RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 GPD1LQ8N335 351 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 DNAAF1Q8NEP3 725 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 ZNF563Q8TA94 476 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 CNOT6LQ96LI5 555 aaKnown RBP3.55□□□□□ -1.84
NEB-201ENST00000172853 OPA3Q9H6K4 179 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 RRAGCQ9HB90 399 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 PARVAQ9NVD7 372 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 XPR1Q9UBH6 696 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 KIF1BO60333 1816 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 GNG14A0A1W2PPG7 69 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 OR10H2O60403 315 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 WEE1P30291 646 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 RCVRNP35243 200 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 HSPA9P38646 679 aaKnown RBP3.55□□□□□ -1.84
NEB-201ENST00000172853 ALDH5A1P51649 535 aaPredicted RBP3.55□□□□□ -1.84
NEB-201ENST00000172853 SLC29A2Q14542 456 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 EIF2S3LQ2VIR3 472 aaKnown RBP3.55□□□□□ -1.84
NEB-201ENST00000172853 ARMC3Q5W041 872 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 NAPEPLDQ6IQ20 393 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 FBXO33Q7Z6M2 555 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 ARHGEF26Q96DR7 871 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 EMILIN3Q9NT22 766 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 PCDHGC3Q9UN70 934 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 SNX7Q9UNH6 387 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 ABCC12Q96J65 1359 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 TFPIP10646 304 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 STAT5AP42229 794 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 PLA2G4AP47712 749 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 SGCBQ16585 318 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 LIN54Q6MZP7 749 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 CLMNQ96JQ2 1002 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 TESK2Q96S53 571 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 PITPNM3Q9BZ71 974 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 CNOT8Q9UFF9 292 aaKnown RBP3.55□□□□□ -1.84
NEB-201ENST00000172853 PRKAG3Q9UGI9 489 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 DNPEPQ9ULA0 475 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 PCDHA10Q9Y5I2 948 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 TNKSO95271 1327 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 SLC28A1O00337 649 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 TNFRSF10BO14763 440 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 NR3C2P08235 984 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 RHOAP61586 193 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 PDK1Q15118 436 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 KLHL26Q53HC5 615 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 FAXCQ5TGI0 409 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 MRNIPQ6NTE8 343 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 ZCCHC7Q8N3Z6 543 aaKnown RBP3.55□□□□□ -1.84
NEB-201ENST00000172853 XXYLT1Q8NBI6 393 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 IPCEF1Q8WWN9 437 aaPredicted RBP3.55□□□□□ -1.84
NEB-201ENST00000172853 TMEM68Q96MH6 324 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 CLPBQ9H078 707 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 PABPC3Q9H361 631 aaKnown RBP3.55□□□□□ -1.84
NEB-201ENST00000172853 RBAKQ9NYW8 714 aaPredicted RBP3.55□□□□□ -1.84
NEB-201ENST00000172853 MED23Q9ULK4 1368 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 ATP9AO75110 1047 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 GFPT2O94808 682 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 SERPINB9P50453 376 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 ATXN1P54253 815 aaKnown RBP3.55□□□□□ -1.84
NEB-201ENST00000172853 GNGT1P63211 74 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 MYBPC2Q14324 1141 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 DNAL1Q4LDG9 190 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 RNF44Q7L0R7 432 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 GIT1Q9Y2X7 761 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 GRIN2DO15399 1336 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 UGGT1Q9NYU2 1555 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 hCG_1642624A0A1W2PR95 340 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 IGF2BP3O00425 579 aaKnown RBP eCLIP3.55□□□□□ -1.84
NEB-201ENST00000172853 SCN2BO60939 215 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 ZC3H11AO75152 810 aaKnown RBP eCLIP3.55□□□□□ -1.84
NEB-201ENST00000172853 KCNA5P22460 613 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 TRAP1Q12931 704 aaKnown RBP3.55□□□□□ -1.84
NEB-201ENST00000172853 SGO1Q5FBB7 561 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 INTS11Q5TA45 600 aaKnown RBP3.55□□□□□ -1.84
NEB-201ENST00000172853 CD302Q8IX05 232 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 HDHD2Q9H0R4 259 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 PSMD11O00231 422 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 SLC27A2O14975 620 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 GRAP2O75791 330 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 GH2P01242 217 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 TPH1P17752 444 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 CHMP24386 653 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 ITGA1P56199 1179 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 INSCQ1MX18 579 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 ATCAYQ86WG3 371 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 BRSK2Q8IWQ3 736 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 FIBCD1Q8N539 461 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 UXS1Q8NBZ7 420 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 ZKSCAN4Q969J2 545 aaPredicted RBP3.55□□□□□ -1.84
NEB-201ENST00000172853 CLIP3Q96DZ5 547 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 RADILQ96JH8 1075 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 EFCAB1Q9HAE3 211 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 SEC31BQ9NQW1 1179 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.55□□□□□ -1.84
NEB-201ENST00000172853 GABBR1Q9UBS5 961 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 FAM170AA1A519 330 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 TMEM114B3SHH9 223 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 G3V2T6 193 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 POLRMTO00411 1230 aaKnown RBP3.55□□□□□ -1.84
NEB-201ENST00000172853 TCF7P36402 384 aaPredicted RBP3.55□□□□□ -1.84
NEB-201ENST00000172853 TUFMP49411 452 aaKnown RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms