RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 ADAMTS4O75173 837 aa19.49■□□□□ 0.71
PDLIM4-201ENST00000253754 OAS1P00973 400 aaKnown RBP19.49■□□□□ 0.71
PDLIM4-201ENST00000253754 ATP5OP48047 213 aa19.49■□□□□ 0.71
PDLIM4-201ENST00000253754 HDAC4P56524 1084 aa19.49■□□□□ 0.71
PDLIM4-201ENST00000253754 STILQ15468 1287 aa19.49■□□□□ 0.71
PDLIM4-201ENST00000253754 ARHGEF18Q6ZSZ5 1173 aa19.49■□□□□ 0.71
PDLIM4-201ENST00000253754 PLD5Q8N7P1 536 aa19.49■□□□□ 0.71
PDLIM4-201ENST00000253754 RAET1EQ8TD07 263 aa19.49■□□□□ 0.71
PDLIM4-201ENST00000253754 PCDH18Q9HCL0 1135 aa19.49■□□□□ 0.71
PDLIM4-201ENST00000253754 ABCF3Q9NUQ8 709 aa19.49■□□□□ 0.71
PDLIM4-201ENST00000253754 SMIM28A0A1B0GU29 152 aa19.48■□□□□ 0.71
PDLIM4-201ENST00000253754 HOXC8P31273 242 aa19.48■□□□□ 0.71
PDLIM4-201ENST00000253754 SOX4Q06945 474 aaPredicted RBP19.48■□□□□ 0.71
PDLIM4-201ENST00000253754 PPP6R3Q5H9R7 873 aaPredicted RBP19.48■□□□□ 0.71
PDLIM4-201ENST00000253754 FAM47CQ5HY64 1035 aa19.48■□□□□ 0.71
PDLIM4-201ENST00000253754 CGB2Q6NT52 195 aa19.48■□□□□ 0.71
PDLIM4-201ENST00000253754 C3orf62Q6ZUJ4 267 aa19.48■□□□□ 0.71
PDLIM4-201ENST00000253754 CNPY4Q8N129 248 aa19.48■□□□□ 0.71
PDLIM4-201ENST00000253754 CCDC33Q8N5R6 958 aa19.48■□□□□ 0.71
PDLIM4-201ENST00000253754 LRRC52Q8N7C0 313 aa19.48■□□□□ 0.71
PDLIM4-201ENST00000253754 PCDH19Q8TAB3 1148 aa19.48■□□□□ 0.71
PDLIM4-201ENST00000253754 FBF1Q8TES7 1133 aa19.48■□□□□ 0.71
PDLIM4-201ENST00000253754 ZMYND8Q9ULU4 1186 aaPredicted RBP19.48■□□□□ 0.71
PDLIM4-201ENST00000253754 CHMP2BQ9UQN3 213 aa19.48■□□□□ 0.71
PDLIM4-201ENST00000253754 DPYSL4O14531 572 aa19.48■□□□□ 0.71
PDLIM4-201ENST00000253754 ASGR1P07306 291 aa19.48■□□□□ 0.71
PDLIM4-201ENST00000253754 LCP1P13796 627 aa19.48■□□□□ 0.71
PDLIM4-201ENST00000253754 SNX17Q15036 470 aa19.48■□□□□ 0.71
PDLIM4-201ENST00000253754 LACTB2Q53H82 288 aaPredicted RBP19.48■□□□□ 0.71
PDLIM4-201ENST00000253754 ATP11CQ8NB49 1132 aa19.48■□□□□ 0.71
PDLIM4-201ENST00000253754 SPOCK2Q92563 424 aa19.48■□□□□ 0.71
PDLIM4-201ENST00000253754 KDM4CQ9H3R0 1056 aa19.48■□□□□ 0.71
PDLIM4-201ENST00000253754 FAM124BQ9H5Z6 455 aaPredicted RBP19.48■□□□□ 0.71
PDLIM4-201ENST00000253754 AVILO75366 819 aa19.47■□□□□ 0.71
PDLIM4-201ENST00000253754 TFDP2Q14188 446 aa19.47■□□□□ 0.71
PDLIM4-201ENST00000253754 KCNA10Q16322 511 aa19.47■□□□□ 0.71
PDLIM4-201ENST00000253754 EFHC2Q5JST6 749 aa19.47■□□□□ 0.71
PDLIM4-201ENST00000253754 FBXO47Q5MNV8 452 aa19.47■□□□□ 0.71
PDLIM4-201ENST00000253754 FAXCQ5TGI0 409 aa19.47■□□□□ 0.71
PDLIM4-201ENST00000253754 APBB1IPQ7Z5R6 666 aaPredicted RBP19.47■□□□□ 0.71
PDLIM4-201ENST00000253754 ACTR5Q9H9F9 607 aaPredicted RBP19.47■□□□□ 0.71
PDLIM4-201ENST00000253754 USP29Q9HBJ7 922 aa19.47■□□□□ 0.71
PDLIM4-201ENST00000253754 PSMC3IPQ9P2W1 217 aaPredicted RBP19.47■□□□□ 0.71
PDLIM4-201ENST00000253754 GRID1Q9ULK0 1009 aa19.47■□□□□ 0.71
PDLIM4-201ENST00000253754 E7ESA3 106 aa19.46■□□□□ 0.71
PDLIM4-201ENST00000253754 NDC80O14777 642 aa19.46■□□□□ 0.71
PDLIM4-201ENST00000253754 KCNN4O15554 427 aa19.46■□□□□ 0.71
PDLIM4-201ENST00000253754 TAC1P20366 129 aa19.46■□□□□ 0.71
PDLIM4-201ENST00000253754 RPA3P35244 121 aaPredicted RBP19.46■□□□□ 0.71
PDLIM4-201ENST00000253754 GEMIN4P57678 1058 aaKnown RBP19.46■□□□□ 0.71
PDLIM4-201ENST00000253754 FAM133BQ5BKY9 247 aaKnown RBP19.46■□□□□ 0.71
PDLIM4-201ENST00000253754 PPP1R21Q6ZMI0 780 aa19.46■□□□□ 0.71
PDLIM4-201ENST00000253754 ARRDC4Q8NCT1 418 aa19.46■□□□□ 0.71
PDLIM4-201ENST00000253754 MAGEB18Q96M61 343 aa19.46■□□□□ 0.71
PDLIM4-201ENST00000253754 GTF2IRD1Q9UHL9 959 aa19.46■□□□□ 0.71
PDLIM4-201ENST00000253754 UBQLN1Q9UMX0 589 aaKnown RBP19.46■□□□□ 0.71
PDLIM4-201ENST00000253754 USP15Q9Y4E8 981 aaPredicted RBP19.46■□□□□ 0.71
PDLIM4-201ENST00000253754 PIRO00625 290 aa19.46■□□□□ 0.71
PDLIM4-201ENST00000253754 ASMTLO95671 621 aa19.46■□□□□ 0.71
PDLIM4-201ENST00000253754 IGFBP6P24592 240 aaPredicted RBP19.46■□□□□ 0.71
PDLIM4-201ENST00000253754 RBL1P28749 1068 aa19.46■□□□□ 0.71
PDLIM4-201ENST00000253754 RNASELQ05823 741 aaKnown RBP19.46■□□□□ 0.71
PDLIM4-201ENST00000253754 BOLA3Q53S33 107 aa19.46■□□□□ 0.71
PDLIM4-201ENST00000253754 UBXN11Q5T124 520 aa19.46■□□□□ 0.71
PDLIM4-201ENST00000253754 GDF6Q6KF10 455 aaPredicted RBP19.46■□□□□ 0.71
PDLIM4-201ENST00000253754 FAM47EQ6ZV65 393 aa19.46■□□□□ 0.71
PDLIM4-201ENST00000253754 TRPM8Q7Z2W7 1104 aa19.46■□□□□ 0.71
PDLIM4-201ENST00000253754 PDIK1LQ8N165 341 aa19.46■□□□□ 0.71
PDLIM4-201ENST00000253754 ZNF296Q8WUU4 475 aaPredicted RBP19.46■□□□□ 0.71
PDLIM4-201ENST00000253754 PAFAH2Q99487 392 aa19.46■□□□□ 0.71
PDLIM4-201ENST00000253754 HAUS2Q9NVX0 235 aa19.46■□□□□ 0.71
PDLIM4-201ENST00000253754 KPNA7A9QM74 516 aa19.45■□□□□ 0.7
PDLIM4-201ENST00000253754 APOL1O14791 398 aa19.45■□□□□ 0.7
PDLIM4-201ENST00000253754 SETSIPP0DME0 302 aa19.45■□□□□ 0.7
PDLIM4-201ENST00000253754 GNL1P36915 607 aaPredicted RBP19.45■□□□□ 0.7
PDLIM4-201ENST00000253754 ELK3P41970 407 aa19.45■□□□□ 0.7
PDLIM4-201ENST00000253754 BCAR1P56945 870 aa19.45■□□□□ 0.7
PDLIM4-201ENST00000253754 NR1H3Q13133 447 aa19.45■□□□□ 0.7
PDLIM4-201ENST00000253754 ARHGAP17Q68EM7 881 aa19.45■□□□□ 0.7
PDLIM4-201ENST00000253754 UNC93AQ86WB7 457 aa19.45■□□□□ 0.7
PDLIM4-201ENST00000253754 MAP7D3Q8IWC1 876 aa19.45■□□□□ 0.7
PDLIM4-201ENST00000253754 PALM2Q8IXS6 379 aa19.45■□□□□ 0.7
PDLIM4-201ENST00000253754 AGGF1Q8N302 714 aaeCLIP19.45■□□□□ 0.7
PDLIM4-201ENST00000253754 SLC2A14Q8TDB8 520 aa19.45■□□□□ 0.7
PDLIM4-201ENST00000253754 DENND1AQ8TEH3 1009 aa19.45■□□□□ 0.7
PDLIM4-201ENST00000253754 NDRG1Q92597 394 aaKnown RBP19.45■□□□□ 0.7
PDLIM4-201ENST00000253754 SMC6Q96SB8 1091 aa19.45■□□□□ 0.7
PDLIM4-201ENST00000253754 SLC24A2Q9UI40 661 aa19.45■□□□□ 0.7
PDLIM4-201ENST00000253754 RALGAPA2Q2PPJ7 1873 aa19.45■□□□□ 0.7
PDLIM4-201ENST00000253754 TKTP29401 623 aaKnown RBP19.45■□□□□ 0.7
PDLIM4-201ENST00000253754 HNRNPH1P31943 449 aaKnown RBP19.45■□□□□ 0.7
PDLIM4-201ENST00000253754 STIP1P31948 543 aaKnown RBP19.45■□□□□ 0.7
PDLIM4-201ENST00000253754 NKX3-2P78367 333 aa19.45■□□□□ 0.7
PDLIM4-201ENST00000253754 KCNJ11Q14654 390 aa19.45■□□□□ 0.7
PDLIM4-201ENST00000253754 PDK2Q15119 407 aa19.45■□□□□ 0.7
PDLIM4-201ENST00000253754 TAF2Q6P1X5 1199 aa19.45■□□□□ 0.7
PDLIM4-201ENST00000253754 SPATA21Q7Z572 469 aa19.45■□□□□ 0.7
PDLIM4-201ENST00000253754 NME8Q8N427 588 aa19.45■□□□□ 0.7
PDLIM4-201ENST00000253754 FAF2Q96CS3 445 aa19.45■□□□□ 0.7
PDLIM4-201ENST00000253754 SGSM3Q96HU1 749 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms