RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 CCHCR1Q8TD31 782 aa14.81□□□□□ -0.04
SDF2-201ENST00000247020 HSPH1Q92598 858 aa14.81□□□□□ -0.04
SDF2-201ENST00000247020 CEP295NLQ96MC4 621 aa14.81□□□□□ -0.04
SDF2-201ENST00000247020 SNRNP25Q9BV90 132 aaKnown RBP14.81□□□□□ -0.04
SDF2-201ENST00000247020 FUT8Q9BYC5 575 aa14.81□□□□□ -0.04
SDF2-201ENST00000247020 VIPAS39Q9H9C1 493 aa14.81□□□□□ -0.04
SDF2-201ENST00000247020 IL23AQ9NPF7 189 aa14.81□□□□□ -0.04
SDF2-201ENST00000247020 PRDM5Q9NQX1 630 aaPredicted RBP14.81□□□□□ -0.04
SDF2-201ENST00000247020 CHST7Q9NS84 486 aa14.81□□□□□ -0.04
SDF2-201ENST00000247020 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.81□□□□□ -0.04
SDF2-201ENST00000247020 COMMD8Q9NX08 183 aa14.81□□□□□ -0.04
SDF2-201ENST00000247020 RCOR3Q9P2K3 495 aaPredicted RBP14.81□□□□□ -0.04
SDF2-201ENST00000247020 STK39Q9UEW8 545 aa14.81□□□□□ -0.04
SDF2-201ENST00000247020 GREB1Q4ZG55 1949 aa14.8□□□□□ -0.04
SDF2-201ENST00000247020 YJEFN3A6XGL0 299 aa14.8□□□□□ -0.04
SDF2-201ENST00000247020 E7ENQ6 273 aa14.8□□□□□ -0.04
SDF2-201ENST00000247020 APOC4-APOC2K7ER74 178 aa14.8□□□□□ -0.04
SDF2-201ENST00000247020 MAP2K7O14733 419 aa14.8□□□□□ -0.04
SDF2-201ENST00000247020 TNFRSF10BO14763 440 aa14.8□□□□□ -0.04
SDF2-201ENST00000247020 SEC31AO94979 1220 aaKnown RBP14.8□□□□□ -0.04
SDF2-201ENST00000247020 UPP2O95045 317 aa14.8□□□□□ -0.04
SDF2-201ENST00000247020 APOC2P02655 101 aa14.8□□□□□ -0.04
SDF2-201ENST00000247020 USP17L7P0C7H9 530 aa14.8□□□□□ -0.04
SDF2-201ENST00000247020 KRT10P13645 584 aa14.8□□□□□ -0.04
SDF2-201ENST00000247020 CSF2RAP15509 400 aa14.8□□□□□ -0.04
SDF2-201ENST00000247020 CARSP49589 748 aaKnown RBP14.8□□□□□ -0.04
SDF2-201ENST00000247020 WDR5P61964 334 aaKnown RBP14.8□□□□□ -0.04
SDF2-201ENST00000247020 MRPS25P82663 173 aaKnown RBP14.8□□□□□ -0.04
SDF2-201ENST00000247020 DPYSL3Q14195 570 aa14.8□□□□□ -0.04
SDF2-201ENST00000247020 KRT81Q14533 505 aa14.8□□□□□ -0.04
SDF2-201ENST00000247020 KAZNQ674X7 775 aa14.8□□□□□ -0.04
SDF2-201ENST00000247020 SCYL2Q6P3W7 929 aa14.8□□□□□ -0.04
SDF2-201ENST00000247020 CEP57Q86XR8 500 aa14.8□□□□□ -0.04
SDF2-201ENST00000247020 C1orf54Q8WWF1 131 aa14.8□□□□□ -0.04
SDF2-201ENST00000247020 NKD2Q969F2 451 aaPredicted RBP14.8□□□□□ -0.04
SDF2-201ENST00000247020 NTAN1Q96AB6 310 aa14.8□□□□□ -0.04
SDF2-201ENST00000247020 FAF2Q96CS3 445 aa14.8□□□□□ -0.04
SDF2-201ENST00000247020 IGSF21Q96ID5 467 aa14.8□□□□□ -0.04
SDF2-201ENST00000247020 RHOBTB2Q9BYZ6 727 aa14.8□□□□□ -0.04
SDF2-201ENST00000247020 FBXO44Q9H4M3 255 aa14.8□□□□□ -0.04
SDF2-201ENST00000247020 BACE2Q9Y5Z0 518 aa14.8□□□□□ -0.04
SDF2-201ENST00000247020 CEP350Q5VT06 3117 aa14.8□□□□□ -0.04
SDF2-201ENST00000247020 ZNF638Q14966 1978 aaKnown RBP14.79□□□□□ -0.04
SDF2-201ENST00000247020 KIAA0100Q14667 2235 aaKnown RBP14.79□□□□□ -0.04
SDF2-201ENST00000247020 ZSCAN5CA6NGD5 496 aaPredicted RBP14.79□□□□□ -0.04
SDF2-201ENST00000247020 NDC80O14777 642 aa14.79□□□□□ -0.04
SDF2-201ENST00000247020 LIASO43766 372 aa14.79□□□□□ -0.04
SDF2-201ENST00000247020 FYNP06241 537 aa14.79□□□□□ -0.04
SDF2-201ENST00000247020 LAG3P18627 525 aa14.79□□□□□ -0.04
SDF2-201ENST00000247020 CYP2F1P24903 491 aa14.79□□□□□ -0.04
SDF2-201ENST00000247020 ITGB8P26012 769 aa14.79□□□□□ -0.04
SDF2-201ENST00000247020 ZNF135P52742 658 aaPredicted RBP14.79□□□□□ -0.04
SDF2-201ENST00000247020 SLC5A3P53794 718 aa14.79□□□□□ -0.04
SDF2-201ENST00000247020 PPIGQ13427 754 aaKnown RBP eCLIP14.79□□□□□ -0.04
SDF2-201ENST00000247020 PTK6Q13882 451 aa14.79□□□□□ -0.04
SDF2-201ENST00000247020 OTUD1Q5VV17 481 aaPredicted RBP14.79□□□□□ -0.04
SDF2-201ENST00000247020 PIK3R5Q8WYR1 880 aa14.79□□□□□ -0.04
SDF2-201ENST00000247020 ACSF2Q96CM8 615 aaPredicted RBP14.79□□□□□ -0.04
SDF2-201ENST00000247020 ZNF558Q96NG5 402 aa14.79□□□□□ -0.04
SDF2-201ENST00000247020 TRIM51Q9BSJ1 452 aa14.79□□□□□ -0.04
SDF2-201ENST00000247020 MAK16Q9BXY0 300 aaKnown RBP14.79□□□□□ -0.04
SDF2-201ENST00000247020 PCDH18Q9HCL0 1135 aa14.79□□□□□ -0.04
SDF2-201ENST00000247020 PRDM10Q9NQV6 1147 aa14.79□□□□□ -0.04
SDF2-201ENST00000247020 ABCC13Q9NSE7 274 aa14.79□□□□□ -0.04
SDF2-201ENST00000247020 ABI2Q9NYB9 513 aaPredicted RBP14.79□□□□□ -0.04
SDF2-201ENST00000247020 HSFX1Q9UBD0 423 aa14.79□□□□□ -0.04
SDF2-201ENST00000247020 HCSTQ9UBK5 93 aa14.79□□□□□ -0.04
SDF2-201ENST00000247020 MTRRQ9UBK8 725 aa14.79□□□□□ -0.04
SDF2-201ENST00000247020 NFU1Q9UMS0 254 aa14.79□□□□□ -0.04
SDF2-201ENST00000247020 AP4E1Q9UPM8 1137 aa14.79□□□□□ -0.04
SDF2-201ENST00000247020 R3HDM2Q9Y2K5 976 aaKnown RBP14.79□□□□□ -0.04
SDF2-201ENST00000247020 ESYT3A0FGR9 886 aa14.78□□□□□ -0.04
SDF2-201ENST00000247020 CST8O60676 142 aa14.78□□□□□ -0.04
SDF2-201ENST00000247020 ITGAVP06756 1048 aa14.78□□□□□ -0.04
SDF2-201ENST00000247020 OR4Q2P0C623 313 aa14.78□□□□□ -0.04
SDF2-201ENST00000247020 NCAM1P13591 858 aa14.78□□□□□ -0.04
SDF2-201ENST00000247020 ZFXP17010 805 aaPredicted RBP14.78□□□□□ -0.04
SDF2-201ENST00000247020 TGM2P21980 687 aa14.78□□□□□ -0.04
SDF2-201ENST00000247020 VCPP55072 806 aaKnown RBP14.78□□□□□ -0.04
SDF2-201ENST00000247020 DEUP1Q05D60 604 aa14.78□□□□□ -0.04
SDF2-201ENST00000247020 SCAPQ12770 1279 aa14.78□□□□□ -0.04
SDF2-201ENST00000247020 BYSLQ13895 437 aaKnown RBP14.78□□□□□ -0.04
SDF2-201ENST00000247020 PPP1R7Q15435 360 aa14.78□□□□□ -0.04
SDF2-201ENST00000247020 RTP2Q5QGT7 225 aa14.78□□□□□ -0.04
SDF2-201ENST00000247020 SLC8B1Q6J4K2 584 aa14.78□□□□□ -0.04
SDF2-201ENST00000247020 KCNT2Q6UVM3 1135 aa14.78□□□□□ -0.04
SDF2-201ENST00000247020 HFE2Q6ZVN8 426 aa14.78□□□□□ -0.04
SDF2-201ENST00000247020 RFX6Q8HWS3 928 aa14.78□□□□□ -0.04
SDF2-201ENST00000247020 GPR65Q8IYL9 337 aa14.78□□□□□ -0.04
SDF2-201ENST00000247020 NUP93Q8N1F7 819 aa14.78□□□□□ -0.04
SDF2-201ENST00000247020 ARHGAP18Q8N392 663 aa14.78□□□□□ -0.04
SDF2-201ENST00000247020 MREGQ8N565 214 aa14.78□□□□□ -0.04
SDF2-201ENST00000247020 SLC35B2Q8TB61 432 aa14.78□□□□□ -0.04
SDF2-201ENST00000247020 IFT81Q8WYA0 676 aa14.78□□□□□ -0.04
SDF2-201ENST00000247020 SPATA17Q96L03 361 aa14.78□□□□□ -0.04
SDF2-201ENST00000247020 RNF157Q96PX1 679 aa14.78□□□□□ -0.04
SDF2-201ENST00000247020 CALN1Q9BXU9 219 aa14.78□□□□□ -0.04
SDF2-201ENST00000247020 ADAM33Q9BZ11 813 aa14.78□□□□□ -0.04
SDF2-201ENST00000247020 ACBD3Q9H3P7 528 aa14.78□□□□□ -0.04
SDF2-201ENST00000247020 IL37Q9NZH6 218 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms