RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 RAXQ9Y2V3 346 aa14.64□□□□□ -0.07
DDX39A-201ENST00000242776 LOC400499M0QZD8 3231 aa14.64□□□□□ -0.07
DDX39A-201ENST00000242776 GOLGA8CPA6NN73 597 aa14.63□□□□□ -0.07
DDX39A-201ENST00000242776 ZBTB24O43167 697 aaPredicted RBP14.63□□□□□ -0.07
DDX39A-201ENST00000242776 CAPNS1P04632 268 aa14.63□□□□□ -0.07
DDX39A-201ENST00000242776 GARTP22102 1010 aa14.63□□□□□ -0.07
DDX39A-201ENST00000242776 YWHAQP27348 245 aa14.63□□□□□ -0.07
DDX39A-201ENST00000242776 GNL1P36915 607 aaPredicted RBP14.63□□□□□ -0.07
DDX39A-201ENST00000242776 NOP14P78316 857 aaKnown RBP14.63□□□□□ -0.07
DDX39A-201ENST00000242776 NFKBIBQ15653 356 aa14.63□□□□□ -0.07
DDX39A-201ENST00000242776 DDX42Q86XP3 938 aaKnown RBP eCLIP14.63□□□□□ -0.074e-6■□□□□ 8.2
DDX39A-201ENST00000242776 CBWD2Q8IUF1 395 aa14.63□□□□□ -0.07
DDX39A-201ENST00000242776 NAXDQ8IW45 347 aa14.63□□□□□ -0.07
DDX39A-201ENST00000242776 CHPFQ8IZ52 775 aa14.63□□□□□ -0.07
DDX39A-201ENST00000242776 DHX58Q96C10 678 aa14.63□□□□□ -0.07
DDX39A-201ENST00000242776 DNAJC19Q96DA6 116 aa14.63□□□□□ -0.07
DDX39A-201ENST00000242776 LRIG1Q96JA1 1093 aa14.63□□□□□ -0.07
DDX39A-201ENST00000242776 PANK2Q9BZ23 570 aa14.63□□□□□ -0.07
DDX39A-201ENST00000242776 CCSER2Q9H7U1 834 aa14.63□□□□□ -0.07
DDX39A-201ENST00000242776 DNAJC17Q9NVM6 304 aaKnown RBP14.63□□□□□ -0.07
DDX39A-201ENST00000242776 TBC1D14Q9P2M4 693 aa14.63□□□□□ -0.07
DDX39A-201ENST00000242776 A0A0A0MRY4 1105 aa14.63□□□□□ -0.07
DDX39A-201ENST00000242776 A0A1W2PQF6 199 aa14.63□□□□□ -0.07
DDX39A-201ENST00000242776 E2F8A0AVK6 867 aa14.63□□□□□ -0.07
DDX39A-201ENST00000242776 FAM221BA6H8Z2 402 aa14.63□□□□□ -0.07
DDX39A-201ENST00000242776 NEDD8-MDP1E9PL57 170 aa14.63□□□□□ -0.07
DDX39A-201ENST00000242776 ZNF202O95125 648 aa14.63□□□□□ -0.07
DDX39A-201ENST00000242776 GAP43P17677 238 aa14.63□□□□□ -0.07
DDX39A-201ENST00000242776 PTPN1P18031 435 aaKnown RBP14.63□□□□□ -0.07
DDX39A-201ENST00000242776 NTSR1P30989 418 aa14.63□□□□□ -0.07
DDX39A-201ENST00000242776 HOXD12P35452 270 aa14.63□□□□□ -0.07
DDX39A-201ENST00000242776 PPP3CCP48454 512 aa14.63□□□□□ -0.07
DDX39A-201ENST00000242776 DPH6Q7L8W6 267 aa14.63□□□□□ -0.07
DDX39A-201ENST00000242776 TRMT11Q7Z4G4 463 aaKnown RBP14.63□□□□□ -0.07
DDX39A-201ENST00000242776 ETFBKMTQ8IXQ9 262 aa14.63□□□□□ -0.07
DDX39A-201ENST00000242776 FMR1NBQ8N0W7 255 aaPredicted RBP14.63□□□□□ -0.07
DDX39A-201ENST00000242776 TERB1Q8NA31 727 aa14.63□□□□□ -0.07
DDX39A-201ENST00000242776 RDH13Q8NBN7 331 aa14.63□□□□□ -0.07
DDX39A-201ENST00000242776 SCAMP5Q8TAC9 235 aa14.63□□□□□ -0.07
DDX39A-201ENST00000242776 IPO4Q8TEX9 1081 aaKnown RBP14.63□□□□□ -0.07
DDX39A-201ENST00000242776 SETD7Q8WTS6 366 aaKnown RBP14.63□□□□□ -0.07
DDX39A-201ENST00000242776 BHMTQ93088 406 aa14.63□□□□□ -0.07
DDX39A-201ENST00000242776 HPS3Q969F9 1004 aa14.63□□□□□ -0.07
DDX39A-201ENST00000242776 ZFRQ96KR1 1074 aaKnown RBP14.63□□□□□ -0.07
DDX39A-201ENST00000242776 C8orf48Q96LL4 319 aa14.63□□□□□ -0.07
DDX39A-201ENST00000242776 MED10Q9BTT4 135 aa14.63□□□□□ -0.07
DDX39A-201ENST00000242776 B3GNT5Q9BYG0 378 aa14.63□□□□□ -0.07
DDX39A-201ENST00000242776 TRIM9Q9C026 710 aa14.63□□□□□ -0.07
DDX39A-201ENST00000242776 NACA2Q9H009 215 aa14.63□□□□□ -0.07
DDX39A-201ENST00000242776 MIR1-1HGQ9H1L0 117 aa14.63□□□□□ -0.07
DDX39A-201ENST00000242776 SPHK2Q9NRA0 654 aa14.63□□□□□ -0.07
DDX39A-201ENST00000242776 DNAAF2Q9NVR5 837 aaKnown RBP14.63□□□□□ -0.07
DDX39A-201ENST00000242776 SEL1LQ9UBV2 794 aa14.63□□□□□ -0.07
DDX39A-201ENST00000242776 PCDHB13Q9Y5F0 798 aa14.63□□□□□ -0.07
DDX39A-201ENST00000242776 CELSR3Q9NYQ7 3312 aa14.62□□□□□ -0.07
DDX39A-201ENST00000242776 A0A087X0B3 334 aa14.62□□□□□ -0.07
DDX39A-201ENST00000242776 CST3P01034 146 aaPredicted RBP14.62□□□□□ -0.07
DDX39A-201ENST00000242776 DLATP10515 647 aaKnown RBP14.62□□□□□ -0.07
DDX39A-201ENST00000242776 GRIK2Q13002 908 aa14.62□□□□□ -0.07
DDX39A-201ENST00000242776 E2F4Q16254 413 aa14.62□□□□□ -0.07
DDX39A-201ENST00000242776 DUOXA2Q1HG44 320 aa14.62□□□□□ -0.07
DDX39A-201ENST00000242776 SKOR2Q2VWA4 1001 aaPredicted RBP14.62□□□□□ -0.07
DDX39A-201ENST00000242776 HECTD3Q5T447 861 aa14.62□□□□□ -0.07
DDX39A-201ENST00000242776 GRAMD4Q6IC98 578 aa14.62□□□□□ -0.07
DDX39A-201ENST00000242776 SDE2Q6IQ49 451 aa14.62□□□□□ -0.07
DDX39A-201ENST00000242776 TPGS1Q6ZTW0 290 aa14.62□□□□□ -0.07
DDX39A-201ENST00000242776 TOGARAM2Q6ZUX3 1019 aa14.62□□□□□ -0.07
DDX39A-201ENST00000242776 SV2BQ7L1I2 683 aa14.62□□□□□ -0.07
DDX39A-201ENST00000242776 RABEPKQ7Z6M1 372 aa14.62□□□□□ -0.07
DDX39A-201ENST00000242776 SLCO6A1Q86UG4 719 aa14.62□□□□□ -0.07
DDX39A-201ENST00000242776 NUP93Q8N1F7 819 aa14.62□□□□□ -0.07
DDX39A-201ENST00000242776 GLIS3Q8NEA6 775 aa14.62□□□□□ -0.07
DDX39A-201ENST00000242776 ENGASEQ8NFI3 743 aa14.62□□□□□ -0.07
DDX39A-201ENST00000242776 ELMO3Q96BJ8 720 aa14.62□□□□□ -0.07
DDX39A-201ENST00000242776 TIGD1Q96MW7 591 aa14.62□□□□□ -0.07
DDX39A-201ENST00000242776 KCNK16Q96T55 309 aa14.62□□□□□ -0.07
DDX39A-201ENST00000242776 LRRC27Q9C0I9 530 aa14.62□□□□□ -0.07
DDX39A-201ENST00000242776 IL21RQ9HBE5 538 aa14.62□□□□□ -0.07
DDX39A-201ENST00000242776 PANK4Q9NVE7 773 aa14.62□□□□□ -0.07
DDX39A-201ENST00000242776 CACNA2D2Q9NY47 1150 aa14.62□□□□□ -0.07
DDX39A-201ENST00000242776 GMIPQ9P107 970 aa14.62□□□□□ -0.07
DDX39A-201ENST00000242776 HOOK1Q9UJC3 728 aaKnown RBP14.62□□□□□ -0.07
DDX39A-201ENST00000242776 GCN1Q92616 2671 aaKnown RBP14.61□□□□□ -0.07
DDX39A-201ENST00000242776 ACACAQ13085 2346 aa14.61□□□□□ -0.07
DDX39A-201ENST00000242776 ZNF233A6NK53 670 aa14.61□□□□□ -0.07
DDX39A-201ENST00000242776 MEI4A8MW99 385 aa14.61□□□□□ -0.07
DDX39A-201ENST00000242776 A8MXQ7 604 aa14.61□□□□□ -0.07
DDX39A-201ENST00000242776 WASH3PC4AMC7 463 aa14.61□□□□□ -0.07
DDX39A-201ENST00000242776 HOXC11O43248 304 aaPredicted RBP14.61□□□□□ -0.07
DDX39A-201ENST00000242776 SLFN14P0C7P3 912 aa14.61□□□□□ -0.07
DDX39A-201ENST00000242776 AMPD3Q01432 767 aa14.61□□□□□ -0.07
DDX39A-201ENST00000242776 CCNI2Q6ZMN8 369 aaPredicted RBP14.61□□□□□ -0.07
DDX39A-201ENST00000242776 LIMS2Q7Z4I7 341 aa14.61□□□□□ -0.07
DDX39A-201ENST00000242776 ADAMTS14Q8WXS8 1223 aa14.61□□□□□ -0.07
DDX39A-201ENST00000242776 BBC3Q96PG8 261 aaPredicted RBP14.61□□□□□ -0.07
DDX39A-201ENST00000242776 ELOVL4Q9GZR5 314 aa14.61□□□□□ -0.07
DDX39A-201ENST00000242776 TNMDQ9H2S6 317 aa14.61□□□□□ -0.07
DDX39A-201ENST00000242776 NXF1Q9UBU9 619 aaKnown RBP14.61□□□□□ -0.07
DDX39A-201ENST00000242776 SERTAD1Q9UHV2 236 aa14.61□□□□□ -0.07
DDX39A-201ENST00000242776 BPTFQ12830 3046 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms