RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 CLCNKBP51801 687 aa15.24■□□□□ 0.03
TRAFD1-201ENST00000257604 ZNF143P52747 638 aaPredicted RBP15.24■□□□□ 0.03
TRAFD1-201ENST00000257604 TAP1Q03518 808 aa15.24■□□□□ 0.03
TRAFD1-201ENST00000257604 PRKCZQ05513 592 aa15.24■□□□□ 0.03
TRAFD1-201ENST00000257604 MSS51Q4VC12 460 aa15.24■□□□□ 0.03
TRAFD1-201ENST00000257604 MORN1Q5T089 497 aa15.24■□□□□ 0.03
TRAFD1-201ENST00000257604 APBB1IPQ7Z5R6 666 aaPredicted RBP15.24■□□□□ 0.03
TRAFD1-201ENST00000257604 ZNF467Q7Z7K2 595 aaPredicted RBP15.24■□□□□ 0.03
TRAFD1-201ENST00000257604 TRPV1Q8NER1 839 aa15.24■□□□□ 0.03
TRAFD1-201ENST00000257604 EMID1Q96A84 441 aaPredicted RBP15.24■□□□□ 0.03
TRAFD1-201ENST00000257604 KLHL29Q96CT2 875 aa15.24■□□□□ 0.03
TRAFD1-201ENST00000257604 SPDL1Q96EA4 605 aa15.24■□□□□ 0.03
TRAFD1-201ENST00000257604 CCDC77Q9BR77 488 aa15.24■□□□□ 0.03
TRAFD1-201ENST00000257604 SMIM35A0A1B0GVV1 85 aa15.24■□□□□ 0.03
TRAFD1-201ENST00000257604 KIF1CO43896 1103 aaKnown RBP15.24■□□□□ 0.03
TRAFD1-201ENST00000257604 B3GAT3O94766 335 aa15.24■□□□□ 0.03
TRAFD1-201ENST00000257604 KRT16P08779 473 aa15.24■□□□□ 0.03
TRAFD1-201ENST00000257604 NUDT17P0C025 328 aa15.24■□□□□ 0.03
TRAFD1-201ENST00000257604 RBL1P28749 1068 aa15.24■□□□□ 0.03
TRAFD1-201ENST00000257604 LILRA4P59901 499 aa15.24■□□□□ 0.03
TRAFD1-201ENST00000257604 HIF1AQ16665 826 aa15.24■□□□□ 0.03
TRAFD1-201ENST00000257604 FNBP1LQ5T0N5 605 aa15.24■□□□□ 0.03
TRAFD1-201ENST00000257604 PPP1R21Q6ZMI0 780 aa15.24■□□□□ 0.03
TRAFD1-201ENST00000257604 PIGZQ86VD9 579 aa15.24■□□□□ 0.03
TRAFD1-201ENST00000257604 PGM2Q96G03 612 aa15.24■□□□□ 0.03
TRAFD1-201ENST00000257604 WDR35Q9P2L0 1181 aa15.24■□□□□ 0.03
TRAFD1-201ENST00000257604 C2CD4BA6NLJ0 364 aa15.23■□□□□ 0.03
TRAFD1-201ENST00000257604 DNALI1O14645 258 aaPredicted RBP15.23■□□□□ 0.03
TRAFD1-201ENST00000257604 GABBR2O75899 941 aa15.23■□□□□ 0.03
TRAFD1-201ENST00000257604 ZBED1O96006 694 aa15.23■□□□□ 0.03
TRAFD1-201ENST00000257604 NEFHP12036 1026 aa15.23■□□□□ 0.03
TRAFD1-201ENST00000257604 AMPD1P23109 780 aa15.23■□□□□ 0.03
TRAFD1-201ENST00000257604 KLRC2P26717 231 aa15.23■□□□□ 0.03
TRAFD1-201ENST00000257604 GCKP35557 465 aa15.23■□□□□ 0.03
TRAFD1-201ENST00000257604 PURAQ00577 322 aaKnown RBP15.23■□□□□ 0.03
TRAFD1-201ENST00000257604 ROR1Q01973 937 aa15.23■□□□□ 0.03
TRAFD1-201ENST00000257604 CASC4Q6P4E1 433 aa15.23■□□□□ 0.03
TRAFD1-201ENST00000257604 C3orf62Q6ZUJ4 267 aa15.23■□□□□ 0.03
TRAFD1-201ENST00000257604 OSTM1Q86WC4 334 aa15.23■□□□□ 0.03
TRAFD1-201ENST00000257604 TTC16Q8NEE8 873 aa15.23■□□□□ 0.03
TRAFD1-201ENST00000257604 TRIB2Q92519 343 aa15.23■□□□□ 0.03
TRAFD1-201ENST00000257604 SPC25Q9HBM1 224 aa15.23■□□□□ 0.03
TRAFD1-201ENST00000257604 COL1A2P08123 1366 aa15.23■□□□□ 0.03
TRAFD1-201ENST00000257604 AKR1A1P14550 325 aa15.23■□□□□ 0.03
TRAFD1-201ENST00000257604 GBP1P32455 592 aa15.23■□□□□ 0.03
TRAFD1-201ENST00000257604 NCALDP61601 193 aa15.23■□□□□ 0.03
TRAFD1-201ENST00000257604 FKBP1BP68106 108 aa15.23■□□□□ 0.03
TRAFD1-201ENST00000257604 SLC6A3Q01959 620 aa15.23■□□□□ 0.03
TRAFD1-201ENST00000257604 LMNB2Q03252 620 aa15.23■□□□□ 0.03
TRAFD1-201ENST00000257604 GBE1Q04446 702 aa15.23■□□□□ 0.03
TRAFD1-201ENST00000257604 TRMT10CQ7L0Y3 403 aaKnown RBP15.23■□□□□ 0.03
TRAFD1-201ENST00000257604 DEFB106AQ8N104 65 aa15.23■□□□□ 0.03
TRAFD1-201ENST00000257604 CCDC185Q8N715 623 aa15.23■□□□□ 0.03
TRAFD1-201ENST00000257604 SPOCK2Q92563 424 aa15.23■□□□□ 0.03
TRAFD1-201ENST00000257604 CENPTQ96BT3 561 aa15.23■□□□□ 0.03
TRAFD1-201ENST00000257604 FAXDC2Q96IV6 333 aa15.23■□□□□ 0.03
TRAFD1-201ENST00000257604 TMEM237Q96Q45 408 aa15.23■□□□□ 0.03
TRAFD1-201ENST00000257604 AGO3Q9H9G7 860 aaKnown RBP15.23■□□□□ 0.03
TRAFD1-201ENST00000257604 TRMT13Q9NUP7 481 aaKnown RBP15.23■□□□□ 0.03
TRAFD1-201ENST00000257604 MIOSQ9NXC5 875 aa15.23■□□□□ 0.03
TRAFD1-201ENST00000257604 DDX43Q9NXZ2 648 aaKnown RBP15.23■□□□□ 0.03
TRAFD1-201ENST00000257604 SNX3O60493 162 aa15.22■□□□□ 0.03
TRAFD1-201ENST00000257604 AOC2O75106 756 aa15.22■□□□□ 0.03
TRAFD1-201ENST00000257604 BRCC3P46736 316 aa15.22■□□□□ 0.03
TRAFD1-201ENST00000257604 BIRC2Q13490 618 aa15.22■□□□□ 0.03
TRAFD1-201ENST00000257604 SIX6OS1Q8N1H7 587 aa15.22■□□□□ 0.03
TRAFD1-201ENST00000257604 SMG8Q8ND04 991 aaKnown RBP15.22■□□□□ 0.03
TRAFD1-201ENST00000257604 MCRS1Q96EZ8 462 aa15.22■□□□□ 0.03
TRAFD1-201ENST00000257604 YIPF3Q9GZM5 350 aa15.22■□□□□ 0.03
TRAFD1-201ENST00000257604 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.22■□□□□ 0.03
TRAFD1-201ENST00000257604 CCDC78A2IDD5 438 aa15.22■□□□□ 0.03
TRAFD1-201ENST00000257604 MANSC4A6NHS7 340 aaPredicted RBP15.22■□□□□ 0.03
TRAFD1-201ENST00000257604 NQO1P15559 274 aaKnown RBP15.22■□□□□ 0.03
TRAFD1-201ENST00000257604 STX2P32856 288 aa15.22■□□□□ 0.03
TRAFD1-201ENST00000257604 CDH5P33151 784 aaPredicted RBP15.22■□□□□ 0.03
TRAFD1-201ENST00000257604 SULT1E1P49888 294 aa15.22■□□□□ 0.03
TRAFD1-201ENST00000257604 CCNHP51946 323 aaPredicted RBP15.22■□□□□ 0.03
TRAFD1-201ENST00000257604 MCCD1P59942 119 aaPredicted RBP15.22■□□□□ 0.03
TRAFD1-201ENST00000257604 PPP2R5DQ14738 602 aa15.22■□□□□ 0.03
TRAFD1-201ENST00000257604 PPP1R2P3Q6NXS1 205 aa15.22■□□□□ 0.03
TRAFD1-201ENST00000257604 HFE2Q6ZVN8 426 aa15.22■□□□□ 0.03
TRAFD1-201ENST00000257604 CENPUQ71F23 418 aa15.22■□□□□ 0.03
TRAFD1-201ENST00000257604 TAOK1Q7L7X3 1001 aa15.22■□□□□ 0.03
TRAFD1-201ENST00000257604 FBXO36Q8NEA4 188 aa15.22■□□□□ 0.03
TRAFD1-201ENST00000257604 RNF34Q969K3 372 aa15.22■□□□□ 0.03
TRAFD1-201ENST00000257604 DESP17661 470 aa15.22■□□□□ 0.03
TRAFD1-201ENST00000257604 CCND3P30281 292 aaPredicted RBP15.22■□□□□ 0.03
TRAFD1-201ENST00000257604 SESN3P58005 492 aa15.22■□□□□ 0.03
TRAFD1-201ENST00000257604 CRADDP78560 199 aa15.22■□□□□ 0.03
TRAFD1-201ENST00000257604 POU5F1BQ06416 359 aa15.22■□□□□ 0.03
TRAFD1-201ENST00000257604 CACNB2Q08289 660 aaPredicted RBP15.22■□□□□ 0.03
TRAFD1-201ENST00000257604 PKN2Q16513 984 aaKnown RBP15.22■□□□□ 0.03
TRAFD1-201ENST00000257604 ZNF449Q6P9G9 518 aa15.22■□□□□ 0.03
TRAFD1-201ENST00000257604 KBTBD7Q8WVZ9 684 aa15.22■□□□□ 0.03
TRAFD1-201ENST00000257604 RMDN2Q96LZ7 410 aa15.22■□□□□ 0.03
TRAFD1-201ENST00000257604 PGLYRP2Q96PD5 576 aa15.22■□□□□ 0.03
TRAFD1-201ENST00000257604 TBCBQ99426 244 aa15.22■□□□□ 0.03
TRAFD1-201ENST00000257604 KRT82Q9NSB4 513 aa15.22■□□□□ 0.03
TRAFD1-201ENST00000257604 MYBPHLA2RUH7 354 aa15.21■□□□□ 0.03
TRAFD1-201ENST00000257604 C3orf70A6NLC5 250 aaPredicted RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms