RNA–Protein interactions for RNA: ENST00000225576.7

TVP23C-201, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-201ENST00000225576 SNRNP25Q9BV90 132 aaKnown RBP17.52■□□□□ 0.4
TVP23C-201ENST00000225576 CWH43Q9H720 699 aa17.52■□□□□ 0.4
TVP23C-201ENST00000225576 PRDM5Q9NQX1 630 aaPredicted RBP17.52■□□□□ 0.4
TVP23C-201ENST00000225576 DNAH12Q6ZR08 3092 aa17.52■□□□□ 0.39
TVP23C-201ENST00000225576 NT5C1B-RDH14C9J2C7 533 aa17.52■□□□□ 0.39
TVP23C-201ENST00000225576 DAPK3O43293 454 aa17.52■□□□□ 0.39
TVP23C-201ENST00000225576 LIASO43766 372 aa17.52■□□□□ 0.39
TVP23C-201ENST00000225576 FYNP06241 537 aa17.52■□□□□ 0.39
TVP23C-201ENST00000225576 CD48P09326 243 aa17.52■□□□□ 0.39
TVP23C-201ENST00000225576 GBP1P32455 592 aa17.52■□□□□ 0.39
TVP23C-201ENST00000225576 GRIK1P39086 918 aa17.52■□□□□ 0.39
TVP23C-201ENST00000225576 MAGEA11P43364 429 aa17.52■□□□□ 0.39
TVP23C-201ENST00000225576 LMNB2Q03252 620 aa17.52■□□□□ 0.39
TVP23C-201ENST00000225576 DPYSL3Q14195 570 aa17.52■□□□□ 0.39
TVP23C-201ENST00000225576 SYPL2Q5VXT5 272 aa17.52■□□□□ 0.39
TVP23C-201ENST00000225576 ANKS3Q6ZW76 656 aa17.52■□□□□ 0.39
TVP23C-201ENST00000225576 BEND5Q7L4P6 421 aa17.52■□□□□ 0.39
TVP23C-201ENST00000225576 TMEM173Q86WV6 379 aaPredicted RBP17.52■□□□□ 0.39
TVP23C-201ENST00000225576 PSTKQ8IV42 348 aaKnown RBP17.52■□□□□ 0.39
TVP23C-201ENST00000225576 ZNF689Q96CS4 500 aaPredicted RBP17.52■□□□□ 0.39
TVP23C-201ENST00000225576 C8orf48Q96LL4 319 aa17.52■□□□□ 0.39
TVP23C-201ENST00000225576 TTPALQ9BTX7 342 aa17.52■□□□□ 0.39
TVP23C-201ENST00000225576 TRIM62Q9BVG3 475 aa17.52■□□□□ 0.39
TVP23C-201ENST00000225576 DRG1Q9Y295 367 aaKnown RBP17.52■□□□□ 0.39
TVP23C-201ENST00000225576 PCDHB5Q9Y5E4 795 aa17.52■□□□□ 0.39
TVP23C-201ENST00000225576 MICAL3Q7RTP6 2002 aa17.51■□□□□ 0.39
TVP23C-201ENST00000225576 TNFRSF10BO14763 440 aa17.51■□□□□ 0.39
TVP23C-201ENST00000225576 CAPN9O14815 690 aa17.51■□□□□ 0.39
TVP23C-201ENST00000225576 CST8O60676 142 aa17.51■□□□□ 0.39
TVP23C-201ENST00000225576 SASH3O75995 380 aa17.51■□□□□ 0.39
TVP23C-201ENST00000225576 GAS8O95995 478 aa17.51■□□□□ 0.39
TVP23C-201ENST00000225576 ECHS1P30084 290 aa17.51■□□□□ 0.39
TVP23C-201ENST00000225576 TFDP2Q14188 446 aa17.51■□□□□ 0.39
TVP23C-201ENST00000225576 HLTFQ14527 1009 aaKnown RBP eCLIP17.51■□□□□ 0.39
TVP23C-201ENST00000225576 KRT81Q14533 505 aa17.51■□□□□ 0.39
TVP23C-201ENST00000225576 CASP8Q14790 479 aa17.51■□□□□ 0.39
TVP23C-201ENST00000225576 DPYSL2Q16555 572 aa17.51■□□□□ 0.39
TVP23C-201ENST00000225576 OTUD1Q5VV17 481 aaPredicted RBP17.51■□□□□ 0.39
TVP23C-201ENST00000225576 DDX42Q86XP3 938 aaKnown RBP eCLIP17.51■□□□□ 0.392e-7■■■■■ 34.5
TVP23C-201ENST00000225576 BCL7CQ8WUZ0 217 aaPredicted RBP17.51■□□□□ 0.39
TVP23C-201ENST00000225576 NKD2Q969F2 451 aaPredicted RBP17.51■□□□□ 0.39
TVP23C-201ENST00000225576 PGAP3Q96FM1 320 aaPredicted RBP17.51■□□□□ 0.39
TVP23C-201ENST00000225576 CALN1Q9BXU9 219 aa17.51■□□□□ 0.39
TVP23C-201ENST00000225576 ABI2Q9NYB9 513 aaPredicted RBP17.51■□□□□ 0.39
TVP23C-201ENST00000225576 NAALADL1Q9UQQ1 740 aa17.51■□□□□ 0.39
TVP23C-201ENST00000225576 CARNS1A5YM72 827 aa17.5■□□□□ 0.39
TVP23C-201ENST00000225576 M0QYT0 321 aa17.5■□□□□ 0.39
TVP23C-201ENST00000225576 TRIM66O15016 1216 aa17.5■□□□□ 0.39
TVP23C-201ENST00000225576 BAIAP3O94812 1187 aa17.5■□□□□ 0.39
TVP23C-201ENST00000225576 RDXP35241 583 aaKnown RBP17.5■□□□□ 0.39
TVP23C-201ENST00000225576 PBX3P40426 434 aa17.5■□□□□ 0.39
TVP23C-201ENST00000225576 SLC5A3P53794 718 aa17.5■□□□□ 0.39
TVP23C-201ENST00000225576 ATXN1P54253 815 aaKnown RBP17.5■□□□□ 0.39
TVP23C-201ENST00000225576 GPR17Q13304 367 aa17.5■□□□□ 0.39
TVP23C-201ENST00000225576 BYSLQ13895 437 aaKnown RBP17.5■□□□□ 0.39
TVP23C-201ENST00000225576 PPP1R7Q15435 360 aa17.5■□□□□ 0.39
TVP23C-201ENST00000225576 ZC3H12AQ5D1E8 599 aaKnown RBP17.5■□□□□ 0.39
TVP23C-201ENST00000225576 RTP2Q5QGT7 225 aa17.5■□□□□ 0.39
TVP23C-201ENST00000225576 RFX6Q8HWS3 928 aa17.5■□□□□ 0.39
TVP23C-201ENST00000225576 FAF2Q96CS3 445 aa17.5■□□□□ 0.39
TVP23C-201ENST00000225576 IGSF21Q96ID5 467 aa17.5■□□□□ 0.39
TVP23C-201ENST00000225576 RNF157Q96PX1 679 aa17.5■□□□□ 0.39
TVP23C-201ENST00000225576 SLC9A7Q96T83 725 aa17.5■□□□□ 0.39
TVP23C-201ENST00000225576 ZNF670Q9BS34 389 aa17.5■□□□□ 0.39
TVP23C-201ENST00000225576 MAK16Q9BXY0 300 aaKnown RBP17.5■□□□□ 0.39
TVP23C-201ENST00000225576 FAM129AQ9BZQ8 928 aa17.5■□□□□ 0.39
TVP23C-201ENST00000225576 DPH5Q9H2P9 285 aa17.5■□□□□ 0.39
TVP23C-201ENST00000225576 VIPAS39Q9H9C1 493 aa17.5■□□□□ 0.39
TVP23C-201ENST00000225576 RC3H2Q9HBD1 1191 aaKnown RBP17.5■□□□□ 0.39
TVP23C-201ENST00000225576 PCDH18Q9HCL0 1135 aa17.5■□□□□ 0.39
TVP23C-201ENST00000225576 GPATCH2LQ9NWQ4 482 aa17.5■□□□□ 0.39
TVP23C-201ENST00000225576 FAM53CQ9NYF3 392 aa17.5■□□□□ 0.39
TVP23C-201ENST00000225576 CALCOCO1Q9P1Z2 691 aa17.5■□□□□ 0.39
TVP23C-201ENST00000225576 TNRC18O15417 2968 aaPredicted RBP17.5■□□□□ 0.39
TVP23C-201ENST00000225576 FNDC1Q4ZHG4 1894 aaPredicted RBP17.49■□□□□ 0.39
TVP23C-201ENST00000225576 APOC4-APOC2K7ER74 178 aa17.49■□□□□ 0.39
TVP23C-201ENST00000225576 APOC2P02655 101 aa17.49■□□□□ 0.39
TVP23C-201ENST00000225576 NCAM1P13591 858 aa17.49■□□□□ 0.39
TVP23C-201ENST00000225576 IL4RP24394 825 aa17.49■□□□□ 0.39
TVP23C-201ENST00000225576 L1CAMP32004 1257 aa17.49■□□□□ 0.39
TVP23C-201ENST00000225576 TNNT3P45378 269 aaPredicted RBP17.49■□□□□ 0.39
TVP23C-201ENST00000225576 WDR5P61964 334 aaKnown RBP17.49■□□□□ 0.39
TVP23C-201ENST00000225576 DEFB103AP81534 67 aa17.49■□□□□ 0.39
TVP23C-201ENST00000225576 KRT17Q04695 432 aa17.49■□□□□ 0.39
TVP23C-201ENST00000225576 DEUP1Q05D60 604 aa17.49■□□□□ 0.39
TVP23C-201ENST00000225576 PTK6Q13882 451 aa17.49■□□□□ 0.39
TVP23C-201ENST00000225576 CA9Q16790 459 aa17.49■□□□□ 0.39
TVP23C-201ENST00000225576 BSPRYQ5W0U4 402 aa17.49■□□□□ 0.39
TVP23C-201ENST00000225576 SND1Q7KZF4 910 aaKnown RBP eCLIP17.49■□□□□ 0.39
TVP23C-201ENST00000225576 TAS1R1Q7RTX1 841 aa17.49■□□□□ 0.39
TVP23C-201ENST00000225576 UBE2Q1Q7Z7E8 422 aa17.49■□□□□ 0.39
TVP23C-201ENST00000225576 CMTR2Q8IYT2 770 aaKnown RBP17.49■□□□□ 0.39
TVP23C-201ENST00000225576 RNF168Q8IYW5 571 aaPredicted RBP17.49■□□□□ 0.39
TVP23C-201ENST00000225576 SLC35B2Q8TB61 432 aa17.49■□□□□ 0.39
TVP23C-201ENST00000225576 C2orf15Q8WU43 125 aaKnown RBP17.49■□□□□ 0.39
TVP23C-201ENST00000225576 B3GALT6Q96L58 329 aa17.49■□□□□ 0.39
TVP23C-201ENST00000225576 TRIM31Q9BZY9 425 aa17.49■□□□□ 0.39
TVP23C-201ENST00000225576 FZD10Q9ULW2 581 aa17.49■□□□□ 0.39
TVP23C-201ENST00000225576 AP4E1Q9UPM8 1137 aa17.49■□□□□ 0.39
TVP23C-201ENST00000225576 NEU2Q9Y3R4 380 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms