RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 DCTN2Q13561 401 aaKnown RBP11.95□□□□□ -0.5
SOX9-201ENST00000245479 C16orf72Q14CZ0 275 aa11.95□□□□□ -0.5
SOX9-201ENST00000245479 CDCA2Q69YH5 1023 aaPredicted RBP11.95□□□□□ -0.5
SOX9-201ENST00000245479 AFAP1L2Q8N4X5 818 aa11.95□□□□□ -0.5
SOX9-201ENST00000245479 TTC13Q8NBP0 860 aa11.95□□□□□ -0.5
SOX9-201ENST00000245479 ECSITQ9BQ95 431 aa11.95□□□□□ -0.5
SOX9-201ENST00000245479 ARL8BQ9NVJ2 186 aa11.95□□□□□ -0.5
SOX9-201ENST00000245479 TMEM59LQ9UK28 342 aa11.95□□□□□ -0.5
SOX9-201ENST00000245479 RPL26L1Q9UNX3 145 aaKnown RBP11.95□□□□□ -0.5
SOX9-201ENST00000245479 STXBP5LQ9Y2K9 1186 aa11.95□□□□□ -0.5
SOX9-201ENST00000245479 MYO9BQ13459 2157 aa11.95□□□□□ -0.5
SOX9-201ENST00000245479 KDM1AO60341 852 aa11.95□□□□□ -0.5
SOX9-201ENST00000245479 USP1O94782 785 aa11.95□□□□□ -0.5
SOX9-201ENST00000245479 GZMAP12544 262 aa11.95□□□□□ -0.5
SOX9-201ENST00000245479 ANPEPP15144 967 aa11.95□□□□□ -0.5
SOX9-201ENST00000245479 SOX11P35716 441 aa11.95□□□□□ -0.5
SOX9-201ENST00000245479 ATXN1P54253 815 aaKnown RBP11.95□□□□□ -0.5
SOX9-201ENST00000245479 ZCCHC23Q6ZST2 131 aa11.95□□□□□ -0.5
SOX9-201ENST00000245479 RAPH1Q70E73 1250 aa11.95□□□□□ -0.5
SOX9-201ENST00000245479 FAM83AQ86UY5 434 aa11.95□□□□□ -0.5
SOX9-201ENST00000245479 NDUFAF2Q8N183 169 aa11.95□□□□□ -0.5
SOX9-201ENST00000245479 FBXO36Q8NEA4 188 aa11.95□□□□□ -0.5
SOX9-201ENST00000245479 CATSPER1Q8NEC5 780 aa11.95□□□□□ -0.5
SOX9-201ENST00000245479 MMP19Q99542 508 aa11.95□□□□□ -0.5
SOX9-201ENST00000245479 PRPF18Q99633 342 aaKnown RBP11.95□□□□□ -0.5
SOX9-201ENST00000245479 SIK2Q9H0K1 926 aa11.95□□□□□ -0.5
SOX9-201ENST00000245479 TMCO1Q9UM00 188 aa11.95□□□□□ -0.5
SOX9-201ENST00000245479 MROH7Q68CQ1 1323 aa11.95□□□□□ -0.5
SOX9-201ENST00000245479 KNL1Q8NG31 2342 aa11.95□□□□□ -0.5
SOX9-201ENST00000245479 LAMA2P24043 3122 aaKnown RBP11.95□□□□□ -0.5
SOX9-201ENST00000245479 RNF103-CHMP3A0A140T963 221 aa11.95□□□□□ -0.5
SOX9-201ENST00000245479 C2CD2LO14523 706 aa11.95□□□□□ -0.5
SOX9-201ENST00000245479 KLHL2O95198 593 aa11.95□□□□□ -0.5
SOX9-201ENST00000245479 INSRRP14616 1297 aa11.95□□□□□ -0.5
SOX9-201ENST00000245479 CCNFP41002 786 aa11.95□□□□□ -0.5
SOX9-201ENST00000245479 NOVP48745 357 aa11.95□□□□□ -0.5
SOX9-201ENST00000245479 CCDC15Q0P6D6 951 aa11.95□□□□□ -0.5
SOX9-201ENST00000245479 RFWD3Q6PCD5 774 aa11.95□□□□□ -0.5
SOX9-201ENST00000245479 RIPOR1Q6ZS17 1223 aa11.95□□□□□ -0.5
SOX9-201ENST00000245479 ANKS1BQ7Z6G8 1248 aa11.95□□□□□ -0.5
SOX9-201ENST00000245479 FAM131BQ86XD5 332 aa11.95□□□□□ -0.5
SOX9-201ENST00000245479 USP33Q8TEY7 942 aa11.95□□□□□ -0.5
SOX9-201ENST00000245479 RNPEPQ9H4A4 650 aa11.95□□□□□ -0.5
SOX9-201ENST00000245479 GOLGA2P5Q9HBQ8 144 aa11.95□□□□□ -0.5
SOX9-201ENST00000245479 SETD4Q9NVD3 440 aa11.95□□□□□ -0.5
SOX9-201ENST00000245479 WARS2Q9UGM6 360 aaKnown RBP11.95□□□□□ -0.5
SOX9-201ENST00000245479 IP6K2Q9UHH9 426 aa11.95□□□□□ -0.5
SOX9-201ENST00000245479 SLC24A2Q9UI40 661 aa11.95□□□□□ -0.5
SOX9-201ENST00000245479 COMMD10Q9Y6G5 202 aa11.95□□□□□ -0.5
SOX9-201ENST00000245479 BRCA2P51587 3418 aa11.95□□□□□ -0.5
SOX9-201ENST00000245479 ZBBXA8MT70 800 aa11.94□□□□□ -0.5
SOX9-201ENST00000245479 NFKBIEO00221 500 aa11.94□□□□□ -0.5
SOX9-201ENST00000245479 GMNNO75496 209 aa11.94□□□□□ -0.5
SOX9-201ENST00000245479 KCNA2P16389 499 aa11.94□□□□□ -0.5
SOX9-201ENST00000245479 BCAR1P56945 870 aa11.94□□□□□ -0.5
SOX9-201ENST00000245479 OASLQ15646 514 aaKnown RBP11.94□□□□□ -0.5
SOX9-201ENST00000245479 GPR162Q16538 588 aa11.94□□□□□ -0.5
SOX9-201ENST00000245479 B3GNT6Q6ZMB0 384 aa11.94□□□□□ -0.5
SOX9-201ENST00000245479 KIAA0319LQ8IZA0 1049 aa11.94□□□□□ -0.5
SOX9-201ENST00000245479 CMTM5Q96DZ9 223 aa11.94□□□□□ -0.5
SOX9-201ENST00000245479 ZNF333Q96JL9 665 aa11.94□□□□□ -0.5
SOX9-201ENST00000245479 UPF3AQ9H1J1 476 aaKnown RBP11.94□□□□□ -0.5
SOX9-201ENST00000245479 CCDC134Q9H6E4 229 aa11.94□□□□□ -0.5
SOX9-201ENST00000245479 KIAA1586Q9HCI6 787 aa11.94□□□□□ -0.5
SOX9-201ENST00000245479 NUDT5Q9UKK9 219 aa11.94□□□□□ -0.5
SOX9-201ENST00000245479 PACSIN3Q9UKS6 424 aa11.94□□□□□ -0.5
SOX9-201ENST00000245479 LRRC42Q9Y546 428 aa11.94□□□□□ -0.5
SOX9-201ENST00000245479 USP54Q70EL1 1684 aa11.94□□□□□ -0.5
SOX9-201ENST00000245479 GDF10P55107 478 aa11.94□□□□□ -0.5
SOX9-201ENST00000245479 SLC5A9Q2M3M2 681 aa11.94□□□□□ -0.5
SOX9-201ENST00000245479 MAP1SQ66K74 1059 aaPredicted RBP11.94□□□□□ -0.5
SOX9-201ENST00000245479 DNAAF3Q8N9W5 541 aa11.94□□□□□ -0.5
SOX9-201ENST00000245479 SH3TC2Q8TF17 1288 aa11.94□□□□□ -0.5
SOX9-201ENST00000245479 C7orf43Q8WVR3 580 aa11.94□□□□□ -0.5
SOX9-201ENST00000245479 SLC10A4Q96EP9 437 aa11.94□□□□□ -0.5
SOX9-201ENST00000245479 MAML3Q96JK9 1138 aa11.94□□□□□ -0.5
SOX9-201ENST00000245479 CCDC138Q96M89 665 aa11.94□□□□□ -0.5
SOX9-201ENST00000245479 OSMRQ99650 979 aa11.94□□□□□ -0.5
SOX9-201ENST00000245479 FAM96AQ9H5X1 160 aa11.94□□□□□ -0.5
SOX9-201ENST00000245479 RMI1Q9H9A7 625 aa11.94□□□□□ -0.5
SOX9-201ENST00000245479 ZDHHC18Q9NUE0 388 aa11.94□□□□□ -0.5
SOX9-201ENST00000245479 STX18Q9P2W9 335 aaKnown RBP11.94□□□□□ -0.5
SOX9-201ENST00000245479 ACTL7BQ9Y614 415 aa11.94□□□□□ -0.5
SOX9-201ENST00000245479 TNRC6CQ9HCJ0 1690 aaKnown RBP11.94□□□□□ -0.5
SOX9-201ENST00000245479 DDX60Q8IY21 1712 aaKnown RBP11.94□□□□□ -0.5
SOX9-201ENST00000245479 ARIH2O95376 493 aa11.94□□□□□ -0.5
SOX9-201ENST00000245479 EDN1P05305 212 aa11.94□□□□□ -0.5
SOX9-201ENST00000245479 PYGBP11216 843 aa11.94□□□□□ -0.5
SOX9-201ENST00000245479 CETPP11597 493 aa11.94□□□□□ -0.5
SOX9-201ENST00000245479 ADCYAP1R1P41586 468 aa11.94□□□□□ -0.5
SOX9-201ENST00000245479 PSMD7P51665 324 aa11.94□□□□□ -0.5
SOX9-201ENST00000245479 RPS6KA2Q15349 733 aa11.94□□□□□ -0.5
SOX9-201ENST00000245479 TCHHL1Q5QJ38 904 aaPredicted RBP11.94□□□□□ -0.5
SOX9-201ENST00000245479 ANKRD22Q5VYY1 191 aa11.94□□□□□ -0.5
SOX9-201ENST00000245479 VSTM1Q6UX27 236 aa11.94□□□□□ -0.5
SOX9-201ENST00000245479 OR6Y1Q8NGX8 325 aa11.94□□□□□ -0.5
SOX9-201ENST00000245479 FAM136AQ96C01 138 aa11.94□□□□□ -0.5
SOX9-201ENST00000245479 TMEM109Q9BVC6 243 aa11.94□□□□□ -0.5
SOX9-201ENST00000245479 NIF3L1Q9GZT8 377 aa11.94□□□□□ -0.5
SOX9-201ENST00000245479 SPATC1LQ9H0A9 340 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms