RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 DESP17661 470 aa22.55■■□□□ 1.2
CLN6-201ENST00000249806 TGM2P21980 687 aa22.55■■□□□ 1.2
CLN6-201ENST00000249806 RPL34P49207 117 aaKnown RBP22.55■■□□□ 1.2
CLN6-201ENST00000249806 RNASELQ05823 741 aaKnown RBP22.55■■□□□ 1.2
CLN6-201ENST00000249806 NR1H3Q13133 447 aa22.55■■□□□ 1.2
CLN6-201ENST00000249806 NME8Q8N427 588 aa22.55■■□□□ 1.2
CLN6-201ENST00000249806 FAF2Q96CS3 445 aa22.55■■□□□ 1.2
CLN6-201ENST00000249806 TGS1Q96RS0 853 aaKnown RBP22.55■■□□□ 1.2
CLN6-201ENST00000249806 PAIP2Q9BPZ3 127 aaKnown RBP22.55■■□□□ 1.2
CLN6-201ENST00000249806 PHACTR1Q9C0D0 580 aa22.55■■□□□ 1.2
CLN6-201ENST00000249806 NSRP1Q9H0G5 558 aaKnown RBP22.55■■□□□ 1.2
CLN6-201ENST00000249806 RAB6BQ9NRW1 208 aa22.55■■□□□ 1.2
CLN6-201ENST00000249806 SLC24A2Q9UI40 661 aa22.55■■□□□ 1.2
CLN6-201ENST00000249806 Q9Y3F1 56 aa22.55■■□□□ 1.2
CLN6-201ENST00000249806 C6orf222P0C671 652 aaPredicted RBP22.55■■□□□ 1.2
CLN6-201ENST00000249806 CYP2F1P24903 491 aa22.55■■□□□ 1.2
CLN6-201ENST00000249806 PHBP35232 272 aa22.55■■□□□ 1.2
CLN6-201ENST00000249806 KCNJ11Q14654 390 aa22.55■■□□□ 1.2
CLN6-201ENST00000249806 ZKSCAN8Q15776 578 aaPredicted RBP22.55■■□□□ 1.2
CLN6-201ENST00000249806 FAXCQ5TGI0 409 aa22.55■■□□□ 1.2
CLN6-201ENST00000249806 CCDC185Q8N715 623 aa22.55■■□□□ 1.2
CLN6-201ENST00000249806 B3GALNT2Q8NCR0 500 aa22.55■■□□□ 1.2
CLN6-201ENST00000249806 ZNF670Q9BS34 389 aa22.55■■□□□ 1.2
CLN6-201ENST00000249806 NRDE2Q9H7Z3 1164 aa22.55■■□□□ 1.2
CLN6-201ENST00000249806 PSMC3IPQ9P2W1 217 aaPredicted RBP22.55■■□□□ 1.2
CLN6-201ENST00000249806 BEST1O76090 585 aa22.54■■□□□ 1.2
CLN6-201ENST00000249806 HOXC8P31273 242 aa22.54■■□□□ 1.2
CLN6-201ENST00000249806 ELK3P41970 407 aa22.54■■□□□ 1.2
CLN6-201ENST00000249806 AFF1P51825 1210 aaKnown RBP22.54■■□□□ 1.2
CLN6-201ENST00000249806 ACTN3Q08043 901 aaPredicted RBP22.54■■□□□ 1.2
CLN6-201ENST00000249806 SLC10A2Q12908 348 aaPredicted RBP22.54■■□□□ 1.2
CLN6-201ENST00000249806 PIGZQ86VD9 579 aa22.54■■□□□ 1.2
CLN6-201ENST00000249806 MTMR10Q9NXD2 777 aa22.54■■□□□ 1.2
CLN6-201ENST00000249806 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP22.54■■□□□ 1.2
CLN6-201ENST00000249806 MANSC4A6NHS7 340 aaPredicted RBP22.54■■□□□ 1.2
CLN6-201ENST00000249806 CCT8L1PA6NM43 557 aa22.54■■□□□ 1.2
CLN6-201ENST00000249806 GNAT1P11488 350 aa22.54■■□□□ 1.2
CLN6-201ENST00000249806 FOXN2P32314 431 aa22.54■■□□□ 1.2
CLN6-201ENST00000249806 GBE1Q04446 702 aa22.54■■□□□ 1.2
CLN6-201ENST00000249806 ITIH4Q14624 930 aa22.54■■□□□ 1.2
CLN6-201ENST00000249806 FBXW10Q5XX13 1052 aa22.54■■□□□ 1.2
CLN6-201ENST00000249806 PPP1R21Q6ZMI0 780 aa22.54■■□□□ 1.2
CLN6-201ENST00000249806 FUKQ8N0W3 1084 aa22.54■■□□□ 1.2
CLN6-201ENST00000249806 TNIP3Q96KP6 325 aa22.54■■□□□ 1.2
CLN6-201ENST00000249806 MAGEB18Q96M61 343 aa22.54■■□□□ 1.2
CLN6-201ENST00000249806 APBA2Q99767 749 aa22.54■■□□□ 1.2
CLN6-201ENST00000249806 AP4E1Q9UPM8 1137 aa22.54■■□□□ 1.2
CLN6-201ENST00000249806 SMAPO00193 183 aa22.53■■□□□ 1.2
CLN6-201ENST00000249806 CYB561D2O14569 222 aa22.53■■□□□ 1.2
CLN6-201ENST00000249806 TNPO2O14787 897 aaKnown RBP22.53■■□□□ 1.2
CLN6-201ENST00000249806 ZBED1O96006 694 aa22.53■■□□□ 1.2
CLN6-201ENST00000249806 CTGFP29279 349 aa22.53■■□□□ 1.2
CLN6-201ENST00000249806 RPA3P35244 121 aaPredicted RBP22.53■■□□□ 1.2
CLN6-201ENST00000249806 DPYSL2Q16555 572 aa22.53■■□□□ 1.2
CLN6-201ENST00000249806 WSCD1Q658N2 575 aa22.53■■□□□ 1.2
CLN6-201ENST00000249806 TRPV1Q8NER1 839 aa22.53■■□□□ 1.2
CLN6-201ENST00000249806 HSFY1Q96LI6 401 aa22.53■■□□□ 1.2
CLN6-201ENST00000249806 SMC6Q96SB8 1091 aa22.53■■□□□ 1.2
CLN6-201ENST00000249806 ACSS3Q9H6R3 686 aa22.53■■□□□ 1.2
CLN6-201ENST00000249806 IGHA2P01877 340 aa22.53■■□□□ 1.2
CLN6-201ENST00000249806 RARBP10826 455 aa22.53■■□□□ 1.2
CLN6-201ENST00000249806 ACADSBP45954 432 aa22.53■■□□□ 1.2
CLN6-201ENST00000249806 ADIGQ0VDE8 80 aa22.53■■□□□ 1.2
CLN6-201ENST00000249806 TTC31Q49AM3 519 aaPredicted RBP22.53■■□□□ 1.2
CLN6-201ENST00000249806 IFNL1Q8IU54 200 aa22.53■■□□□ 1.2
CLN6-201ENST00000249806 PYROXD2Q8N2H3 581 aa22.53■■□□□ 1.2
CLN6-201ENST00000249806 AGGF1Q8N302 714 aaeCLIP22.53■■□□□ 1.2
CLN6-201ENST00000249806 CCDC110Q8TBZ0 833 aa22.53■■□□□ 1.2
CLN6-201ENST00000249806 DENND1AQ8TEH3 1009 aa22.53■■□□□ 1.2
CLN6-201ENST00000249806 FAM149B1Q96BN6 582 aa22.53■■□□□ 1.2
CLN6-201ENST00000249806 PPP1R10Q96QC0 940 aaKnown RBP22.53■■□□□ 1.2
CLN6-201ENST00000249806 PAFAH2Q99487 392 aa22.53■■□□□ 1.2
CLN6-201ENST00000249806 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.53■■□□□ 1.2
CLN6-201ENST00000249806 PAK5Q9P286 719 aa22.53■■□□□ 1.2
CLN6-201ENST00000249806 BCLAF3A2AJT9 711 aaKnown RBP22.52■■□□□ 1.2
CLN6-201ENST00000249806 H0YHG0 523 aa22.52■■□□□ 1.2
CLN6-201ENST00000249806 ASMTLO95671 621 aa22.52■■□□□ 1.2
CLN6-201ENST00000249806 WARSP23381 471 aaKnown RBP22.52■■□□□ 1.2
CLN6-201ENST00000249806 GNASQ5JWF2 1037 aa22.52■■□□□ 1.2
CLN6-201ENST00000249806 PAQR9Q6ZVX9 377 aa22.52■■□□□ 1.2
CLN6-201ENST00000249806 DEFB106AQ8N104 65 aa22.52■■□□□ 1.2
CLN6-201ENST00000249806 TOP6BLQ8N6T0 577 aa22.52■■□□□ 1.2
CLN6-201ENST00000249806 RTP4Q96DX8 246 aa22.52■■□□□ 1.2
CLN6-201ENST00000249806 SGSM3Q96HU1 749 aa22.52■■□□□ 1.2
CLN6-201ENST00000249806 KCTD15Q96SI1 283 aaPredicted RBP22.52■■□□□ 1.2
CLN6-201ENST00000249806 TSPAN18Q96SJ8 248 aa22.52■■□□□ 1.2
CLN6-201ENST00000249806 NCAPGQ9BPX3 1015 aa22.52■■□□□ 1.2
CLN6-201ENST00000249806 KDM4CQ9H3R0 1056 aa22.52■■□□□ 1.2
CLN6-201ENST00000249806 CDY2AQ9Y6F7 541 aa22.52■■□□□ 1.2
CLN6-201ENST00000249806 XPO1O14980 1071 aaKnown RBP22.51■■□□□ 1.19
CLN6-201ENST00000249806 CHADO15335 359 aa22.51■■□□□ 1.19
CLN6-201ENST00000249806 PRPF4O43172 522 aaKnown RBP eCLIP22.51■■□□□ 1.194e-7■■■■■ 28.6
CLN6-201ENST00000249806 OAS1P00973 400 aaKnown RBP22.51■■□□□ 1.19
CLN6-201ENST00000249806 TAC1P20366 129 aa22.51■■□□□ 1.19
CLN6-201ENST00000249806 NDUFV1P49821 464 aa22.51■■□□□ 1.19
CLN6-201ENST00000249806 PITX1P78337 314 aaPredicted RBP22.51■■□□□ 1.19
CLN6-201ENST00000249806 RASA2Q15283 850 aa22.51■■□□□ 1.19
CLN6-201ENST00000249806 KIAA0319Q5VV43 1072 aa22.51■■□□□ 1.19
CLN6-201ENST00000249806 ADGRD1Q6QNK2 874 aa22.51■■□□□ 1.19
CLN6-201ENST00000249806 CXCL17Q6UXB2 119 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms