RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 UNKQ9C0B0 810 aaKnown RBP11.43□□□□□ -0.58
KNOP1-201ENST00000219837 SETD4Q9NVD3 440 aa11.43□□□□□ -0.58
KNOP1-201ENST00000219837 FBXO28Q9NVF7 368 aa11.43□□□□□ -0.58
KNOP1-201ENST00000219837 GPRC5DQ9NZD1 345 aa11.43□□□□□ -0.58
KNOP1-201ENST00000219837 TRPC4Q9UBN4 977 aa11.43□□□□□ -0.58
KNOP1-201ENST00000219837 TAL1P17542 331 aaPredicted RBP11.43□□□□□ -0.58
KNOP1-201ENST00000219837 TSGA10IPQ3SY00 556 aa11.43□□□□□ -0.58
KNOP1-201ENST00000219837 TRAF7Q6Q0C0 670 aa11.43□□□□□ -0.58
KNOP1-201ENST00000219837 USP38Q8NB14 1042 aa11.43□□□□□ -0.58
KNOP1-201ENST00000219837 MTFMTQ96DP5 389 aaKnown RBP11.43□□□□□ -0.58
KNOP1-201ENST00000219837 SGSM3Q96HU1 749 aa11.43□□□□□ -0.58
KNOP1-201ENST00000219837 ACOX2Q99424 681 aa11.43□□□□□ -0.58
KNOP1-201ENST00000219837 OSMRQ99650 979 aa11.43□□□□□ -0.58
KNOP1-201ENST00000219837 ATXN3LQ9H3M9 355 aa11.43□□□□□ -0.58
KNOP1-201ENST00000219837 TBC1D13Q9NVG8 400 aa11.43□□□□□ -0.58
KNOP1-201ENST00000219837 POLLQ9UGP5 575 aa11.43□□□□□ -0.58
KNOP1-201ENST00000219837 TIMM13Q9Y5L4 95 aaPredicted RBP11.43□□□□□ -0.58
KNOP1-201ENST00000219837 GPR75-ASB3A0A0A6YYF3 556 aa11.43□□□□□ -0.58
KNOP1-201ENST00000219837 LOC100653049A0A140TA62 436 aa11.43□□□□□ -0.58
KNOP1-201ENST00000219837 KRT34O76011 436 aa11.43□□□□□ -0.58
KNOP1-201ENST00000219837 CSF1RP07333 972 aa11.43□□□□□ -0.58
KNOP1-201ENST00000219837 HNRNPCP07910 306 aaKnown RBP eCLIP11.43□□□□□ -0.58
KNOP1-201ENST00000219837 COPAP53621 1224 aa11.43□□□□□ -0.58
KNOP1-201ENST00000219837 CSNK2BP67870 215 aa11.43□□□□□ -0.58
KNOP1-201ENST00000219837 OVGP1Q12889 678 aa11.43□□□□□ -0.58
KNOP1-201ENST00000219837 WDR49Q8IV35 697 aa11.43□□□□□ -0.58
KNOP1-201ENST00000219837 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.43□□□□□ -0.58
KNOP1-201ENST00000219837 MIEF1Q9NQG6 463 aa11.43□□□□□ -0.58
KNOP1-201ENST00000219837 PPIEQ9UNP9 301 aaKnown RBP11.43□□□□□ -0.58
KNOP1-201ENST00000219837 RPS6KL1Q9Y6S9 549 aa11.43□□□□□ -0.58
KNOP1-201ENST00000219837 BCORL1Q5H9F3 1711 aa11.43□□□□□ -0.58
KNOP1-201ENST00000219837 NKRFO15226 690 aaKnown RBP eCLIP11.43□□□□□ -0.58
KNOP1-201ENST00000219837 NDUFS2O75306 463 aa11.43□□□□□ -0.58
KNOP1-201ENST00000219837 KATNA1O75449 491 aa11.43□□□□□ -0.58
KNOP1-201ENST00000219837 GYS1P13807 737 aa11.43□□□□□ -0.58
KNOP1-201ENST00000219837 CYP2A7P20853 494 aa11.43□□□□□ -0.58
KNOP1-201ENST00000219837 GRK4P32298 578 aa11.43□□□□□ -0.58
KNOP1-201ENST00000219837 NUP62P37198 522 aaPredicted RBP11.43□□□□□ -0.58
KNOP1-201ENST00000219837 ITGA9Q13797 1035 aa11.43□□□□□ -0.58
KNOP1-201ENST00000219837 CAMKK1Q8N5S9 505 aa11.43□□□□□ -0.58
KNOP1-201ENST00000219837 SLC20A1Q8WUM9 679 aa11.43□□□□□ -0.58
KNOP1-201ENST00000219837 C17orf75Q9HAS0 396 aa11.43□□□□□ -0.58
KNOP1-201ENST00000219837 ZFYVE1Q9HBF4 777 aa11.43□□□□□ -0.58
KNOP1-201ENST00000219837 AP4E1Q9UPM8 1137 aa11.43□□□□□ -0.58
KNOP1-201ENST00000219837 RIMS1Q86UR5 1692 aaKnown RBP11.43□□□□□ -0.58
KNOP1-201ENST00000219837 A0A087WZ62 844 aa11.42□□□□□ -0.58
KNOP1-201ENST00000219837 SDR42E2A6NKP2 422 aa11.42□□□□□ -0.58
KNOP1-201ENST00000219837 M0R3G1 203 aa11.42□□□□□ -0.58
KNOP1-201ENST00000219837 SOX10P56693 466 aa11.42□□□□□ -0.58
KNOP1-201ENST00000219837 AMPD2Q01433 879 aa11.42□□□□□ -0.58
KNOP1-201ENST00000219837 KBTBD12Q3ZCT8 623 aa11.42□□□□□ -0.58
KNOP1-201ENST00000219837 Q4G0T1 1027 aa11.42□□□□□ -0.58
KNOP1-201ENST00000219837 LLGL2Q6P1M3 1020 aa11.42□□□□□ -0.58
KNOP1-201ENST00000219837 ACER1Q8TDN7 264 aa11.42□□□□□ -0.58
KNOP1-201ENST00000219837 PRMT6Q96LA8 375 aaPredicted RBP11.42□□□□□ -0.58
KNOP1-201ENST00000219837 UBP1Q9NZI7 540 aa11.42□□□□□ -0.58
KNOP1-201ENST00000219837 SEPT3Q9UH03 358 aa11.42□□□□□ -0.58
KNOP1-201ENST00000219837 MRPL42Q9Y6G3 142 aaKnown RBP11.42□□□□□ -0.58
KNOP1-201ENST00000219837 SNCAIPQ9Y6H5 919 aa11.42□□□□□ -0.58
KNOP1-201ENST00000219837 USP42Q9H9J4 1324 aaKnown RBP11.42□□□□□ -0.58
KNOP1-201ENST00000219837 FXR1P51114 621 aaKnown RBP eCLIP11.42□□□□□ -0.58
KNOP1-201ENST00000219837 DEFA1P59665 94 aa11.42□□□□□ -0.58
KNOP1-201ENST00000219837 DEFA3P59666 94 aa11.42□□□□□ -0.58
KNOP1-201ENST00000219837 PRKAA1Q13131 559 aa11.42□□□□□ -0.58
KNOP1-201ENST00000219837 GRB10Q13322 594 aa11.42□□□□□ -0.58
KNOP1-201ENST00000219837 TTC33Q6PID6 262 aaPredicted RBP11.42□□□□□ -0.58
KNOP1-201ENST00000219837 LRRC8DQ7L1W4 858 aa11.42□□□□□ -0.58
KNOP1-201ENST00000219837 TRPM8Q7Z2W7 1104 aa11.42□□□□□ -0.58
KNOP1-201ENST00000219837 ERO1BQ86YB8 467 aa11.42□□□□□ -0.58
KNOP1-201ENST00000219837 MRPL48Q96GC5 212 aaKnown RBP11.42□□□□□ -0.58
KNOP1-201ENST00000219837 PGLYRP2Q96PD5 576 aa11.42□□□□□ -0.58
KNOP1-201ENST00000219837 MRGBPQ9NV56 204 aa11.42□□□□□ -0.58
KNOP1-201ENST00000219837 CTNNAL1Q9UBT7 734 aa11.42□□□□□ -0.58
KNOP1-201ENST00000219837 DRG1Q9Y295 367 aaKnown RBP11.42□□□□□ -0.58
KNOP1-201ENST00000219837 SNTNA6NMZ2 147 aa11.42□□□□□ -0.58
KNOP1-201ENST00000219837 ANTXR2P58335 489 aa11.42□□□□□ -0.58
KNOP1-201ENST00000219837 BST2Q10589 180 aaKnown RBP11.42□□□□□ -0.58
KNOP1-201ENST00000219837 CYLC2Q14093 348 aaPredicted RBP11.42□□□□□ -0.58
KNOP1-201ENST00000219837 TRIP10Q15642 601 aa11.42□□□□□ -0.58
KNOP1-201ENST00000219837 ZCCHC8Q6NZY4 707 aaKnown RBP11.42□□□□□ -0.58
KNOP1-201ENST00000219837 SYTL1Q8IYJ3 562 aa11.42□□□□□ -0.58
KNOP1-201ENST00000219837 CCDC126Q96EE4 140 aa11.42□□□□□ -0.58
KNOP1-201ENST00000219837 FDXACB1Q9BRP7 624 aaPredicted RBP11.42□□□□□ -0.58
KNOP1-201ENST00000219837 IRX2Q9BZI1 471 aaPredicted RBP11.42□□□□□ -0.58
KNOP1-201ENST00000219837 ISCUQ9H1K1 167 aa11.42□□□□□ -0.58
KNOP1-201ENST00000219837 DPP7Q9UHL4 492 aa11.42□□□□□ -0.58
KNOP1-201ENST00000219837 A8MX80 341 aa11.42□□□□□ -0.58
KNOP1-201ENST00000219837 MICAL2O94851 1124 aa11.42□□□□□ -0.58
KNOP1-201ENST00000219837 GARTP22102 1010 aa11.42□□□□□ -0.58
KNOP1-201ENST00000219837 SCNN1BP51168 640 aa11.42□□□□□ -0.58
KNOP1-201ENST00000219837 RENBPP51606 427 aa11.42□□□□□ -0.58
KNOP1-201ENST00000219837 GRIK3Q13003 919 aa11.42□□□□□ -0.58
KNOP1-201ENST00000219837 DENND1BQ6P3S1 775 aa11.42□□□□□ -0.58
KNOP1-201ENST00000219837 ATG4AQ8WYN0 398 aa11.42□□□□□ -0.58
KNOP1-201ENST00000219837 MTERF3Q96E29 417 aa11.42□□□□□ -0.58
KNOP1-201ENST00000219837 MAP3K14Q99558 947 aa11.42□□□□□ -0.58
KNOP1-201ENST00000219837 MKNK1Q9BUB5 465 aa11.42□□□□□ -0.58
KNOP1-201ENST00000219837 ITGA11Q9UKX5 1188 aa11.42□□□□□ -0.58
KNOP1-201ENST00000219837 PPP1R3GB7ZBB8 358 aa11.42□□□□□ -0.58
KNOP1-201ENST00000219837 DLGAP3O95886 979 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms