RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 LPXNO60711 386 aa22.85■■□□□ 1.25
SMARCD2-201ENST00000225742 GRAP2O75791 330 aa22.85■■□□□ 1.25
SMARCD2-201ENST00000225742 NR2C2P49116 596 aa22.85■■□□□ 1.25
SMARCD2-201ENST00000225742 YWHAZP63104 245 aaKnown RBP22.85■■□□□ 1.25
SMARCD2-201ENST00000225742 KBTBD12Q3ZCT8 623 aa22.85■■□□□ 1.25
SMARCD2-201ENST00000225742 RAB6CQ53S08 254 aa22.85■■□□□ 1.25
SMARCD2-201ENST00000225742 RAB6CQ9H0N0 254 aa22.85■■□□□ 1.25
SMARCD2-201ENST00000225742 ETNK1Q9HBU6 452 aa22.85■■□□□ 1.25
SMARCD2-201ENST00000225742 SAR1AQ9NR31 198 aa22.85■■□□□ 1.25
SMARCD2-201ENST00000225742 ETNK2Q9NVF9 386 aa22.85■■□□□ 1.25
SMARCD2-201ENST00000225742 RNF181Q9P0P0 153 aa22.85■■□□□ 1.25
SMARCD2-201ENST00000225742 SNX9Q9Y5X1 595 aa22.85■■□□□ 1.25
SMARCD2-201ENST00000225742 UNCXA6NJT0 531 aa22.84■■□□□ 1.25
SMARCD2-201ENST00000225742 PIK3R2O00459 728 aa22.84■■□□□ 1.25
SMARCD2-201ENST00000225742 PAPSS1O43252 624 aaPredicted RBP22.84■■□□□ 1.25
SMARCD2-201ENST00000225742 GJA5P36382 358 aa22.84■■□□□ 1.25
SMARCD2-201ENST00000225742 ADCYAP1R1P41586 468 aa22.84■■□□□ 1.25
SMARCD2-201ENST00000225742 RPL34P49207 117 aaKnown RBP22.84■■□□□ 1.25
SMARCD2-201ENST00000225742 SH2D5Q6ZV89 423 aa22.84■■□□□ 1.25
SMARCD2-201ENST00000225742 CENPIQ92674 756 aaPredicted RBP22.84■■□□□ 1.25
SMARCD2-201ENST00000225742 ADAMTS10Q9H324 1103 aa22.84■■□□□ 1.25
SMARCD2-201ENST00000225742 GOLGB1Q14789 3259 aaKnown RBP22.83■■□□□ 1.25
SMARCD2-201ENST00000225742 GCATO75600 419 aa22.83■■□□□ 1.25
SMARCD2-201ENST00000225742 TGDSO95455 350 aa22.83■■□□□ 1.25
SMARCD2-201ENST00000225742 TPSB2P20231 275 aa22.83■■□□□ 1.25
SMARCD2-201ENST00000225742 PRKCHP24723 683 aa22.83■■□□□ 1.25
SMARCD2-201ENST00000225742 RBL1P28749 1068 aa22.83■■□□□ 1.25
SMARCD2-201ENST00000225742 TPSAB1Q15661 275 aa22.83■■□□□ 1.25
SMARCD2-201ENST00000225742 DPYSL2Q16555 572 aa22.83■■□□□ 1.25
SMARCD2-201ENST00000225742 DUSP28Q4G0W2 176 aa22.83■■□□□ 1.25
SMARCD2-201ENST00000225742 SLC26A9Q7LBE3 791 aa22.83■■□□□ 1.25
SMARCD2-201ENST00000225742 KIF2BQ8N4N8 673 aa22.83■■□□□ 1.25
SMARCD2-201ENST00000225742 TUBB6Q9BUF5 446 aa22.83■■□□□ 1.25
SMARCD2-201ENST00000225742 NRDE2Q9H7Z3 1164 aa22.83■■□□□ 1.25
SMARCD2-201ENST00000225742 GTF2IRD1Q9UHL9 959 aa22.83■■□□□ 1.25
SMARCD2-201ENST00000225742 MCM8Q9UJA3 840 aa22.83■■□□□ 1.25
SMARCD2-201ENST00000225742 TTLL3Q9Y4R7 772 aa22.83■■□□□ 1.25
SMARCD2-201ENST00000225742 KAT6AQ92794 2004 aa22.83■■□□□ 1.24
SMARCD2-201ENST00000225742 KRT37O76014 449 aa22.82■■□□□ 1.24
SMARCD2-201ENST00000225742 SNAI1O95863 264 aaPredicted RBP22.82■■□□□ 1.24
SMARCD2-201ENST00000225742 MMP3P08254 477 aa22.82■■□□□ 1.24
SMARCD2-201ENST00000225742 ACADSBP45954 432 aa22.82■■□□□ 1.24
SMARCD2-201ENST00000225742 HDAC4P56524 1084 aa22.82■■□□□ 1.24
SMARCD2-201ENST00000225742 FAAP100Q0VG06 881 aa22.82■■□□□ 1.24
SMARCD2-201ENST00000225742 DGKDQ16760 1214 aa22.82■■□□□ 1.24
SMARCD2-201ENST00000225742 NLRP9Q7RTR0 991 aa22.82■■□□□ 1.24
SMARCD2-201ENST00000225742 C11orf84Q9BUA3 381 aaPredicted RBP22.82■■□□□ 1.24
SMARCD2-201ENST00000225742 POPDC2Q9HBU9 364 aa22.82■■□□□ 1.24
SMARCD2-201ENST00000225742 GPATCH2LQ9NWQ4 482 aa22.82■■□□□ 1.24
SMARCD2-201ENST00000225742 CNTN3Q9P232 1028 aa22.82■■□□□ 1.24
SMARCD2-201ENST00000225742 SLC17A7Q9P2U7 560 aa22.82■■□□□ 1.24
SMARCD2-201ENST00000225742 MORF4L1Q9UBU8 362 aa22.82■■□□□ 1.24
SMARCD2-201ENST00000225742 HEY1Q9Y5J3 304 aa22.82■■□□□ 1.24
SMARCD2-201ENST00000225742 TRAFD1O14545 582 aaPredicted RBP22.82■■□□□ 1.24
SMARCD2-201ENST00000225742 SNRPAP09012 282 aaKnown RBP22.82■■□□□ 1.24
SMARCD2-201ENST00000225742 FGFR1P11362 822 aa22.82■■□□□ 1.24
SMARCD2-201ENST00000225742 CYP2F1P24903 491 aa22.82■■□□□ 1.24
SMARCD2-201ENST00000225742 HOXA11P31270 313 aaPredicted RBP22.82■■□□□ 1.24
SMARCD2-201ENST00000225742 ETV4P43268 484 aa22.82■■□□□ 1.24
SMARCD2-201ENST00000225742 GCLCP48506 637 aaPredicted RBP22.82■■□□□ 1.24
SMARCD2-201ENST00000225742 BST2Q10589 180 aaKnown RBP22.82■■□□□ 1.24
SMARCD2-201ENST00000225742 NOTUMQ6P988 496 aa22.82■■□□□ 1.24
SMARCD2-201ENST00000225742 LRRC6Q86X45 466 aa22.82■■□□□ 1.24
SMARCD2-201ENST00000225742 TRIM42Q8IWZ5 723 aa22.82■■□□□ 1.24
SMARCD2-201ENST00000225742 CRYBG2Q8N1P7 616 aa22.82■■□□□ 1.24
SMARCD2-201ENST00000225742 ANKRD52Q8NB46 1076 aa22.82■■□□□ 1.24
SMARCD2-201ENST00000225742 SLC10A4Q96EP9 437 aa22.82■■□□□ 1.24
SMARCD2-201ENST00000225742 TRIM55Q9BYV6 548 aa22.82■■□□□ 1.24
SMARCD2-201ENST00000225742 ADAM33Q9BZ11 813 aa22.82■■□□□ 1.24
SMARCD2-201ENST00000225742 EBF2Q9HAK2 575 aa22.82■■□□□ 1.24
SMARCD2-201ENST00000225742 MKS1Q9NXB0 559 aa22.82■■□□□ 1.24
SMARCD2-201ENST00000225742 SNTG2Q9NY99 539 aa22.82■■□□□ 1.24
SMARCD2-201ENST00000225742 ZC3H7BQ9UGR2 993 aaKnown RBP22.82■■□□□ 1.24
SMARCD2-201ENST00000225742 UBQLN1Q9UMX0 589 aaKnown RBP22.82■■□□□ 1.24
SMARCD2-201ENST00000225742 A6NJR5 290 aa22.81■■□□□ 1.24
SMARCD2-201ENST00000225742 KLF11O14901 512 aa22.81■■□□□ 1.24
SMARCD2-201ENST00000225742 CD4P01730 458 aa22.81■■□□□ 1.24
SMARCD2-201ENST00000225742 C1QAP02745 245 aa22.81■■□□□ 1.24
SMARCD2-201ENST00000225742 AXLP30530 894 aa22.81■■□□□ 1.24
SMARCD2-201ENST00000225742 L1CAMP32004 1257 aa22.81■■□□□ 1.24
SMARCD2-201ENST00000225742 BCAT1P54687 386 aa22.81■■□□□ 1.24
SMARCD2-201ENST00000225742 NRLP54845 237 aa22.81■■□□□ 1.24
SMARCD2-201ENST00000225742 IQSEC1Q6DN90 963 aa22.81■■□□□ 1.24
SMARCD2-201ENST00000225742 ALKAL1Q6UXT8 129 aa22.81■■□□□ 1.24
SMARCD2-201ENST00000225742 CATSPER4Q7RTX7 472 aa22.81■■□□□ 1.24
SMARCD2-201ENST00000225742 CAND1Q86VP6 1230 aaKnown RBP22.81■■□□□ 1.24
SMARCD2-201ENST00000225742 SCUBE3Q8IX30 993 aa22.81■■□□□ 1.24
SMARCD2-201ENST00000225742 OR6B3Q8NGW1 331 aa22.81■■□□□ 1.24
SMARCD2-201ENST00000225742 MTBPQ96DY7 904 aa22.81■■□□□ 1.24
SMARCD2-201ENST00000225742 CFAP36Q96G28 342 aa22.81■■□□□ 1.24
SMARCD2-201ENST00000225742 L3MBTL3Q96JM7 780 aaPredicted RBP22.81■■□□□ 1.24
SMARCD2-201ENST00000225742 SERAC1Q96JX3 654 aa22.81■■□□□ 1.24
SMARCD2-201ENST00000225742 ZMAT2Q96NC0 199 aaKnown RBP22.81■■□□□ 1.24
SMARCD2-201ENST00000225742 FAM49BQ9NUQ9 324 aa22.81■■□□□ 1.24
SMARCD2-201ENST00000225742 RPL26L1Q9UNX3 145 aaKnown RBP22.81■■□□□ 1.24
SMARCD2-201ENST00000225742 SCN1AP35498 2009 aa22.81■■□□□ 1.24
SMARCD2-201ENST00000225742 MAGEA3P43357 314 aa22.8■■□□□ 1.24
SMARCD2-201ENST00000225742 CA9Q16790 459 aa22.8■■□□□ 1.24
SMARCD2-201ENST00000225742 C9orf57Q5W0N0 161 aa22.8■■□□□ 1.24
SMARCD2-201ENST00000225742 VPS52Q8N1B4 723 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms