RNA–Protein interactions for RNA: ENST00000231526.8

TRAPPC13-201, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TRAPPC13, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-201ENST00000231526 TRIM56Q9BRZ2 755 aaKnown RBP5.65□□□□□ -1.5
TRAPPC13-201ENST00000231526 FUT8Q9BYC5 575 aa5.65□□□□□ -1.5
TRAPPC13-201ENST00000231526 LHX5Q9H2C1 402 aa5.65□□□□□ -1.5
TRAPPC13-201ENST00000231526 TTC7AQ9ULT0 858 aaPredicted RBP5.65□□□□□ -1.5
TRAPPC13-201ENST00000231526 PADI3Q9ULW8 664 aa5.65□□□□□ -1.5
TRAPPC13-201ENST00000231526 L1RE1Q9UN81 338 aa5.65□□□□□ -1.5
TRAPPC13-201ENST00000231526 PIRO00625 290 aa5.65□□□□□ -1.51
TRAPPC13-201ENST00000231526 PTGESO14684 152 aa5.65□□□□□ -1.51
TRAPPC13-201ENST00000231526 AKAP10O43572 662 aa5.65□□□□□ -1.51
TRAPPC13-201ENST00000231526 FKTNO75072 461 aa5.65□□□□□ -1.51
TRAPPC13-201ENST00000231526 CABYRO75952 493 aa5.65□□□□□ -1.51
TRAPPC13-201ENST00000231526 THP07101 528 aa5.65□□□□□ -1.51
TRAPPC13-201ENST00000231526 CCDC159P0C7I6 412 aa5.65□□□□□ -1.51
TRAPPC13-201ENST00000231526 KCNE1P15382 129 aa5.65□□□□□ -1.51
TRAPPC13-201ENST00000231526 GRK4P32298 578 aa5.65□□□□□ -1.51
TRAPPC13-201ENST00000231526 PNPLA4P41247 253 aa5.65□□□□□ -1.51
TRAPPC13-201ENST00000231526 GPD2P43304 727 aa5.65□□□□□ -1.51
TRAPPC13-201ENST00000231526 AFF1P51825 1210 aaKnown RBP5.65□□□□□ -1.51
TRAPPC13-201ENST00000231526 CDR1P51861 262 aa5.65□□□□□ -1.51
TRAPPC13-201ENST00000231526 LILRA4P59901 499 aa5.65□□□□□ -1.51
TRAPPC13-201ENST00000231526 NKX3-2P78367 333 aa5.65□□□□□ -1.51
TRAPPC13-201ENST00000231526 TMED1Q13445 227 aa5.65□□□□□ -1.51
TRAPPC13-201ENST00000231526 CASP8Q14790 479 aa5.65□□□□□ -1.51
TRAPPC13-201ENST00000231526 ARHGEF6Q15052 776 aa5.65□□□□□ -1.51
TRAPPC13-201ENST00000231526 CLUL1Q15846 466 aa5.65□□□□□ -1.51
TRAPPC13-201ENST00000231526 SOWAHAQ2M3V2 549 aa5.65□□□□□ -1.51
TRAPPC13-201ENST00000231526 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.65□□□□□ -1.51
TRAPPC13-201ENST00000231526 RTL10Q7L3V2 364 aa5.65□□□□□ -1.51
TRAPPC13-201ENST00000231526 DDX42Q86XP3 938 aaKnown RBP eCLIP5.65□□□□□ -1.51
TRAPPC13-201ENST00000231526 ZNF784Q8NCA9 323 aaPredicted RBP5.65□□□□□ -1.51
TRAPPC13-201ENST00000231526 N4BP2L2Q92802 583 aaPredicted RBP5.65□□□□□ -1.51
TRAPPC13-201ENST00000231526 MAGOHBQ96A72 148 aaKnown RBP5.65□□□□□ -1.51
TRAPPC13-201ENST00000231526 TIFAQ96CG3 184 aa5.65□□□□□ -1.51
TRAPPC13-201ENST00000231526 OSBPL7Q9BZF2 842 aa5.65□□□□□ -1.51
TRAPPC13-201ENST00000231526 ERVK-5Q9HDB9 667 aa5.65□□□□□ -1.51
TRAPPC13-201ENST00000231526 STARD7Q9NQZ5 370 aa5.65□□□□□ -1.51
TRAPPC13-201ENST00000231526 CACNG4Q9UBN1 327 aa5.65□□□□□ -1.51
TRAPPC13-201ENST00000231526 HESX1Q9UBX0 185 aa5.65□□□□□ -1.51
TRAPPC13-201ENST00000231526 CYTH4Q9UIA0 394 aa5.65□□□□□ -1.51
TRAPPC13-201ENST00000231526 TRIM17Q9Y577 477 aa5.65□□□□□ -1.51
TRAPPC13-201ENST00000231526 LAMA3Q16787 3333 aa5.65□□□□□ -1.51
TRAPPC13-201ENST00000231526 TMEM191CA6NGB0 347 aa5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 F8VP50 259 aa5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 TTI1O43156 1089 aa5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 ATP8B1O43520 1251 aa5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 DXOO77932 396 aaKnown RBP5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 GNRH1P01148 92 aa5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 YY1P25490 414 aa5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 PSMA2P25787 234 aa5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 CTNNA2P26232 953 aa5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 RFC1P35251 1148 aaPredicted RBP5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 GNL1P36915 607 aaPredicted RBP5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 CARSP49589 748 aaKnown RBP5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 RGS7P49802 495 aa5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 GABPB1Q06547 395 aaPredicted RBP5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 PDCLQ13371 301 aa5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 TERF2Q15554 542 aa5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 PKN2Q16513 984 aaKnown RBP5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 PPP2R5EQ16537 467 aa5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 SV2CQ496J9 727 aa5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 XKR4Q5GH76 650 aa5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 ZNF618Q5T7W0 954 aa5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 FAM102AQ5T9C2 384 aaPredicted RBP5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 SLC13A5Q86YT5 568 aaPredicted RBP5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 RHOT1Q8IXI2 618 aa5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 CCDC105Q8IYK2 499 aa5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 KRT222Q8N1A0 295 aa5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 EMC1Q8N766 993 aa5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 NKAIN3Q8N8D7 197 aa5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 DEPDC7Q96QD5 511 aa5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 ADAM2Q99965 735 aa5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 TRIM31Q9BZY9 425 aa5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 SNX25Q9H3E2 840 aa5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 FAM124BQ9H5Z6 455 aaPredicted RBP5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 SLC38A7Q9NVC3 462 aa5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 WDR35Q9P2L0 1181 aa5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 EGFL7Q9UHF1 273 aa5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 MTUS1Q9ULD2 1270 aa5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 KIAA1257Q9ULG3 409 aa5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 NFU1Q9UMS0 254 aa5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 UTP11Q9Y3A2 253 aaKnown RBP5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 RALGAPA2Q2PPJ7 1873 aa5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 ARL5CA6NH57 179 aa5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 CASTOR2A6NHX0 329 aa5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 E5RJQ4 531 aa5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 HCRTO43612 131 aa5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 ERBB2P04626 1255 aa5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 HSPA6P17066 643 aa5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 LMO2P25791 158 aa5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 CETN2P41208 172 aa5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 SCNN1GP51170 649 aa5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 CLCNKBP51801 687 aa5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 EPHB4P54760 987 aa5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 TAP1Q03518 808 aa5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 MGAT3Q09327 533 aa5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 GPS2Q13227 327 aa5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 PIGHQ14442 188 aaPredicted RBP5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 STILQ15468 1287 aa5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 TRADDQ15628 312 aa5.64□□□□□ -1.51
TRAPPC13-201ENST00000231526 GOLGA7BQ2TAP0 167 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms