RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 DCP2Q8IU60 420 aaKnown RBP12.27□□□□□ -0.44
CCNA1-201ENST00000255465 EPS8L3Q8TE67 593 aaKnown RBP12.27□□□□□ -0.44
CCNA1-201ENST00000255465 PGBD4Q96DM1 585 aa12.27□□□□□ -0.44
CCNA1-201ENST00000255465 C7orf26Q96N11 449 aa12.27□□□□□ -0.44
CCNA1-201ENST00000255465 SEMA4AQ9H3S1 761 aa12.27□□□□□ -0.44
CCNA1-201ENST00000255465 KCNK9Q9NPC2 374 aa12.27□□□□□ -0.44
CCNA1-201ENST00000255465 TCF7L2Q9NQB0 619 aa12.27□□□□□ -0.44
CCNA1-201ENST00000255465 VPS54Q9P1Q0 977 aa12.27□□□□□ -0.44
CCNA1-201ENST00000255465 NID2Q14112 1375 aa12.27□□□□□ -0.45
CCNA1-201ENST00000255465 BRCA2P51587 3418 aa12.27□□□□□ -0.45
CCNA1-201ENST00000255465 FAM172BPA6NC97 362 aa12.27□□□□□ -0.45
CCNA1-201ENST00000255465 TM7SF2O76062 418 aa12.27□□□□□ -0.45
CCNA1-201ENST00000255465 ALX3O95076 343 aa12.27□□□□□ -0.45
CCNA1-201ENST00000255465 MMP1P03956 469 aa12.27□□□□□ -0.45
CCNA1-201ENST00000255465 FYNP06241 537 aa12.27□□□□□ -0.45
CCNA1-201ENST00000255465 CCL5P13501 91 aa12.27□□□□□ -0.45
CCNA1-201ENST00000255465 HOXB1P14653 301 aaPredicted RBP12.27□□□□□ -0.45
CCNA1-201ENST00000255465 CACNB2Q08289 660 aaPredicted RBP12.27□□□□□ -0.45
CCNA1-201ENST00000255465 BAATQ14032 418 aaPredicted RBP12.27□□□□□ -0.45
CCNA1-201ENST00000255465 SPARCL1Q14515 664 aa12.27□□□□□ -0.45
CCNA1-201ENST00000255465 PPP2R5BQ15173 497 aa12.27□□□□□ -0.45
CCNA1-201ENST00000255465 MFSD14CQ5VZR4 134 aa12.27□□□□□ -0.45
CCNA1-201ENST00000255465 PEX26Q7Z412 305 aa12.27□□□□□ -0.45
CCNA1-201ENST00000255465 SMYD4Q8IYR2 804 aaPredicted RBP12.27□□□□□ -0.45
CCNA1-201ENST00000255465 BBOF1Q8ND07 529 aa12.27□□□□□ -0.45
CCNA1-201ENST00000255465 EXD1Q8NHP7 514 aa12.27□□□□□ -0.45
CCNA1-201ENST00000255465 MORC4Q8TE76 937 aa12.27□□□□□ -0.45
CCNA1-201ENST00000255465 VMP1Q96GC9 406 aa12.27□□□□□ -0.45
CCNA1-201ENST00000255465 UNC93B1Q9H1C4 597 aa12.27□□□□□ -0.45
CCNA1-201ENST00000255465 S100A14Q9HCY8 104 aa12.27□□□□□ -0.45
CCNA1-201ENST00000255465 SENP1Q9P0U3 644 aa12.27□□□□□ -0.45
CCNA1-201ENST00000255465 SEPT3Q9UH03 358 aa12.27□□□□□ -0.45
CCNA1-201ENST00000255465 ERGIC3Q9Y282 383 aa12.27□□□□□ -0.45
CCNA1-201ENST00000255465 SIK3Q9Y2K2 1263 aa12.27□□□□□ -0.45
CCNA1-201ENST00000255465 MRPL11Q9Y3B7 192 aaKnown RBP12.27□□□□□ -0.45
CCNA1-201ENST00000255465 PCDHA1Q9Y5I3 950 aa12.27□□□□□ -0.45
CCNA1-201ENST00000255465 A0A0A6YYK5 440 aaPredicted RBP12.26□□□□□ -0.45
CCNA1-201ENST00000255465 NPHP3-ACAD11A0A0J9YXS1 232 aa12.26□□□□□ -0.45
CCNA1-201ENST00000255465 FAM47DPA6NHR8 397 aa12.26□□□□□ -0.45
CCNA1-201ENST00000255465 KIAA0391O15091 583 aaKnown RBP12.26□□□□□ -0.45
CCNA1-201ENST00000255465 PRPF4O43172 522 aaKnown RBP eCLIP12.26□□□□□ -0.45
CCNA1-201ENST00000255465 XPOTO43592 962 aaKnown RBP12.26□□□□□ -0.45
CCNA1-201ENST00000255465 SCO2O43819 266 aa12.26□□□□□ -0.45
CCNA1-201ENST00000255465 PLEKP08567 350 aaPredicted RBP12.26□□□□□ -0.45
CCNA1-201ENST00000255465 PRKAR2AP13861 404 aaKnown RBP12.26□□□□□ -0.45
CCNA1-201ENST00000255465 FUT2Q10981 343 aa12.26□□□□□ -0.45
CCNA1-201ENST00000255465 TBCCQ15814 346 aa12.26□□□□□ -0.45
CCNA1-201ENST00000255465 SLC18A3Q16572 532 aa12.26□□□□□ -0.45
CCNA1-201ENST00000255465 NFE2Q16621 373 aaPredicted RBP12.26□□□□□ -0.45
CCNA1-201ENST00000255465 C6orf10Q5SRN2 563 aa12.26□□□□□ -0.45
CCNA1-201ENST00000255465 AGAP7PQ5VUJ5 663 aa12.26□□□□□ -0.45
CCNA1-201ENST00000255465 TTI2Q6NXR4 508 aa12.26□□□□□ -0.45
CCNA1-201ENST00000255465 ZDHHC24Q6UX98 284 aa12.26□□□□□ -0.45
CCNA1-201ENST00000255465 RNF207Q6ZRF8 634 aa12.26□□□□□ -0.45
CCNA1-201ENST00000255465 CYFIP1Q7L576 1253 aa12.26□□□□□ -0.45
CCNA1-201ENST00000255465 SLFN11Q7Z7L1 901 aa12.26□□□□□ -0.45
CCNA1-201ENST00000255465 OSTM1Q86WC4 334 aa12.26□□□□□ -0.45
CCNA1-201ENST00000255465 CADM3Q8N126 398 aa12.26□□□□□ -0.45
CCNA1-201ENST00000255465 MGARPQ8TDB4 240 aa12.26□□□□□ -0.45
CCNA1-201ENST00000255465 PPP4R1Q8TF05 950 aa12.26□□□□□ -0.45
CCNA1-201ENST00000255465 FBXL18Q96ME1 805 aa12.26□□□□□ -0.45
CCNA1-201ENST00000255465 TINF2Q9BSI4 451 aa12.26□□□□□ -0.45
CCNA1-201ENST00000255465 GRIP2Q9C0E4 1043 aa12.26□□□□□ -0.45
CCNA1-201ENST00000255465 RNF208Q9H0X6 261 aa12.26□□□□□ -0.45
CCNA1-201ENST00000255465 SNX25Q9H3E2 840 aa12.26□□□□□ -0.45
CCNA1-201ENST00000255465 TAS2R1Q9NYW7 299 aa12.26□□□□□ -0.45
CCNA1-201ENST00000255465 KCNN3Q9UGI6 736 aa12.26□□□□□ -0.45
CCNA1-201ENST00000255465 MTO1Q9Y2Z2 717 aaKnown RBP12.26□□□□□ -0.45
CCNA1-201ENST00000255465 CNTNAP5Q8WYK1 1306 aa12.26□□□□□ -0.45
CCNA1-201ENST00000255465 hCG_1642624A0A1W2PR95 340 aa12.25□□□□□ -0.45
CCNA1-201ENST00000255465 SOWAHBA6NEL2 793 aa12.25□□□□□ -0.45
CCNA1-201ENST00000255465 ZBTB11O95625 1053 aaPredicted RBP12.25□□□□□ -0.45
CCNA1-201ENST00000255465 INHBBP09529 407 aa12.25□□□□□ -0.45
CCNA1-201ENST00000255465 TCEA1P23193 301 aaKnown RBP12.25□□□□□ -0.45
CCNA1-201ENST00000255465 JAK1P23458 1154 aa12.25□□□□□ -0.45
CCNA1-201ENST00000255465 FOXN2P32314 431 aa12.25□□□□□ -0.45
CCNA1-201ENST00000255465 NUDT1P36639 197 aa12.25□□□□□ -0.45
CCNA1-201ENST00000255465 FDFT1P37268 417 aa12.25□□□□□ -0.45
CCNA1-201ENST00000255465 GNG2P59768 71 aa12.25□□□□□ -0.45
CCNA1-201ENST00000255465 RPS6P62753 249 aaKnown RBP12.25□□□□□ -0.45
CCNA1-201ENST00000255465 STK4Q13043 487 aa12.25□□□□□ -0.45
CCNA1-201ENST00000255465 ANO4Q32M45 955 aa12.25□□□□□ -0.45
CCNA1-201ENST00000255465 LPCAT2Q7L5N7 544 aa12.25□□□□□ -0.45
CCNA1-201ENST00000255465 HAUS6Q7Z4H7 955 aa12.25□□□□□ -0.45
CCNA1-201ENST00000255465 ZNF467Q7Z7K2 595 aaPredicted RBP12.25□□□□□ -0.45
CCNA1-201ENST00000255465 ANKRD42Q8N9B4 389 aa12.25□□□□□ -0.45
CCNA1-201ENST00000255465 ZNF75CPQ92670 426 aaPredicted RBP12.25□□□□□ -0.45
CCNA1-201ENST00000255465 YME1L1Q96TA2 773 aa12.25□□□□□ -0.45
CCNA1-201ENST00000255465 TMEM106CQ9BVX2 250 aa12.25□□□□□ -0.45
CCNA1-201ENST00000255465 C1orf21Q9H246 121 aa12.25□□□□□ -0.45
CCNA1-201ENST00000255465 HMX1Q9NP08 348 aaPredicted RBP12.25□□□□□ -0.45
CCNA1-201ENST00000255465 ANKMY1Q9P2S6 941 aa12.25□□□□□ -0.45
CCNA1-201ENST00000255465 SMG5Q9UPR3 1016 aaKnown RBP12.25□□□□□ -0.45
CCNA1-201ENST00000255465 SNTNA6NMZ2 147 aa12.25□□□□□ -0.45
CCNA1-201ENST00000255465 ICMTO60725 284 aa12.25□□□□□ -0.45
CCNA1-201ENST00000255465 CALML3P27482 149 aa12.25□□□□□ -0.45
CCNA1-201ENST00000255465 CCND3P30281 292 aaPredicted RBP12.25□□□□□ -0.45
CCNA1-201ENST00000255465 TTKP33981 857 aa12.25□□□□□ -0.45
CCNA1-201ENST00000255465 SOX10P56693 466 aa12.25□□□□□ -0.45
CCNA1-201ENST00000255465 DSTNP60981 165 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms