RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 PCDH10Q9P2E7 1040 aa15.88■□□□□ 0.13
HDHD3-201ENST00000238379 RASAL2Q9UJF2 1139 aa15.88■□□□□ 0.13
HDHD3-201ENST00000238379 NAALADL1Q9UQQ1 740 aa15.88■□□□□ 0.13
HDHD3-201ENST00000238379 MKI67P46013 3256 aaKnown RBP15.88■□□□□ 0.13
HDHD3-201ENST00000238379 MAP2K7O14733 419 aa15.87■□□□□ 0.13
HDHD3-201ENST00000238379 ECEL1O95672 775 aa15.87■□□□□ 0.13
HDHD3-201ENST00000238379 LTFP02788 710 aa15.87■□□□□ 0.13
HDHD3-201ENST00000238379 AMHP03971 560 aa15.87■□□□□ 0.13
HDHD3-201ENST00000238379 IL4RP24394 825 aa15.87■□□□□ 0.13
HDHD3-201ENST00000238379 GRIK1P39086 918 aa15.87■□□□□ 0.13
HDHD3-201ENST00000238379 EPHB4P54760 987 aa15.87■□□□□ 0.13
HDHD3-201ENST00000238379 DRG2P55039 364 aaKnown RBP15.87■□□□□ 0.13
HDHD3-201ENST00000238379 DPYSL3Q14195 570 aa15.87■□□□□ 0.13
HDHD3-201ENST00000238379 PDK2Q15119 407 aa15.87■□□□□ 0.13
HDHD3-201ENST00000238379 CA9Q16790 459 aa15.87■□□□□ 0.13
HDHD3-201ENST00000238379 ERMARDQ5T6L9 678 aa15.87■□□□□ 0.13
HDHD3-201ENST00000238379 EMBQ6PCB8 327 aa15.87■□□□□ 0.13
HDHD3-201ENST00000238379 RSPO2Q6UXX9 243 aaPredicted RBP15.87■□□□□ 0.13
HDHD3-201ENST00000238379 TMCO2Q7Z6W1 182 aaPredicted RBP15.87■□□□□ 0.13
HDHD3-201ENST00000238379 UBE2Q1Q7Z7E8 422 aa15.87■□□□□ 0.13
HDHD3-201ENST00000238379 ATL2Q8NHH9 583 aa15.87■□□□□ 0.13
HDHD3-201ENST00000238379 SCAMP5Q8TAC9 235 aa15.87■□□□□ 0.13
HDHD3-201ENST00000238379 FAM71BQ8TC56 605 aa15.87■□□□□ 0.13
HDHD3-201ENST00000238379 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.87■□□□□ 0.13
HDHD3-201ENST00000238379 CALN1Q9BXU9 219 aa15.87■□□□□ 0.13
HDHD3-201ENST00000238379 RC3H2Q9HBD1 1191 aaKnown RBP15.87■□□□□ 0.13
HDHD3-201ENST00000238379 PCDH18Q9HCL0 1135 aa15.87■□□□□ 0.13
HDHD3-201ENST00000238379 GPATCH2LQ9NWQ4 482 aa15.87■□□□□ 0.13
HDHD3-201ENST00000238379 STAP1Q9ULZ2 295 aa15.87■□□□□ 0.13
HDHD3-201ENST00000238379 LIASO43766 372 aa15.87■□□□□ 0.13
HDHD3-201ENST00000238379 CST8O60676 142 aa15.87■□□□□ 0.13
HDHD3-201ENST00000238379 EFCAB14O75071 495 aa15.87■□□□□ 0.13
HDHD3-201ENST00000238379 WDR5P61964 334 aaKnown RBP15.87■□□□□ 0.13
HDHD3-201ENST00000238379 MMRN1Q13201 1228 aa15.87■□□□□ 0.13
HDHD3-201ENST00000238379 DRICH1Q6PGQ1 229 aaPredicted RBP15.87■□□□□ 0.13
HDHD3-201ENST00000238379 VSTM1Q6UX27 236 aa15.87■□□□□ 0.13
HDHD3-201ENST00000238379 HDXQ7Z353 690 aa15.87■□□□□ 0.13
HDHD3-201ENST00000238379 GDAP1L1Q96MZ0 367 aa15.87■□□□□ 0.13
HDHD3-201ENST00000238379 TTPALQ9BTX7 342 aa15.87■□□□□ 0.13
HDHD3-201ENST00000238379 TRIM31Q9BZY9 425 aa15.87■□□□□ 0.13
HDHD3-201ENST00000238379 DPH5Q9H2P9 285 aa15.87■□□□□ 0.13
HDHD3-201ENST00000238379 FAM114A2Q9NRY5 505 aa15.87■□□□□ 0.13
HDHD3-201ENST00000238379 FEZ2Q9UHY8 353 aaPredicted RBP15.87■□□□□ 0.13
HDHD3-201ENST00000238379 PCDHB5Q9Y5E4 795 aa15.87■□□□□ 0.13
HDHD3-201ENST00000238379 H7C4K7 107 aa15.86■□□□□ 0.13
HDHD3-201ENST00000238379 M0QYT0 321 aa15.86■□□□□ 0.13
HDHD3-201ENST00000238379 FAM153BP0C7A2 387 aa15.86■□□□□ 0.13
HDHD3-201ENST00000238379 ACRP10323 421 aa15.86■□□□□ 0.13
HDHD3-201ENST00000238379 MAGEA11P43364 429 aa15.86■□□□□ 0.13
HDHD3-201ENST00000238379 SLC5A3P53794 718 aa15.86■□□□□ 0.13
HDHD3-201ENST00000238379 DYNLT1P63172 113 aa15.86■□□□□ 0.13
HDHD3-201ENST00000238379 GPR17Q13304 367 aa15.86■□□□□ 0.13
HDHD3-201ENST00000238379 CASP8Q14790 479 aa15.86■□□□□ 0.13
HDHD3-201ENST00000238379 DPYSL2Q16555 572 aa15.86■□□□□ 0.13
HDHD3-201ENST00000238379 FAM153CQ494X1 144 aa15.86■□□□□ 0.13
HDHD3-201ENST00000238379 ANKS3Q6ZW76 656 aa15.86■□□□□ 0.13
HDHD3-201ENST00000238379 FAM131BQ86XD5 332 aa15.86■□□□□ 0.13
HDHD3-201ENST00000238379 VSIG1Q86XK7 387 aa15.86■□□□□ 0.13
HDHD3-201ENST00000238379 MAP7D3Q8IWC1 876 aa15.86■□□□□ 0.13
HDHD3-201ENST00000238379 SCN4BQ8IWT1 228 aa15.86■□□□□ 0.13
HDHD3-201ENST00000238379 RNF168Q8IYW5 571 aaPredicted RBP15.86■□□□□ 0.13
HDHD3-201ENST00000238379 CCDC185Q8N715 623 aa15.86■□□□□ 0.13
HDHD3-201ENST00000238379 CAVIN3Q969G5 261 aa15.86■□□□□ 0.13
HDHD3-201ENST00000238379 IGSF21Q96ID5 467 aa15.86■□□□□ 0.13
HDHD3-201ENST00000238379 VN1R3Q9BXE9 311 aa15.86■□□□□ 0.13
HDHD3-201ENST00000238379 NEUROG2Q9H2A3 272 aa15.86■□□□□ 0.13
HDHD3-201ENST00000238379 FAM153AQ9UHL3 310 aa15.86■□□□□ 0.13
HDHD3-201ENST00000238379 DNPEPQ9ULA0 475 aa15.86■□□□□ 0.13
HDHD3-201ENST00000238379 NEU2Q9Y3R4 380 aa15.86■□□□□ 0.13
HDHD3-201ENST00000238379 COL4A4P53420 1690 aaPredicted RBP15.86■□□□□ 0.13
HDHD3-201ENST00000238379 PATJQ8NI35 1801 aa15.86■□□□□ 0.13
HDHD3-201ENST00000238379 CAPN9O14815 690 aa15.85■□□□□ 0.13
HDHD3-201ENST00000238379 NCAM1P13591 858 aa15.85■□□□□ 0.13
HDHD3-201ENST00000238379 L1CAMP32004 1257 aa15.85■□□□□ 0.13
HDHD3-201ENST00000238379 RDXP35241 583 aaKnown RBP15.85■□□□□ 0.13
HDHD3-201ENST00000238379 HLTFQ14527 1009 aaKnown RBP eCLIP15.85■□□□□ 0.13
HDHD3-201ENST00000238379 KRT81Q14533 505 aa15.85■□□□□ 0.13
HDHD3-201ENST00000238379 BSPRYQ5W0U4 402 aa15.85■□□□□ 0.13
HDHD3-201ENST00000238379 FAM117BQ6P1L5 589 aa15.85■□□□□ 0.13
HDHD3-201ENST00000238379 KCNT2Q6UVM3 1135 aa15.85■□□□□ 0.13
HDHD3-201ENST00000238379 SYDE1Q6ZW31 735 aaPredicted RBP15.85■□□□□ 0.13
HDHD3-201ENST00000238379 SND1Q7KZF4 910 aaKnown RBP eCLIP15.85■□□□□ 0.13
HDHD3-201ENST00000238379 RFX6Q8HWS3 928 aa15.85■□□□□ 0.13
HDHD3-201ENST00000238379 ATAD1Q8NBU5 361 aa15.85■□□□□ 0.13
HDHD3-201ENST00000238379 SLC35B2Q8TB61 432 aa15.85■□□□□ 0.13
HDHD3-201ENST00000238379 GRK7Q8WTQ7 553 aa15.85■□□□□ 0.13
HDHD3-201ENST00000238379 NKD2Q969F2 451 aaPredicted RBP15.85■□□□□ 0.13
HDHD3-201ENST00000238379 C8orf48Q96LL4 319 aa15.85■□□□□ 0.13
HDHD3-201ENST00000238379 PGLYRP2Q96PD5 576 aa15.85■□□□□ 0.13
HDHD3-201ENST00000238379 RNF157Q96PX1 679 aa15.85■□□□□ 0.13
HDHD3-201ENST00000238379 OXCT2Q9BYC2 517 aaPredicted RBP15.85■□□□□ 0.13
HDHD3-201ENST00000238379 MTMR10Q9NXD2 777 aa15.85■□□□□ 0.13
HDHD3-201ENST00000238379 SAE1Q9UBE0 346 aaPredicted RBP15.85■□□□□ 0.13
HDHD3-201ENST00000238379 ZNF487B1APH4 448 aa15.84■□□□□ 0.13
HDHD3-201ENST00000238379 BAIAP3O94812 1187 aa15.84■□□□□ 0.13
HDHD3-201ENST00000238379 EN2P19622 333 aaPredicted RBP15.84■□□□□ 0.13
HDHD3-201ENST00000238379 ARPP19P56211 112 aa15.84■□□□□ 0.13
HDHD3-201ENST00000238379 KRT17Q04695 432 aa15.84■□□□□ 0.13
HDHD3-201ENST00000238379 DEUP1Q05D60 604 aa15.84■□□□□ 0.13
HDHD3-201ENST00000238379 BYSLQ13895 437 aaKnown RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms