994 580 aa23.3■■□□□ 1.32
SIX3-201ENST00000260653 UPP2O95045 317 aa23.3■■□□□ 1.32
SIX3-201ENST00000260653 APOC2P02655 101 aa23.3■■□□□ 1.32
SIX3-201ENST00000260653 ALDH2P05091 517 aa23.3■■□□□ 1.32
SIX3-201ENST00000260653 GBP1P32455 592 aa23.3■■□□□ 1.32
SIX3-201ENST00000260653 TMEM173Q86WV6 379 aaPredicted RBP23.3■■□□□ 1.32
SIX3-201ENST00000260653 ART4Q93070 314 aa23.3■■□□□ 1.32
SIX3-201ENST00000260653 ARMC5Q96C12 935 aa23.3■■□□□ 1.32
SIX3-201ENST00000260653 RNF157Q96PX1 679 aa23.3■■□□□ 1.32
SIX3-201ENST00000260653 TMEM121Q9BTD3 319 aa23.3■■□□□ 1.32
SIX3-201ENST00000260653 MAK16Q9BXY0 300 aaKnown RBP23.3■■□□□ 1.32
SIX3-201ENST00000260653 MRPL9Q9BYD2 267 aaKnown RBP23.3■■□□□ 1.32
SIX3-201ENST00000260653 DHX35Q9H5Z1 703 aaKnown RBP23.3■■□□□ 1.32
SIX3-201ENST00000260653 STAP1Q9ULZ2 295 aa23.3■■□□□ 1.32
SIX3-201ENST00000260653 FAN1Q9Y2M0 1017 aa23.3■■□□□ 1.32
SIX3-201ENST00000260653 M0QYT0 321 aa23.29■■□□□ 1.32
SIX3-201ENST00000260653 CAPN9O14815 690 aa23.29■■□□□ 1.32
SIX3-201ENST00000260653 KRT14P02533 472 aa23.29■■□□□ 1.32
SIX3-201ENST00000260653 LTFP02788 710 aa23.29■■□□□ 1.32
SIX3-201ENST00000260653 KLRC2P26717 231 aa23.29■■□□□ 1.32
SIX3-201ENST00000260653 GJA8P48165 433 aa23.29■■□□□ 1.32
SIX3-201ENST00000260653 LMNB2Q03252 620 aa23.29■■□□□ 1.32
SIX3-201ENST00000260653 DHX9Q08211 1270 aaKnown RBP23.29■■□□□ 1.32
SIX3-201ENST00000260653 NPNTQ6UXI9 565 aa23.29■■□□□ 1.32
SIX3-201ENST00000260653 BNIPLQ7Z465 357 aa23.29■■□□□ 1.32
SIX3-201ENST00000260653 ALLCQ8N6M5 410 aa23.29■■□□□ 1.32
SIX3-201ENST00000260653 TTC13Q8NBP0 860 aa23.29■■□□□ 1.32
SIX3-201ENST00000260653 PIK3R5Q8WYR1 880 aa23.29■■□□□ 1.32
SIX3-201ENST00000260653 SNF8Q96H20 258 aa23.29■■□□□ 1.32
SIX3-201ENST00000260653 PAWRQ96IZ0 340 aaKnown RBP23.29■■□□□ 1.32
SIX3-201ENST00000260653 C10orf88Q9H8K7 445 aa23.29■■□□□ 1.32
SIX3-201ENST00000260653 ABI2Q9NYB9 513 aaPredicted RBP23.29■■□□□ 1.32
SIX3-201ENST00000260653 PATJQ8NI35 1801 aa23.29■■□□□ 1.32
SIX3-201ENST00000260653 ATF2P15336 505 aa23.29■■□□□ 1.32
SIX3-201ENST00000260653 CALCOCO2Q13137 446 aa23.29■■□□□ 1.32
SIX3-201ENST00000260653 UAP1Q16222 522 aaPredicted RBP23.29■■□□□ 1.32
SIX3-201ENST00000260653 DPYSL2Q16555 572 aa23.29■■□□□ 1.32
SIX3-201ENST00000260653 SCAMP5Q8TAC9 235 aa23.29■■□□□ 1.32
SIX3-201ENST00000260653 LRRC45Q96CN5 670 aa23.29■■□□□ 1.32
SIX3-201ENST00000260653 COLEC11Q9BWP8 271 aa23.29■■□□□ 1.32
SIX3-201ENST00000260653 WHRNQ9P202 907 aa23.29■■□□□ 1.32
SIX3-201ENST00000260653 DRG1Q9Y295 367 aaKnown RBP23.29■■□□□ 1.32
SIX3-201ENST00000260653 ITGAVP06756 1048 aa23.28■■□□□ 1.32
SIX3-201ENST00000260653 L1CAMP32004 1257 aa23.28■■□□□ 1.32
SIX3-201ENST00000260653 HSD17B3P37058 310 aa23.28■■□□□ 1.32
SIX3-201ENST00000260653 ADCY8P40145 1251 aa23.28■■□□□ 1.32
SIX3-201ENST00000260653 NME3Q13232 169 aa23.28■■□□□ 1.32
SIX3-201ENST00000260653 ANKRD20A8PQ5CZ79 823 aa23.28■■□□□ 1.32
SIX3-201ENST00000260653 ADAM32Q8TC27 787 aa23.28■■□□□ 1.32
SIX3-201ENST00000260653 ZIM3Q96PE6 472 aa23.28■■□□□ 1.32
SIX3-201ENST00000260653 MTMR10Q9NXD2 777 aa23.28■■□□□ 1.32
SIX3-201ENST00000260653 PCDH10Q9P2E7 1040 aa23.28■■□□□ 1.32
SIX3-201ENST00000260653 SYF2O95926 243 aaKnown RBP23.28■■□□□ 1.32
SIX3-201ENST00000260653 GALTP07902 379 aa23.28■■□□□ 1.32
SIX3-201ENST00000260653 CLTBP09497 229 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms