RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 EXTL3O43909 919 aa21.4■■□□□ 1.02
SNX3-201ENST00000230085 MAGEC1O60732 1142 aa21.4■■□□□ 1.02
SNX3-201ENST00000230085 SNUPNO95149 360 aaKnown RBP21.4■■□□□ 1.02
SNX3-201ENST00000230085 CDC25CP30307 473 aa21.4■■□□□ 1.02
SNX3-201ENST00000230085 RGS19P49795 217 aa21.4■■□□□ 1.02
SNX3-201ENST00000230085 ZNF132P52740 706 aa21.4■■□□□ 1.02
SNX3-201ENST00000230085 SLC18A2Q05940 514 aa21.4■■□□□ 1.02
SNX3-201ENST00000230085 TMEM62Q0P6H9 643 aa21.4■■□□□ 1.02
SNX3-201ENST00000230085 AP1B1Q10567 949 aa21.4■■□□□ 1.02
SNX3-201ENST00000230085 LLGL1Q15334 1064 aa21.4■■□□□ 1.02
SNX3-201ENST00000230085 TRIM71Q2Q1W2 868 aaKnown RBP21.4■■□□□ 1.02
SNX3-201ENST00000230085 MUM1Q2TAK8 710 aa21.4■■□□□ 1.02
SNX3-201ENST00000230085 KHDC1Q4VXA5 237 aaKnown RBP21.4■■□□□ 1.02
SNX3-201ENST00000230085 TFDP3Q5H9I0 405 aa21.4■■□□□ 1.02
SNX3-201ENST00000230085 PPIL6Q8IXY8 311 aa21.4■■□□□ 1.02
SNX3-201ENST00000230085 ARHGAP24Q8N264 748 aa21.4■■□□□ 1.02
SNX3-201ENST00000230085 GLIS1Q8NBF1 620 aa21.4■■□□□ 1.02
SNX3-201ENST00000230085 SPDYE1Q8NFV5 336 aaPredicted RBP21.4■■□□□ 1.02
SNX3-201ENST00000230085 YIPF3Q9GZM5 350 aa21.4■■□□□ 1.02
SNX3-201ENST00000230085 FAM192AQ9GZU8 254 aa21.4■■□□□ 1.02
SNX3-201ENST00000230085 GPRC5CQ9NQ84 441 aa21.4■■□□□ 1.02
SNX3-201ENST00000230085 A0A1W2PPM1 405 aa21.39■■□□□ 1.01
SNX3-201ENST00000230085 VTNP04004 478 aa21.39■■□□□ 1.01
SNX3-201ENST00000230085 CALB1P05937 261 aa21.39■■□□□ 1.01
SNX3-201ENST00000230085 THPOP40225 353 aa21.39■■□□□ 1.01
SNX3-201ENST00000230085 ETV4P43268 484 aa21.39■■□□□ 1.01
SNX3-201ENST00000230085 PAPOLAP51003 745 aaKnown RBP21.39■■□□□ 1.01
SNX3-201ENST00000230085 ARL4CP56559 192 aa21.39■■□□□ 1.01
SNX3-201ENST00000230085 AP1ARQ63HQ0 302 aa21.39■■□□□ 1.01
SNX3-201ENST00000230085 EXOC8Q8IYI6 725 aa21.39■■□□□ 1.01
SNX3-201ENST00000230085 ZBED8Q8IZ13 594 aa21.39■■□□□ 1.01
SNX3-201ENST00000230085 POMGNT1Q8WZA1 660 aa21.39■■□□□ 1.01
SNX3-201ENST00000230085 ZNF516Q92618 1163 aa21.39■■□□□ 1.01
SNX3-201ENST00000230085 APBB2Q92870 758 aa21.39■■□□□ 1.01
SNX3-201ENST00000230085 NR1H4Q96RI1 486 aaPredicted RBP21.39■■□□□ 1.01
SNX3-201ENST00000230085 PPP1R12CQ9BZL4 782 aa21.39■■□□□ 1.01
SNX3-201ENST00000230085 HIPK3Q9H422 1215 aa21.39■■□□□ 1.01
SNX3-201ENST00000230085 MANSC1Q9H8J5 431 aa21.39■■□□□ 1.01
SNX3-201ENST00000230085 CKBP12277 381 aa21.38■■□□□ 1.01
SNX3-201ENST00000230085 CD58P19256 250 aa21.38■■□□□ 1.01
SNX3-201ENST00000230085 GLRA2P23416 452 aa21.38■■□□□ 1.01
SNX3-201ENST00000230085 ITGB8P26012 769 aa21.38■■□□□ 1.01
SNX3-201ENST00000230085 NEK3P51956 506 aa21.38■■□□□ 1.01
SNX3-201ENST00000230085 MXRA7P84157 204 aa21.38■■□□□ 1.01
SNX3-201ENST00000230085 ADCY1Q08828 1119 aa21.38■■□□□ 1.01
SNX3-201ENST00000230085 PDIA2Q13087 525 aaKnown RBP21.38■■□□□ 1.01
SNX3-201ENST00000230085 CUL2Q13617 745 aa21.38■■□□□ 1.01
SNX3-201ENST00000230085 PIGHQ14442 188 aaPredicted RBP21.38■■□□□ 1.01
SNX3-201ENST00000230085 PRKD1Q15139 912 aaPredicted RBP21.38■■□□□ 1.01
SNX3-201ENST00000230085 SNX30Q5VWJ9 437 aa21.38■■□□□ 1.01
SNX3-201ENST00000230085 TRIM68Q6AZZ1 485 aa21.38■■□□□ 1.01
SNX3-201ENST00000230085 MFSD7Q6UXD7 560 aa21.38■■□□□ 1.01
SNX3-201ENST00000230085 UBR7Q8N806 425 aa21.38■■□□□ 1.01
SNX3-201ENST00000230085 NAT8LQ8N9F0 302 aa21.38■■□□□ 1.01
SNX3-201ENST00000230085 TTC13Q8NBP0 860 aa21.38■■□□□ 1.01
SNX3-201ENST00000230085 DCAKDQ8WVC6 231 aa21.38■■□□□ 1.01
SNX3-201ENST00000230085 PPP1R16BQ96T49 567 aa21.38■■□□□ 1.01
SNX3-201ENST00000230085 C11orf70Q9BRQ4 267 aa21.38■■□□□ 1.01
SNX3-201ENST00000230085 KCNK13Q9HB14 408 aa21.38■■□□□ 1.01
SNX3-201ENST00000230085 NPHS2Q9NP85 383 aa21.38■■□□□ 1.01
SNX3-201ENST00000230085 PAPOLBQ9NRJ5 636 aaKnown RBP21.38■■□□□ 1.01
SNX3-201ENST00000230085 CNTN3Q9P232 1028 aa21.38■■□□□ 1.01
SNX3-201ENST00000230085 ARHGAP28Q9P2N2 729 aa21.38■■□□□ 1.01
SNX3-201ENST00000230085 AKT3Q9Y243 479 aa21.38■■□□□ 1.01
SNX3-201ENST00000230085 NUMBLQ9Y6R0 609 aa21.38■■□□□ 1.01
SNX3-201ENST00000230085 SPAG6O75602 509 aa21.38■■□□□ 1.01
SNX3-201ENST00000230085 PSMG1O95456 288 aa21.38■■□□□ 1.01
SNX3-201ENST00000230085 PIGRP01833 764 aa21.38■■□□□ 1.01
SNX3-201ENST00000230085 HLA-DRAP01903 254 aa21.38■■□□□ 1.01
SNX3-201ENST00000230085 ADRA1DP25100 572 aa21.38■■□□□ 1.01
SNX3-201ENST00000230085 CDKN2BP42772 138 aa21.38■■□□□ 1.01
SNX3-201ENST00000230085 PPP1R15BQ5SWA1 713 aa21.38■■□□□ 1.01
SNX3-201ENST00000230085 ZNF618Q5T7W0 954 aa21.38■■□□□ 1.01
SNX3-201ENST00000230085 FAM102BQ5T8I3 360 aa21.38■■□□□ 1.01
SNX3-201ENST00000230085 SH2D5Q6ZV89 423 aa21.38■■□□□ 1.01
SNX3-201ENST00000230085 MCPH1Q8NEM0 835 aa21.38■■□□□ 1.01
SNX3-201ENST00000230085 TEKT4Q8WW24 435 aa21.38■■□□□ 1.01
SNX3-201ENST00000230085 GATA6Q92908 595 aa21.38■■□□□ 1.01
SNX3-201ENST00000230085 ZNF668Q96K58 619 aaPredicted RBP21.38■■□□□ 1.01
SNX3-201ENST00000230085 ZNF518BQ9C0D4 1074 aa21.38■■□□□ 1.01
SNX3-201ENST00000230085 SCOCQ9UIL1 159 aa21.38■■□□□ 1.01
SNX3-201ENST00000230085 EME2A4GXA9 379 aaPredicted RBP21.37■■□□□ 1.01
SNX3-201ENST00000230085 HGSO14964 777 aaPredicted RBP21.37■■□□□ 1.01
SNX3-201ENST00000230085 DLDP09622 509 aaKnown RBP21.37■■□□□ 1.01
SNX3-201ENST00000230085 CTSHP09668 335 aa21.37■■□□□ 1.01
SNX3-201ENST00000230085 KPNB1Q14974 876 aaKnown RBP21.37■■□□□ 1.01
SNX3-201ENST00000230085 ACSBG2Q5FVE4 666 aa21.37■■□□□ 1.01
SNX3-201ENST00000230085 TMEM154Q6P9G4 183 aa21.37■■□□□ 1.01
SNX3-201ENST00000230085 LRRC74BQ6ZQY2 392 aa21.37■■□□□ 1.01
SNX3-201ENST00000230085 PRPF31Q8WWY3 499 aaKnown RBP21.37■■□□□ 1.01
SNX3-201ENST00000230085 PAFAH2Q99487 392 aa21.37■■□□□ 1.01
SNX3-201ENST00000230085 TSSK1BQ9BXA7 367 aa21.37■■□□□ 1.01
SNX3-201ENST00000230085 PDP2Q9P2J9 529 aa21.37■■□□□ 1.01
SNX3-201ENST00000230085 MAGEA13PA6NCF6 341 aa21.36■■□□□ 1.01
SNX3-201ENST00000230085 KIAA0355O15063 1070 aa21.36■■□□□ 1.01
SNX3-201ENST00000230085 GAS2O43903 313 aaKnown RBP21.36■■□□□ 1.01
SNX3-201ENST00000230085 KRT1P04264 644 aa21.36■■□□□ 1.01
SNX3-201ENST00000230085 SYN1P17600 705 aa21.36■■□□□ 1.01
SNX3-201ENST00000230085 CDH5P33151 784 aaPredicted RBP21.36■■□□□ 1.01
SNX3-201ENST00000230085 CYP2C18P33260 490 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms