RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 RXFP2Q8WXD0 754 aa16.33■□□□□ 0.2
GYPC-201ENST00000259254 EDEM1Q92611 657 aa16.33■□□□□ 0.2
GYPC-201ENST00000259254 C16orf45Q96MC5 204 aaPredicted RBP16.33■□□□□ 0.2
GYPC-201ENST00000259254 TTLL2Q9BWV7 592 aa16.33■□□□□ 0.2
GYPC-201ENST00000259254 POPDC2Q9HBU9 364 aa16.33■□□□□ 0.2
GYPC-201ENST00000259254 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.33■□□□□ 0.2
GYPC-201ENST00000259254 IP6K2Q9UHH9 426 aa16.33■□□□□ 0.2
GYPC-201ENST00000259254 LCMT1Q9UIC8 334 aa16.33■□□□□ 0.2
GYPC-201ENST00000259254 TMEM59LQ9UK28 342 aa16.33■□□□□ 0.2
GYPC-201ENST00000259254 USTQ9Y2C2 406 aa16.33■□□□□ 0.2
GYPC-201ENST00000259254 ASB3Q9Y575 518 aa16.33■□□□□ 0.2
GYPC-201ENST00000259254 GRID2IPA4D2P6 1211 aa16.32■□□□□ 0.2
GYPC-201ENST00000259254 RFPL2O75678 378 aa16.32■□□□□ 0.2
GYPC-201ENST00000259254 NCAM1P13591 858 aa16.32■□□□□ 0.2
GYPC-201ENST00000259254 SSR1P43307 286 aaKnown RBP16.32■□□□□ 0.2
GYPC-201ENST00000259254 MYO7AQ13402 2215 aa16.32■□□□□ 0.2
GYPC-201ENST00000259254 DCAF6Q58WW2 860 aa16.32■□□□□ 0.2
GYPC-201ENST00000259254 RSRC2Q7L4I2 434 aaKnown RBP16.32■□□□□ 0.2
GYPC-201ENST00000259254 MON1AQ86VX9 555 aa16.32■□□□□ 0.2
GYPC-201ENST00000259254 SYCE1Q8N0S2 351 aa16.32■□□□□ 0.2
GYPC-201ENST00000259254 PDZD8Q8NEN9 1154 aa16.32■□□□□ 0.2
GYPC-201ENST00000259254 TRIM58Q8NG06 486 aa16.32■□□□□ 0.2
GYPC-201ENST00000259254 RNF139Q8WU17 664 aa16.32■□□□□ 0.2
GYPC-201ENST00000259254 KHSRPQ92945 711 aaKnown RBP eCLIP16.32■□□□□ 0.22e-7■■■■□ 24.2
GYPC-201ENST00000259254 PSMG2Q969U7 264 aa16.32■□□□□ 0.2
GYPC-201ENST00000259254 TTC28Q96AY4 2481 aa16.32■□□□□ 0.2
GYPC-201ENST00000259254 NMUR1Q9HB89 426 aa16.32■□□□□ 0.2
GYPC-201ENST00000259254 TLR8Q9NR97 1041 aaKnown RBP16.32■□□□□ 0.2
GYPC-201ENST00000259254 IL37Q9NZH6 218 aa16.32■□□□□ 0.2
GYPC-201ENST00000259254 UXTQ9UBK9 157 aaPredicted RBP16.32■□□□□ 0.2
GYPC-201ENST00000259254 STAP1Q9ULZ2 295 aa16.32■□□□□ 0.2
GYPC-201ENST00000259254 FAM92AA1XBS5 289 aa16.31■□□□□ 0.2
GYPC-201ENST00000259254 C2CD4BA6NLJ0 364 aa16.31■□□□□ 0.2
GYPC-201ENST00000259254 SPOPO43791 374 aa16.31■□□□□ 0.2
GYPC-201ENST00000259254 XYLBO75191 536 aa16.31■□□□□ 0.2
GYPC-201ENST00000259254 PROSCO94903 275 aa16.31■□□□□ 0.2
GYPC-201ENST00000259254 HNRNPA1P09651 372 aaKnown RBP eCLIP16.31■□□□□ 0.2
GYPC-201ENST00000259254 SRGAP2BP0DMP2 458 aa16.31■□□□□ 0.2
GYPC-201ENST00000259254 RALAP11233 206 aa16.31■□□□□ 0.2
GYPC-201ENST00000259254 HMGA1P17096 107 aaKnown RBP16.31■□□□□ 0.2
GYPC-201ENST00000259254 GTF2F1P35269 517 aaKnown RBP eCLIP16.31■□□□□ 0.21e-6■■■■□ 23.1
GYPC-201ENST00000259254 MATKP42679 507 aa16.31■□□□□ 0.2
GYPC-201ENST00000259254 SULT1E1P49888 294 aa16.31■□□□□ 0.2
GYPC-201ENST00000259254 ZNF143P52747 638 aaPredicted RBP16.31■□□□□ 0.2
GYPC-201ENST00000259254 RBM10P98175 930 aaKnown RBP16.31■□□□□ 0.2
GYPC-201ENST00000259254 OGDHQ02218 1023 aa16.31■□□□□ 0.2
GYPC-201ENST00000259254 PIGHQ14442 188 aaPredicted RBP16.31■□□□□ 0.2
GYPC-201ENST00000259254 COL19A1Q14993 1142 aa16.31■□□□□ 0.2
GYPC-201ENST00000259254 C11orf63Q6NUN7 778 aa16.31■□□□□ 0.2
GYPC-201ENST00000259254 RTL10Q7L3V2 364 aa16.31■□□□□ 0.2
GYPC-201ENST00000259254 BHLHA9Q7RTU4 235 aa16.31■□□□□ 0.2
GYPC-201ENST00000259254 SCD5Q86SK9 330 aa16.31■□□□□ 0.2
GYPC-201ENST00000259254 SLC35F6Q8N357 371 aa16.31■□□□□ 0.2
GYPC-201ENST00000259254 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.31■□□□□ 0.2
GYPC-201ENST00000259254 CASP10Q92851 521 aa16.31■□□□□ 0.2
GYPC-201ENST00000259254 TRMT2BQ96GJ1 504 aaKnown RBP16.31■□□□□ 0.2
GYPC-201ENST00000259254 CFAP57Q96MR6 1250 aa16.31■□□□□ 0.2
GYPC-201ENST00000259254 NECAB3Q96P71 396 aaPredicted RBP16.31■□□□□ 0.2
GYPC-201ENST00000259254 SLC2A13Q96QE2 648 aa16.31■□□□□ 0.2
GYPC-201ENST00000259254 GCNAQ96QF7 691 aa16.31■□□□□ 0.2
GYPC-201ENST00000259254 CORO1BQ9BR76 489 aa16.31■□□□□ 0.2
GYPC-201ENST00000259254 CNPY3Q9BT09 278 aa16.31■□□□□ 0.2
GYPC-201ENST00000259254 GOLPH3Q9H4A6 298 aa16.31■□□□□ 0.2
GYPC-201ENST00000259254 ABCC13Q9NSE7 274 aa16.31■□□□□ 0.2
GYPC-201ENST00000259254 TRPM5Q9NZQ8 1165 aa16.31■□□□□ 0.2
GYPC-201ENST00000259254 NAALADL1Q9UQQ1 740 aa16.31■□□□□ 0.2
GYPC-201ENST00000259254 HYOU1Q9Y4L1 999 aa16.31■□□□□ 0.2
GYPC-201ENST00000259254 DPYSL4O14531 572 aa16.3■□□□□ 0.2
GYPC-201ENST00000259254 FTCDO95954 541 aa16.3■□□□□ 0.2
GYPC-201ENST00000259254 MYL4P12829 197 aa16.3■□□□□ 0.2
GYPC-201ENST00000259254 RARGP13631 454 aa16.3■□□□□ 0.2
GYPC-201ENST00000259254 KCNA5P22460 613 aa16.3■□□□□ 0.2
GYPC-201ENST00000259254 HOXA9P31269 272 aa16.3■□□□□ 0.2
GYPC-201ENST00000259254 NOS2P35228 1153 aa16.3■□□□□ 0.2
GYPC-201ENST00000259254 PSEN1P49768 467 aa16.3■□□□□ 0.2
GYPC-201ENST00000259254 ATP11AP98196 1134 aa16.3■□□□□ 0.2
GYPC-201ENST00000259254 HYAL1Q12794 435 aa16.3■□□□□ 0.2
GYPC-201ENST00000259254 CDO1Q16878 200 aa16.3■□□□□ 0.2
GYPC-201ENST00000259254 LEXMQ3ZCV2 418 aa16.3■□□□□ 0.2
GYPC-201ENST00000259254 TRNP1Q6NT89 227 aa16.3■□□□□ 0.2
GYPC-201ENST00000259254 ARCQ7LC44 396 aa16.3■□□□□ 0.2
GYPC-201ENST00000259254 PEX26Q7Z412 305 aa16.3■□□□□ 0.2
GYPC-201ENST00000259254 FNIP1Q8TF40 1166 aa16.3■□□□□ 0.2
GYPC-201ENST00000259254 OVCA2Q8WZ82 227 aa16.3■□□□□ 0.2
GYPC-201ENST00000259254 PABPC5Q96DU9 382 aaKnown RBP16.3■□□□□ 0.2
GYPC-201ENST00000259254 MYRFLQ96LU7 910 aa16.3■□□□□ 0.2
GYPC-201ENST00000259254 DDX23Q9BUQ8 820 aaKnown RBP16.3■□□□□ 0.2
GYPC-201ENST00000259254 FAM204AQ9H8W3 233 aa16.3■□□□□ 0.2
GYPC-201ENST00000259254 PIDD1Q9HB75 910 aa16.3■□□□□ 0.2
GYPC-201ENST00000259254 ZNF334Q9HCZ1 680 aaPredicted RBP16.3■□□□□ 0.2
GYPC-201ENST00000259254 ASAH2Q9NR71 780 aa16.3■□□□□ 0.2
GYPC-201ENST00000259254 DZANK1Q9NVP4 752 aa16.3■□□□□ 0.2
GYPC-201ENST00000259254 ZDHHC7Q9NXF8 308 aa16.3■□□□□ 0.2
GYPC-201ENST00000259254 MUC3AQ02505 3323 aa16.29■□□□□ 0.2
GYPC-201ENST00000259254 SYNJ2BP-COX16A0A087WUM0 186 aa16.29■□□□□ 0.2
GYPC-201ENST00000259254 CCDC195A0A1B0GUA6 201 aa16.29■□□□□ 0.2
GYPC-201ENST00000259254 RNF8O76064 485 aa16.29■□□□□ 0.2
GYPC-201ENST00000259254 TNNT1P13805 278 aa16.29■□□□□ 0.2
GYPC-201ENST00000259254 COMTP21964 271 aa16.29■□□□□ 0.2
GYPC-201ENST00000259254 SLC1A1P43005 524 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms